RNA–Protein interactions for RNA: ENST00000463366.1

SRGAP2B-201, Transcript of SLIT-ROBO Rho GTPase activating protein 2B, humanhuman

TSL 4

Gene SRGAP2B, Length 537 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2B-201ENST00000463366 KIF15Q9NS87 1388 aa23.82■■□□□ 1.4
SRGAP2B-201ENST00000463366 RNF17Q9BXT8 1623 aaKnown RBP23.81■■□□□ 1.4
SRGAP2B-201ENST00000463366 ANKRD30AQ9BXX3 1397 aa23.81■■□□□ 1.4
SRGAP2B-201ENST00000463366 NCOA1Q15788 1441 aa23.8■■□□□ 1.4
SRGAP2B-201ENST00000463366 RRP7BPQ9NSQ0 103 aa23.8■■□□□ 1.4
SRGAP2B-201ENST00000463366 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.79■■□□□ 1.4
SRGAP2B-201ENST00000463366 PPARGC1BQ86YN6 1023 aaKnown RBP23.79■■□□□ 1.4
SRGAP2B-201ENST00000463366 WASHC2CQ9Y4E1 1318 aa23.79■■□□□ 1.4
SRGAP2B-201ENST00000463366 ERBINQ96RT1 1412 aa23.78■■□□□ 1.4
SRGAP2B-201ENST00000463366 CHIC2Q9UKJ5 165 aa23.78■■□□□ 1.4
SRGAP2B-201ENST00000463366 ADGRL2O95490 1459 aa23.78■■□□□ 1.4
SRGAP2B-201ENST00000463366 KDM5DQ9BY66 1539 aa23.78■■□□□ 1.4
SRGAP2B-201ENST00000463366 UHRF1BP1Q6BDS2 1440 aa23.77■■□□□ 1.4
SRGAP2B-201ENST00000463366 PTPRKQ15262 1439 aa23.76■■□□□ 1.39
SRGAP2B-201ENST00000463366 HSPA2P54652 639 aa23.75■■□□□ 1.39
SRGAP2B-201ENST00000463366 MROH1Q8NDA8 1641 aa23.73■■□□□ 1.39
SRGAP2B-201ENST00000463366 ZC3H13Q5T200 1668 aaKnown RBP23.73■■□□□ 1.39
SRGAP2B-201ENST00000463366 PZPP20742 1482 aa23.7■■□□□ 1.38
SRGAP2B-201ENST00000463366 DEPDC5O75140 1603 aa23.69■■□□□ 1.38
SRGAP2B-201ENST00000463366 ABCC3O15438 1527 aa23.69■■□□□ 1.38
SRGAP2B-201ENST00000463366 PRDM15P57071 1507 aaPredicted RBP23.68■■□□□ 1.38
SRGAP2B-201ENST00000463366 ROCK1Q13464 1354 aa23.67■■□□□ 1.38
SRGAP2B-201ENST00000463366 RRBP1Q9P2E9 1410 aaKnown RBP23.67■■□□□ 1.38
SRGAP2B-201ENST00000463366 FBXO31Q5XUX0 539 aaPredicted RBP23.65■■□□□ 1.38
SRGAP2B-201ENST00000463366 ANKRD50Q9ULJ7 1429 aa23.63■■□□□ 1.37
SRGAP2B-201ENST00000463366 ZNF142P52746 1687 aaPredicted RBP23.63■■□□□ 1.37
SRGAP2B-201ENST00000463366 MYO3AQ8NEV4 1616 aa23.62■■□□□ 1.37
SRGAP2B-201ENST00000463366 CEP152O94986 1710 aa23.62■■□□□ 1.37
SRGAP2B-201ENST00000463366 KANK1Q14678 1352 aa23.62■■□□□ 1.37
SRGAP2B-201ENST00000463366 ARHGAP31Q2M1Z3 1444 aa23.61■■□□□ 1.37
SRGAP2B-201ENST00000463366 STRCQ7RTU9 1775 aa23.61■■□□□ 1.37
SRGAP2B-201ENST00000463366 TNRQ92752 1358 aa23.61■■□□□ 1.37
SRGAP2B-201ENST00000463366 CAMSAP1Q5T5Y3 1602 aa23.6■■□□□ 1.37
SRGAP2B-201ENST00000463366 DMRT2Q9Y5R5 561 aa23.6■■□□□ 1.37
SRGAP2B-201ENST00000463366 VWDEQ8N2E2 1590 aa23.6■■□□□ 1.37
SRGAP2B-201ENST00000463366 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.59■■□□□ 1.37
SRGAP2B-201ENST00000463366 CEP170BQ9Y4F5 1589 aaPredicted RBP23.59■■□□□ 1.37
SRGAP2B-201ENST00000463366 A2ML1A8K2U0 1454 aa23.58■■□□□ 1.37
SRGAP2B-201ENST00000463366 LMTK2Q8IWU2 1503 aa23.58■■□□□ 1.36
SRGAP2B-201ENST00000463366 ITGAEP38570 1179 aa23.57■■□□□ 1.36
SRGAP2B-201ENST00000463366 SPATA31D1Q6ZQQ2 1576 aa23.57■■□□□ 1.36
SRGAP2B-201ENST00000463366 CFAP65Q6ZU64 1925 aaKnown RBP23.56■■□□□ 1.36
SRGAP2B-201ENST00000463366 NLRP1Q9C000 1473 aa23.55■■□□□ 1.36
SRGAP2B-201ENST00000463366 ERVK-7P63135 1459 aa23.54■■□□□ 1.36
SRGAP2B-201ENST00000463366 PLA2R1Q13018 1463 aa23.53■■□□□ 1.36
SRGAP2B-201ENST00000463366 PTPRTO14522 1441 aa23.5■■□□□ 1.35
SRGAP2B-201ENST00000463366 UNC13BO14795 1591 aa23.49■■□□□ 1.35
SRGAP2B-201ENST00000463366 PKD2Q13563 968 aa23.48■■□□□ 1.35
SRGAP2B-201ENST00000463366 THEMISQ8N1K5 641 aaPredicted RBP23.48■■□□□ 1.35
SRGAP2B-201ENST00000463366 EFCAB6Q5THR3 1501 aa23.46■■□□□ 1.35
SRGAP2B-201ENST00000463366 UGGT1Q9NYU2 1555 aa23.45■■□□□ 1.34
SRGAP2B-201ENST00000463366 TET3O43151 1660 aa23.44■■□□□ 1.34
SRGAP2B-201ENST00000463366 RPRD2Q5VT52 1461 aaKnown RBP23.43■■□□□ 1.34
SRGAP2B-201ENST00000463366 NCKAP5LQ9HCH0 1330 aa23.43■■□□□ 1.34
SRGAP2B-201ENST00000463366 NAIPQ13075 1403 aa23.42■■□□□ 1.34
SRGAP2B-201ENST00000463366 GCC2Q8IWJ2 1684 aa23.41■■□□□ 1.34
SRGAP2B-201ENST00000463366 NOS1P29475 1434 aa23.41■■□□□ 1.34
SRGAP2B-201ENST00000463366 IQGAP3Q86VI3 1631 aa23.41■■□□□ 1.34
SRGAP2B-201ENST00000463366 NUP155O75694 1391 aa23.39■■□□□ 1.33
SRGAP2B-201ENST00000463366 ANKLE2Q86XL3 938 aa23.38■■□□□ 1.33
SRGAP2B-201ENST00000463366 HFM1A2PYH4 1435 aa23.38■■□□□ 1.33
SRGAP2B-201ENST00000463366 UBR1Q8IWV7 1749 aa23.38■■□□□ 1.33
SRGAP2B-201ENST00000463366 POLR1AO95602 1720 aaPredicted RBP23.37■■□□□ 1.33
SRGAP2B-201ENST00000463366 SLC52A1Q9NWF4 448 aa23.37■■□□□ 1.33
SRGAP2B-201ENST00000463366 KDM5AP29375 1690 aaKnown RBP23.36■■□□□ 1.33
SRGAP2B-201ENST00000463366 SYNMO15061 1565 aa23.35■■□□□ 1.33
SRGAP2B-201ENST00000463366 IDI1Q13907 227 aa23.35■■□□□ 1.33
SRGAP2B-201ENST00000463366 E9PCH4 1651 aa23.33■■□□□ 1.33
SRGAP2B-201ENST00000463366 PIK3C2BO00750 1634 aa23.33■■□□□ 1.32
SRGAP2B-201ENST00000463366 MED14O60244 1454 aa23.32■■□□□ 1.32
SRGAP2B-201ENST00000463366 NEURL4Q96JN8 1562 aa23.31■■□□□ 1.32
SRGAP2B-201ENST00000463366 SLIT1O75093 1534 aa23.3■■□□□ 1.32
SRGAP2B-201ENST00000463366 CERKQ8TCT0 537 aa23.3■■□□□ 1.32
SRGAP2B-201ENST00000463366 ARHGAP23Q9P227 1491 aa23.3■■□□□ 1.32
SRGAP2B-201ENST00000463366 STAG3Q9UJ98 1225 aa23.27■■□□□ 1.32
SRGAP2B-201ENST00000463366 LTBP4Q8N2S1 1624 aa23.26■■□□□ 1.31
SRGAP2B-201ENST00000463366 NPHP4O75161 1426 aaPredicted RBP23.25■■□□□ 1.31
SRGAP2B-201ENST00000463366 ILDR1Q86SU0 546 aaPredicted RBP23.25■■□□□ 1.31
SRGAP2B-201ENST00000463366 FBXO41Q8TF61 875 aa23.25■■□□□ 1.31
SRGAP2B-201ENST00000463366 TMEM2Q9UHN6 1383 aa23.25■■□□□ 1.31
SRGAP2B-201ENST00000463366 LTKP29376 864 aa23.23■■□□□ 1.31
SRGAP2B-201ENST00000463366 TXNDC2Q86VQ3 553 aa23.23■■□□□ 1.31
SRGAP2B-201ENST00000463366 EID1Q9Y6B2 187 aa23.23■■□□□ 1.31
SRGAP2B-201ENST00000463366 SCAF11Q99590 1463 aaKnown RBP23.23■■□□□ 1.31
SRGAP2B-201ENST00000463366 ADGRB3O60242 1522 aa23.23■■□□□ 1.31
SRGAP2B-201ENST00000463366 IQGAP1P46940 1657 aa23.22■■□□□ 1.31
SRGAP2B-201ENST00000463366 ACIN1Q9UKV3 1341 aaKnown RBP23.21■■□□□ 1.31
SRGAP2B-201ENST00000463366 ZNF335Q9H4Z2 1342 aaPredicted RBP23.2■■□□□ 1.3
SRGAP2B-201ENST00000463366 TRIM52Q96A61 297 aa23.19■■□□□ 1.3
SRGAP2B-201ENST00000463366 TMEM131LA2VDJ0 1609 aa23.19■■□□□ 1.3
SRGAP2B-201ENST00000463366 SPHKAPQ2M3C7 1700 aa23.18■■□□□ 1.3
SRGAP2B-201ENST00000463366 IQSEC2Q5JU85 1478 aa23.17■■□□□ 1.3
SRGAP2B-201ENST00000463366 MYO5BQ9ULV0 1848 aa23.17■■□□□ 1.3
SRGAP2B-201ENST00000463366 HDGFP51858 240 aaKnown RBP23.15■■□□□ 1.3
SRGAP2B-201ENST00000463366 SLC4A1APQ9BWU0 796 aaKnown RBP23.14■■□□□ 1.29
SRGAP2B-201ENST00000463366 SETD5Q9C0A6 1442 aa23.13■■□□□ 1.29
SRGAP2B-201ENST00000463366 ZFYVE9O95405 1425 aa23.12■■□□□ 1.29
SRGAP2B-201ENST00000463366 CPS1P31327 1500 aa23.11■■□□□ 1.29
SRGAP2B-201ENST00000463366 TRPM2O94759 1503 aa23.09■■□□□ 1.29
SRGAP2B-201ENST00000463366 CHGAP10645 457 aaKnown RBP23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms