RNA–Protein interactions for RNA: ENST00000463084.1

COL4A2-204, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 679 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-204ENST00000463084 RSPH4AQ5TD94 716 aa20.69■□□□□ 0.9
COL4A2-204ENST00000463084 TNRQ92752 1358 aa20.69■□□□□ 0.9
COL4A2-204ENST00000463084 FBXO31Q5XUX0 539 aaPredicted RBP20.68■□□□□ 0.9
COL4A2-204ENST00000463084 SCAF1Q9H7N4 1312 aaKnown RBP20.68■□□□□ 0.9
COL4A2-204ENST00000463084 A2ML1A8K2U0 1454 aa20.68■□□□□ 0.9
COL4A2-204ENST00000463084 KDM5DQ9BY66 1539 aa20.66■□□□□ 0.9
COL4A2-204ENST00000463084 TCOF1Q13428 1488 aaKnown RBP20.65■□□□□ 0.9
COL4A2-204ENST00000463084 SPATA31D1Q6ZQQ2 1576 aa20.64■□□□□ 0.9
COL4A2-204ENST00000463084 ILDR2Q71H61 639 aa20.64■□□□□ 0.89
COL4A2-204ENST00000463084 LOC105371045A0A1W2PR82 267 aa20.62■□□□□ 0.89
COL4A2-204ENST00000463084 PZPP20742 1482 aa20.62■□□□□ 0.89
COL4A2-204ENST00000463084 DNMT1P26358 1616 aaKnown RBP20.61■□□□□ 0.89
COL4A2-204ENST00000463084 VPS8Q8N3P4 1428 aa20.61■□□□□ 0.89
COL4A2-204ENST00000463084 ANKLE2Q86XL3 938 aa20.6■□□□□ 0.89
COL4A2-204ENST00000463084 LRRC9Q6ZRR7 1453 aa20.59■□□□□ 0.89
COL4A2-204ENST00000463084 PIP4K2BP78356 416 aa20.59■□□□□ 0.89
COL4A2-204ENST00000463084 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.59■□□□□ 0.89
COL4A2-204ENST00000463084 THEMISQ8N1K5 641 aaPredicted RBP20.58■□□□□ 0.89
COL4A2-204ENST00000463084 ARHGEF5Q12774 1597 aa20.58■□□□□ 0.88
COL4A2-204ENST00000463084 FAM135AQ9P2D6 1515 aa20.57■□□□□ 0.88
COL4A2-204ENST00000463084 MIA2Q96PC5 1412 aa20.56■□□□□ 0.88
COL4A2-204ENST00000463084 SOCS7O14512 581 aa20.55■□□□□ 0.88
COL4A2-204ENST00000463084 APLP2Q06481 763 aa20.55■□□□□ 0.88
COL4A2-204ENST00000463084 KANK4Q5T7N3 995 aaPredicted RBP20.53■□□□□ 0.88
COL4A2-204ENST00000463084 NLRP1Q9C000 1473 aa20.53■□□□□ 0.88
COL4A2-204ENST00000463084 UGGT1Q9NYU2 1555 aa20.53■□□□□ 0.88
COL4A2-204ENST00000463084 TOM1O60784 492 aa20.52■□□□□ 0.88
COL4A2-204ENST00000463084 POLR1AO95602 1720 aaPredicted RBP20.52■□□□□ 0.88
COL4A2-204ENST00000463084 SHANK2Q9UPX8 1470 aa20.5■□□□□ 0.87
COL4A2-204ENST00000463084 NPHP4O75161 1426 aaPredicted RBP20.5■□□□□ 0.87
COL4A2-204ENST00000463084 MYOM3Q5VTT5 1437 aa20.5■□□□□ 0.87
COL4A2-204ENST00000463084 CPS1P31327 1500 aa20.49■□□□□ 0.87
COL4A2-204ENST00000463084 NEURL4Q96JN8 1562 aa20.49■□□□□ 0.87
COL4A2-204ENST00000463084 ABCC3O15438 1527 aa20.48■□□□□ 0.87
COL4A2-204ENST00000463084 SENP3Q9H4L4 574 aaPredicted RBP20.48■□□□□ 0.87
COL4A2-204ENST00000463084 HSPA1LP34931 641 aa20.46■□□□□ 0.87
COL4A2-204ENST00000463084 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.46■□□□□ 0.87
COL4A2-204ENST00000463084 MAST1Q9Y2H9 1570 aa20.46■□□□□ 0.87
COL4A2-204ENST00000463084 RNF17Q9BXT8 1623 aaKnown RBP20.45■□□□□ 0.86
COL4A2-204ENST00000463084 RRP7BPQ9NSQ0 103 aa20.44■□□□□ 0.86
COL4A2-204ENST00000463084 ZC3H13Q5T200 1668 aaKnown RBP20.44■□□□□ 0.86
COL4A2-204ENST00000463084 ERVK-7P63135 1459 aa20.43■□□□□ 0.86
COL4A2-204ENST00000463084 KIF15Q9NS87 1388 aa20.43■□□□□ 0.86
COL4A2-204ENST00000463084 EIF2AK4Q9P2K8 1649 aaKnown RBP20.42■□□□□ 0.86
COL4A2-204ENST00000463084 MAP3K1Q13233 1512 aa20.42■□□□□ 0.86
COL4A2-204ENST00000463084 DUOX2Q9NRD8 1548 aa20.42■□□□□ 0.86
COL4A2-204ENST00000463084 STAG3Q9UJ98 1225 aa20.41■□□□□ 0.86
COL4A2-204ENST00000463084 DEPDC5O75140 1603 aa20.39■□□□□ 0.86
COL4A2-204ENST00000463084 VWDEQ8N2E2 1590 aa20.39■□□□□ 0.85
COL4A2-204ENST00000463084 CEP152O94986 1710 aa20.39■□□□□ 0.85
COL4A2-204ENST00000463084 IQGAP1P46940 1657 aa20.38■□□□□ 0.85
COL4A2-204ENST00000463084 MED14O60244 1454 aa20.38■□□□□ 0.85
COL4A2-204ENST00000463084 KANK1Q14678 1352 aa20.38■□□□□ 0.85
COL4A2-204ENST00000463084 PHF23Q9BUL5 403 aaPredicted RBP20.37■□□□□ 0.85
COL4A2-204ENST00000463084 CHIC2Q9UKJ5 165 aa20.37■□□□□ 0.85
COL4A2-204ENST00000463084 MROH1Q8NDA8 1641 aa20.36■□□□□ 0.85
COL4A2-204ENST00000463084 TXNDC2Q86VQ3 553 aa20.36■□□□□ 0.85
COL4A2-204ENST00000463084 EID1Q9Y6B2 187 aa20.36■□□□□ 0.85
COL4A2-204ENST00000463084 ABCC5O15440 1437 aa20.35■□□□□ 0.85
COL4A2-204ENST00000463084 ERBINQ96RT1 1412 aa20.35■□□□□ 0.85
COL4A2-204ENST00000463084 PTPN23Q9H3S7 1636 aa20.35■□□□□ 0.85
COL4A2-204ENST00000463084 SCAF11Q99590 1463 aaKnown RBP20.34■□□□□ 0.85
COL4A2-204ENST00000463084 DAPK1P53355 1430 aa20.33■□□□□ 0.84
COL4A2-204ENST00000463084 CFAP65Q6ZU64 1925 aaKnown RBP20.32■□□□□ 0.84
COL4A2-204ENST00000463084 MED1Q15648 1581 aaPredicted RBP20.31■□□□□ 0.84
COL4A2-204ENST00000463084 ANKRD30AQ9BXX3 1397 aa20.31■□□□□ 0.84
COL4A2-204ENST00000463084 FGD6Q6ZV73 1430 aa20.3■□□□□ 0.84
COL4A2-204ENST00000463084 LTKP29376 864 aa20.3■□□□□ 0.84
COL4A2-204ENST00000463084 PRDM15P57071 1507 aaPredicted RBP20.3■□□□□ 0.84
COL4A2-204ENST00000463084 LRRC7Q96NW7 1537 aa20.3■□□□□ 0.84
COL4A2-204ENST00000463084 CROCC2H7BZ55 1655 aa20.29■□□□□ 0.84
COL4A2-204ENST00000463084 FAM50AQ14320 339 aaKnown RBP20.29■□□□□ 0.84
COL4A2-204ENST00000463084 UBR1Q8IWV7 1749 aa20.29■□□□□ 0.84
COL4A2-204ENST00000463084 BCANQ96GW7 911 aa20.28■□□□□ 0.84
COL4A2-204ENST00000463084 ARHGAP31Q2M1Z3 1444 aa20.27■□□□□ 0.84
COL4A2-204ENST00000463084 SYNMO15061 1565 aa20.27■□□□□ 0.84
COL4A2-204ENST00000463084 TMEM2Q9UHN6 1383 aa20.23■□□□□ 0.83
COL4A2-204ENST00000463084 STRCP1A6NGW2 1772 aa20.23■□□□□ 0.83
COL4A2-204ENST00000463084 ARHGAP23Q9P227 1491 aa20.23■□□□□ 0.83
COL4A2-204ENST00000463084 SLIT1O75093 1534 aa20.22■□□□□ 0.83
COL4A2-204ENST00000463084 PIK3C2BO00750 1634 aa20.22■□□□□ 0.83
COL4A2-204ENST00000463084 IDI1Q13907 227 aa20.21■□□□□ 0.83
COL4A2-204ENST00000463084 ALKQ9UM73 1620 aa20.2■□□□□ 0.82
COL4A2-204ENST00000463084 EFCAB6Q5THR3 1501 aa20.2■□□□□ 0.82
COL4A2-204ENST00000463084 SLC26A8Q96RN1 970 aa20.19■□□□□ 0.82
COL4A2-204ENST00000463084 PPP1R15AO75807 674 aaPredicted RBP20.17■□□□□ 0.82
COL4A2-204ENST00000463084 PROSER2Q86WR7 435 aaPredicted RBP20.17■□□□□ 0.82
COL4A2-204ENST00000463084 RBM33Q96EV2 1170 aaKnown RBP20.15■□□□□ 0.82
COL4A2-204ENST00000463084 TMEM94Q12767 1356 aa20.15■□□□□ 0.82
COL4A2-204ENST00000463084 LMTK2Q8IWU2 1503 aa20.15■□□□□ 0.82
COL4A2-204ENST00000463084 CHGAP10645 457 aaKnown RBP20.14■□□□□ 0.81
COL4A2-204ENST00000463084 KCNA6P17658 529 aa20.13■□□□□ 0.81
COL4A2-204ENST00000463084 ANKRD50Q9ULJ7 1429 aa20.12■□□□□ 0.81
COL4A2-204ENST00000463084 SLC52A1Q9NWF4 448 aa20.12■□□□□ 0.81
COL4A2-204ENST00000463084 ADGRB3O60242 1522 aa20.12■□□□□ 0.81
COL4A2-204ENST00000463084 ADGRL2O95490 1459 aa20.1■□□□□ 0.81
COL4A2-204ENST00000463084 NOS1P29475 1434 aa20.1■□□□□ 0.81
COL4A2-204ENST00000463084 HDGFP51858 240 aaKnown RBP20.08■□□□□ 0.81
COL4A2-204ENST00000463084 C14orf37Q86TY3 774 aa20.07■□□□□ 0.8
COL4A2-204ENST00000463084 MSH6P52701 1360 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms