RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 CD109Q6YHK3 1445 aa12.09□□□□□ -0.47
SHQ1-203ENST00000463369 ZBTB7CA1YPR0 619 aa12.09□□□□□ -0.47
SHQ1-203ENST00000463369 ITGAEP38570 1179 aa12.09□□□□□ -0.47
SHQ1-203ENST00000463369 VASPP50552 380 aaPredicted RBP12.09□□□□□ -0.47
SHQ1-203ENST00000463369 PPRC1Q5VV67 1664 aaKnown RBP12.08□□□□□ -0.48
SHQ1-203ENST00000463369 ZNF777Q9ULD5 760 aaPredicted RBP12.08□□□□□ -0.48
SHQ1-203ENST00000463369 ARHGEF5Q12774 1597 aa12.08□□□□□ -0.48
SHQ1-203ENST00000463369 EFCAB2Q5VUJ9 269 aa12.07□□□□□ -0.48
SHQ1-203ENST00000463369 FANCAO15360 1455 aa12.07□□□□□ -0.48
SHQ1-203ENST00000463369 PLEKHH2Q8IVE3 1493 aa12.06□□□□□ -0.48
SHQ1-203ENST00000463369 FAM69CQ0P6D2 419 aa12.06□□□□□ -0.48
SHQ1-203ENST00000463369 ADGBQ8N7X0 1667 aa12.06□□□□□ -0.48
SHQ1-203ENST00000463369 ABCC1P33527 1531 aa12.06□□□□□ -0.48
SHQ1-203ENST00000463369 KIAA1107Q9UPP5 1409 aa12.05□□□□□ -0.48
SHQ1-203ENST00000463369 SYCP2Q9BX26 1530 aa12.05□□□□□ -0.48
SHQ1-203ENST00000463369 MBD5Q9P267 1494 aa12.05□□□□□ -0.48
SHQ1-203ENST00000463369 DAPK1P53355 1430 aa12.05□□□□□ -0.48
SHQ1-203ENST00000463369 PTPRKQ15262 1439 aa12.04□□□□□ -0.48
SHQ1-203ENST00000463369 DEKP35659 375 aaKnown RBP12.04□□□□□ -0.48
SHQ1-203ENST00000463369 C1orf115Q9H7X2 142 aa12.04□□□□□ -0.48
SHQ1-203ENST00000463369 ABCC5O15440 1437 aa12.03□□□□□ -0.48
SHQ1-203ENST00000463369 HSP90B1P14625 803 aaKnown RBP12.03□□□□□ -0.48
SHQ1-203ENST00000463369 NEO1Q92859 1461 aa12.03□□□□□ -0.48
SHQ1-203ENST00000463369 ARHGEF12Q9NZN5 1544 aa12.03□□□□□ -0.48
SHQ1-203ENST00000463369 RSPH4AQ5TD94 716 aa12.02□□□□□ -0.48
SHQ1-203ENST00000463369 AKNAQ7Z591 1439 aa12.02□□□□□ -0.48
SHQ1-203ENST00000463369 HNRNPMP52272 730 aaKnown RBP eCLIP12.02□□□□□ -0.49
SHQ1-203ENST00000463369 GCC2Q8IWJ2 1684 aa12.01□□□□□ -0.49
SHQ1-203ENST00000463369 ADGRL1O94910 1474 aa12.01□□□□□ -0.49
SHQ1-203ENST00000463369 CCDC141Q6ZP82 1450 aa12.01□□□□□ -0.49
SHQ1-203ENST00000463369 SHANK2Q9UPX8 1470 aa12.01□□□□□ -0.49
SHQ1-203ENST00000463369 MAST1Q9Y2H9 1570 aa12.01□□□□□ -0.49
SHQ1-203ENST00000463369 ZMYND15Q9H091 742 aa11.99□□□□□ -0.49
SHQ1-203ENST00000463369 TEX14Q8IWB6 1497 aa11.99□□□□□ -0.49
SHQ1-203ENST00000463369 RICTORQ6R327 1708 aa11.99□□□□□ -0.49
SHQ1-203ENST00000463369 HMGB1P09429 215 aaKnown RBP11.99□□□□□ -0.49
SHQ1-203ENST00000463369 SCAPERQ9BY12 1400 aa11.99□□□□□ -0.49
SHQ1-203ENST00000463369 ADGRL2O95490 1459 aa11.98□□□□□ -0.49
SHQ1-203ENST00000463369 CCER2I3L3R5 266 aa11.98□□□□□ -0.49
SHQ1-203ENST00000463369 TRAPPC8Q9Y2L5 1435 aa11.98□□□□□ -0.49
SHQ1-203ENST00000463369 ROCK1Q13464 1354 aa11.98□□□□□ -0.49
SHQ1-203ENST00000463369 DDX10Q13206 875 aaKnown RBP11.98□□□□□ -0.49
SHQ1-203ENST00000463369 TSPY4P0CV99 314 aa11.97□□□□□ -0.49
SHQ1-203ENST00000463369 TSPY10P0CW01 314 aa11.97□□□□□ -0.49
SHQ1-203ENST00000463369 RSPH6AQ9H0K4 717 aa11.97□□□□□ -0.49
SHQ1-203ENST00000463369 CHIC2Q9UKJ5 165 aa11.97□□□□□ -0.49
SHQ1-203ENST00000463369 C9orf84Q5VXU9 1444 aa11.97□□□□□ -0.49
SHQ1-203ENST00000463369 TRIM52Q96A61 297 aa11.96□□□□□ -0.49
SHQ1-203ENST00000463369 ANO8Q9HCE9 1232 aaPredicted RBP11.96□□□□□ -0.49
SHQ1-203ENST00000463369 HFM1A2PYH4 1435 aa11.96□□□□□ -0.49
SHQ1-203ENST00000463369 PLXNC1O60486 1568 aa11.96□□□□□ -0.5
SHQ1-203ENST00000463369 SETD5Q9C0A6 1442 aa11.96□□□□□ -0.5
SHQ1-203ENST00000463369 PPP1R15AO75807 674 aaPredicted RBP11.96□□□□□ -0.5
SHQ1-203ENST00000463369 DHX37Q8IY37 1157 aaKnown RBP11.96□□□□□ -0.5
SHQ1-203ENST00000463369 KDM5CP41229 1560 aa11.95□□□□□ -0.5
SHQ1-203ENST00000463369 INO80Q9ULG1 1556 aaPredicted RBP11.95□□□□□ -0.5
SHQ1-203ENST00000463369 KIDINS220Q9ULH0 1771 aa11.95□□□□□ -0.5
SHQ1-203ENST00000463369 NCOA1Q15788 1441 aa11.95□□□□□ -0.5
SHQ1-203ENST00000463369 ZNF518AQ6AHZ1 1483 aa11.95□□□□□ -0.5
SHQ1-203ENST00000463369 NAIPQ13075 1403 aa11.95□□□□□ -0.5
SHQ1-203ENST00000463369 AFAP1Q8N556 730 aa11.94□□□□□ -0.5
SHQ1-203ENST00000463369 ANKRD30AQ9BXX3 1397 aa11.94□□□□□ -0.5
SHQ1-203ENST00000463369 RTEL1-TNFRSF6BF6WH68 1400 aa11.94□□□□□ -0.5
SHQ1-203ENST00000463369 POGZQ7Z3K3 1410 aa11.94□□□□□ -0.5
SHQ1-203ENST00000463369 DENND4BO75064 1496 aaPredicted RBP11.93□□□□□ -0.5
SHQ1-203ENST00000463369 RRP7BPQ9NSQ0 103 aa11.93□□□□□ -0.5
SHQ1-203ENST00000463369 ZFYVE16Q7Z3T8 1539 aa11.93□□□□□ -0.5
SHQ1-203ENST00000463369 ERICH6BQ5W0A0 696 aa11.93□□□□□ -0.5
SHQ1-203ENST00000463369 ATP7AQ04656 1500 aa11.92□□□□□ -0.5
SHQ1-203ENST00000463369 FRMPD1Q5SYB0 1578 aa11.92□□□□□ -0.5
SHQ1-203ENST00000463369 ECM2O94769 699 aaPredicted RBP11.92□□□□□ -0.5
SHQ1-203ENST00000463369 RAB3GAP2Q9H2M9 1393 aa11.92□□□□□ -0.5
SHQ1-203ENST00000463369 HECW2Q9P2P5 1572 aa11.92□□□□□ -0.5
SHQ1-203ENST00000463369 KDM6BO15054 1643 aa11.92□□□□□ -0.5
SHQ1-203ENST00000463369 UBE2Q2Q8WVN8 375 aa11.91□□□□□ -0.5
SHQ1-203ENST00000463369 SPAG9O60271 1321 aaKnown RBP11.91□□□□□ -0.5
SHQ1-203ENST00000463369 SLC4A2P04920 1241 aa11.91□□□□□ -0.5
SHQ1-203ENST00000463369 MLH3Q9UHC1 1453 aa11.9□□□□□ -0.5
SHQ1-203ENST00000463369 PUS7Q96PZ0 661 aaKnown RBP11.9□□□□□ -0.5
SHQ1-203ENST00000463369 ZMYM4Q5VZL5 1548 aa11.89□□□□□ -0.51
SHQ1-203ENST00000463369 ANP32CO43423 234 aa11.89□□□□□ -0.51
SHQ1-203ENST00000463369 NEUROD2Q15784 382 aa11.89□□□□□ -0.51
SHQ1-203ENST00000463369 KIF15Q9NS87 1388 aa11.89□□□□□ -0.51
SHQ1-203ENST00000463369 RGL2O15211 777 aa11.88□□□□□ -0.51
SHQ1-203ENST00000463369 RAPGEF3O95398 923 aa11.88□□□□□ -0.51
SHQ1-203ENST00000463369 DUOX2Q9NRD8 1548 aa11.88□□□□□ -0.51
SHQ1-203ENST00000463369 ABCA6Q8N139 1617 aa11.87□□□□□ -0.51
SHQ1-203ENST00000463369 COL17A1Q9UMD9 1497 aaPredicted RBP11.87□□□□□ -0.51
SHQ1-203ENST00000463369 ANKRD50Q9ULJ7 1429 aa11.87□□□□□ -0.51
SHQ1-203ENST00000463369 EIF2AK4Q9P2K8 1649 aaKnown RBP11.85□□□□□ -0.51
SHQ1-203ENST00000463369 MAGI2Q86UL8 1455 aa11.85□□□□□ -0.51
SHQ1-203ENST00000463369 DIP2CQ9Y2E4 1556 aa11.85□□□□□ -0.51
SHQ1-203ENST00000463369 BRD2P25440 801 aaKnown RBP11.85□□□□□ -0.51
SHQ1-203ENST00000463369 SALL2Q9Y467 1007 aaPredicted RBP11.85□□□□□ -0.51
SHQ1-203ENST00000463369 BCORL1Q5H9F3 1711 aa11.84□□□□□ -0.51
SHQ1-203ENST00000463369 ERBINQ96RT1 1412 aa11.84□□□□□ -0.51
SHQ1-203ENST00000463369 NOP58Q9Y2X3 529 aaKnown RBP11.84□□□□□ -0.51
SHQ1-203ENST00000463369 PPP4R2Q9NY27 417 aa11.83□□□□□ -0.51
SHQ1-203ENST00000463369 IRX6P78412 446 aaPredicted RBP11.83□□□□□ -0.52
SHQ1-203ENST00000463369 UNC13BO14795 1591 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms