RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.58■■■□□ 2.492e-7■□□□□ 8
NUP43-205ENST00000463048 CLTCQ00610 1675 aaKnown RBP30.53■■■□□ 2.48
NUP43-205ENST00000463048 AEBP2Q6ZN18 517 aaPredicted RBP30.53■■■□□ 2.48
NUP43-205ENST00000463048 RNF17Q9BXT8 1623 aaKnown RBP30.52■■■□□ 2.48
NUP43-205ENST00000463048 PTPRMP28827 1452 aa30.51■■■□□ 2.48
NUP43-205ENST00000463048 CEBPAP49715 358 aaPredicted RBP30.5■■■□□ 2.47
NUP43-205ENST00000463048 WASHC2CQ9Y4E1 1318 aa30.48■■■□□ 2.47
NUP43-205ENST00000463048 NAIPQ13075 1403 aa30.48■■■□□ 2.47
NUP43-205ENST00000463048 MROH1Q8NDA8 1641 aa30.48■■■□□ 2.47
NUP43-205ENST00000463048 GCC2Q8IWJ2 1684 aa30.47■■■□□ 2.47
NUP43-205ENST00000463048 HFM1A2PYH4 1435 aa30.44■■■□□ 2.46
NUP43-205ENST00000463048 DEPDC5O75140 1603 aa30.44■■■□□ 2.46
NUP43-205ENST00000463048 KDM5DQ9BY66 1539 aa30.43■■■□□ 2.46
NUP43-205ENST00000463048 CEP152O94986 1710 aa30.43■■■□□ 2.46
NUP43-205ENST00000463048 CNTLNQ9NXG0 1405 aa30.43■■■□□ 2.46
NUP43-205ENST00000463048 PPP6R1Q9UPN7 881 aa30.42■■■□□ 2.46
NUP43-205ENST00000463048 PRDM15P57071 1507 aaPredicted RBP30.42■■■□□ 2.46
NUP43-205ENST00000463048 KANK1Q14678 1352 aa30.41■■■□□ 2.46
NUP43-205ENST00000463048 C3P01024 1663 aa30.4■■■□□ 2.46
NUP43-205ENST00000463048 ABCC3O15438 1527 aa30.4■■■□□ 2.46
NUP43-205ENST00000463048 ZMYM3Q14202 1370 aa30.4■■■□□ 2.46
NUP43-205ENST00000463048 MROH2AA6NES4 1674 aa30.37■■■□□ 2.45
NUP43-205ENST00000463048 UNC13BO14795 1591 aa30.36■■■□□ 2.45
NUP43-205ENST00000463048 ZC3H13Q5T200 1668 aaKnown RBP30.35■■■□□ 2.45
NUP43-205ENST00000463048 TRIM52Q96A61 297 aa30.33■■■□□ 2.45
NUP43-205ENST00000463048 NUP155O75694 1391 aa30.32■■■□□ 2.44
NUP43-205ENST00000463048 CAMSAP1Q5T5Y3 1602 aa30.32■■■□□ 2.44
NUP43-205ENST00000463048 FAM135AQ9P2D6 1515 aa30.32■■■□□ 2.44
NUP43-205ENST00000463048 TRIM26Q12899 539 aaPredicted RBP30.31■■■□□ 2.44
NUP43-205ENST00000463048 SETD5Q9C0A6 1442 aa30.3■■■□□ 2.44
NUP43-205ENST00000463048 VWDEQ8N2E2 1590 aa30.29■■■□□ 2.44
NUP43-205ENST00000463048 FBXO31Q5XUX0 539 aaPredicted RBP30.29■■■□□ 2.44
NUP43-205ENST00000463048 CFAP65Q6ZU64 1925 aaKnown RBP30.26■■■□□ 2.43
NUP43-205ENST00000463048 IQGAP3Q86VI3 1631 aa30.24■■■□□ 2.43
NUP43-205ENST00000463048 RAB3GAP2Q9H2M9 1393 aa30.24■■■□□ 2.43
NUP43-205ENST00000463048 PZPP20742 1482 aa30.23■■■□□ 2.43
NUP43-205ENST00000463048 LMTK2Q8IWU2 1503 aa30.22■■■□□ 2.43
NUP43-205ENST00000463048 TET3O43151 1660 aa30.2■■■□□ 2.42
NUP43-205ENST00000463048 EFCAB6Q5THR3 1501 aa30.19■■■□□ 2.42
NUP43-205ENST00000463048 NPATQ14207 1427 aa30.19■■■□□ 2.42
NUP43-205ENST00000463048 TNRQ92752 1358 aa30.15■■■□□ 2.42
NUP43-205ENST00000463048 PREX1Q8TCU6 1659 aa30.14■■■□□ 2.42
NUP43-205ENST00000463048 ERVK-7P63135 1459 aa30.14■■■□□ 2.42
NUP43-205ENST00000463048 ARHGAP31Q2M1Z3 1444 aa30.13■■■□□ 2.41
NUP43-205ENST00000463048 E9PCH4 1651 aa30.13■■■□□ 2.41
NUP43-205ENST00000463048 SLC4A1APQ9BWU0 796 aaKnown RBP30.12■■■□□ 2.41
NUP43-205ENST00000463048 UHRF1BP1Q6BDS2 1440 aa30.1■■■□□ 2.41
NUP43-205ENST00000463048 SPATA31D1Q6ZQQ2 1576 aa30.09■■■□□ 2.41
NUP43-205ENST00000463048 MYO3AQ8NEV4 1616 aa30.09■■■□□ 2.41
NUP43-205ENST00000463048 SETD1BQ9UPS6 1966 aaKnown RBP30.07■■■□□ 2.4
NUP43-205ENST00000463048 PKD2Q13563 968 aa30.07■■■□□ 2.4
NUP43-205ENST00000463048 LMTK3Q96Q04 1460 aa30.06■■■□□ 2.4
NUP43-205ENST00000463048 HSPA2P54652 639 aa30.06■■■□□ 2.4
NUP43-205ENST00000463048 FOXD1Q16676 465 aa30.05■■■□□ 2.4
NUP43-205ENST00000463048 MPHOSPH9Q99550 1183 aa30.04■■■□□ 2.4
NUP43-205ENST00000463048 PCGF6Q9BYE7 350 aa30.04■■■□□ 2.4
NUP43-205ENST00000463048 RPRD2Q5VT52 1461 aaKnown RBP30.04■■■□□ 2.4
NUP43-205ENST00000463048 SYNMO15061 1565 aa30.02■■■□□ 2.4
NUP43-205ENST00000463048 CEP170BQ9Y4F5 1589 aaPredicted RBP30■■■□□ 2.39
NUP43-205ENST00000463048 NOS1P29475 1434 aa29.99■■■□□ 2.39
NUP43-205ENST00000463048 UGGT1Q9NYU2 1555 aa29.97■■■□□ 2.39
NUP43-205ENST00000463048 A2ML1A8K2U0 1454 aa29.96■■■□□ 2.39
NUP43-205ENST00000463048 HRCP23327 699 aa29.96■■■□□ 2.39
NUP43-205ENST00000463048 ACIN1Q9UKV3 1341 aaKnown RBP29.96■■■□□ 2.39
NUP43-205ENST00000463048 ZNF142P52746 1687 aaPredicted RBP29.95■■■□□ 2.39
NUP43-205ENST00000463048 NLRP1Q9C000 1473 aa29.95■■■□□ 2.39
NUP43-205ENST00000463048 SPHKAPQ2M3C7 1700 aa29.95■■■□□ 2.38
NUP43-205ENST00000463048 IDI1Q13907 227 aa29.94■■■□□ 2.38
NUP43-205ENST00000463048 PIK3C2BO00750 1634 aa29.93■■■□□ 2.38
NUP43-205ENST00000463048 STAG3Q9UJ98 1225 aa29.92■■■□□ 2.38
NUP43-205ENST00000463048 CHGAP10645 457 aaKnown RBP29.91■■■□□ 2.38
NUP43-205ENST00000463048 SLC52A1Q9NWF4 448 aa29.88■■■□□ 2.37
NUP43-205ENST00000463048 PTPRTO14522 1441 aa29.88■■■□□ 2.37
NUP43-205ENST00000463048 PLA2R1Q13018 1463 aa29.86■■■□□ 2.37
NUP43-205ENST00000463048 UBR1Q8IWV7 1749 aa29.85■■■□□ 2.37
NUP43-205ENST00000463048 TRPM2O94759 1503 aa29.84■■■□□ 2.37
NUP43-205ENST00000463048 CLTCL1P53675 1640 aa29.83■■■□□ 2.37
NUP43-205ENST00000463048 THEMISQ8N1K5 641 aaPredicted RBP29.83■■■□□ 2.37
NUP43-205ENST00000463048 ADGRB3O60242 1522 aa29.81■■■□□ 2.36
NUP43-205ENST00000463048 MYO5BQ9ULV0 1848 aa29.8■■■□□ 2.36
NUP43-205ENST00000463048 NCKAP5LQ9HCH0 1330 aa29.79■■■□□ 2.36
NUP43-205ENST00000463048 TMEM131LA2VDJ0 1609 aa29.75■■■□□ 2.35
NUP43-205ENST00000463048 STRCQ7RTU9 1775 aa29.74■■■□□ 2.35
NUP43-205ENST00000463048 CCDC144AA2RUR9 1427 aa29.73■■■□□ 2.35
NUP43-205ENST00000463048 SENP3Q9H4L4 574 aaPredicted RBP29.73■■■□□ 2.35
NUP43-205ENST00000463048 ZNF326Q5BKZ1 582 aaKnown RBP29.72■■■□□ 2.35
NUP43-205ENST00000463048 KIF1BO60333 1816 aa29.71■■■□□ 2.35
NUP43-205ENST00000463048 KDM5AP29375 1690 aaKnown RBP29.71■■■□□ 2.35
NUP43-205ENST00000463048 ANKLE2Q86XL3 938 aa29.7■■■□□ 2.35
NUP43-205ENST00000463048 ANKRD30BQ9BXX2 1392 aa29.69■■■□□ 2.34
NUP43-205ENST00000463048 TMEM2Q9UHN6 1383 aa29.69■■■□□ 2.34
NUP43-205ENST00000463048 NUTM2DQ5VT03 806 aaPredicted RBP29.69■■■□□ 2.34
NUP43-205ENST00000463048 TXNDC2Q86VQ3 553 aa29.68■■■□□ 2.34
NUP43-205ENST00000463048 DHX57Q6P158 1386 aaKnown RBP29.67■■■□□ 2.34
NUP43-205ENST00000463048 POLR1AO95602 1720 aaPredicted RBP29.67■■■□□ 2.34
NUP43-205ENST00000463048 LTKP29376 864 aa29.66■■■□□ 2.34
NUP43-205ENST00000463048 EID1Q9Y6B2 187 aa29.66■■■□□ 2.34
NUP43-205ENST00000463048 ARHGAP23Q9P227 1491 aa29.65■■■□□ 2.34
NUP43-205ENST00000463048 SLIT1O75093 1534 aa29.65■■■□□ 2.34
NUP43-205ENST00000463048 RIMS2Q9UQ26 1411 aa29.64■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms