RNA–Protein interactions for RNA: ENST00000462723.1

RPA3-205, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-205ENST00000462723 ATMINO43313 823 aaPredicted RBP12.22□□□□□ -0.45
RPA3-205ENST00000462723 DAPK1P53355 1430 aa12.21□□□□□ -0.45
RPA3-205ENST00000462723 FAM163AQ96GL9 167 aaPredicted RBP12.21□□□□□ -0.45
RPA3-205ENST00000462723 PLEKHH2Q8IVE3 1493 aa12.21□□□□□ -0.46
RPA3-205ENST00000462723 EFCAB2Q5VUJ9 269 aa12.2□□□□□ -0.46
RPA3-205ENST00000462723 SAMD9LQ8IVG5 1584 aa12.2□□□□□ -0.46
RPA3-205ENST00000462723 PTPRKQ15262 1439 aa12.2□□□□□ -0.46
RPA3-205ENST00000462723 MS4A3Q96HJ5 214 aa12.19□□□□□ -0.46
RPA3-205ENST00000462723 CROCC2H7BZ55 1655 aa12.19□□□□□ -0.46
RPA3-205ENST00000462723 ABCC5O15440 1437 aa12.19□□□□□ -0.46
RPA3-205ENST00000462723 SETD5Q9C0A6 1442 aa12.19□□□□□ -0.46
RPA3-205ENST00000462723 ARHGEF5Q12774 1597 aa12.18□□□□□ -0.46
RPA3-205ENST00000462723 ADGBQ8N7X0 1667 aa12.17□□□□□ -0.46
RPA3-205ENST00000462723 RSPH4AQ5TD94 716 aa12.17□□□□□ -0.46
RPA3-205ENST00000462723 CCER1Q8TC90 406 aaPredicted RBP12.17□□□□□ -0.46
RPA3-205ENST00000462723 HFM1A2PYH4 1435 aa12.17□□□□□ -0.46
RPA3-205ENST00000462723 AKNAQ7Z591 1439 aa12.17□□□□□ -0.46
RPA3-205ENST00000462723 KIAA1107Q9UPP5 1409 aa12.17□□□□□ -0.46
RPA3-205ENST00000462723 ROCK1Q13464 1354 aa12.17□□□□□ -0.46
RPA3-205ENST00000462723 SHANK2Q9UPX8 1470 aa12.16□□□□□ -0.46
RPA3-205ENST00000462723 MNX1P50219 401 aaPredicted RBP12.16□□□□□ -0.46
RPA3-205ENST00000462723 RAB3GAP2Q9H2M9 1393 aa12.16□□□□□ -0.46
RPA3-205ENST00000462723 SYCP2Q9BX26 1530 aa12.16□□□□□ -0.46
RPA3-205ENST00000462723 FANCAO15360 1455 aa12.15□□□□□ -0.46
RPA3-205ENST00000462723 CCDC141Q6ZP82 1450 aa12.15□□□□□ -0.46
RPA3-205ENST00000462723 GLI2P10070 1586 aa12.15□□□□□ -0.46
RPA3-205ENST00000462723 CD109Q6YHK3 1445 aa12.15□□□□□ -0.46
RPA3-205ENST00000462723 CHIC2Q9UKJ5 165 aa12.15□□□□□ -0.46
RPA3-205ENST00000462723 GCC2Q8IWJ2 1684 aa12.15□□□□□ -0.46
RPA3-205ENST00000462723 MBD5Q9P267 1494 aa12.14□□□□□ -0.47
RPA3-205ENST00000462723 CFAP74Q9C0B2 1584 aa12.14□□□□□ -0.47
RPA3-205ENST00000462723 NAIPQ13075 1403 aa12.14□□□□□ -0.47
RPA3-205ENST00000462723 TSPY4P0CV99 314 aa12.14□□□□□ -0.47
RPA3-205ENST00000462723 TSPY10P0CW01 314 aa12.14□□□□□ -0.47
RPA3-205ENST00000462723 HRCP23327 699 aa12.14□□□□□ -0.47
RPA3-205ENST00000462723 HNRNPMP52272 730 aaKnown RBP eCLIP12.14□□□□□ -0.47
RPA3-205ENST00000462723 SCUBE2Q9NQ36 999 aa12.14□□□□□ -0.47
RPA3-205ENST00000462723 ABCC1P33527 1531 aa12.14□□□□□ -0.47
RPA3-205ENST00000462723 C9orf84Q5VXU9 1444 aa12.12□□□□□ -0.47
RPA3-205ENST00000462723 MAP3K4Q9Y6R4 1608 aa12.12□□□□□ -0.47
RPA3-205ENST00000462723 RRP7BPQ9NSQ0 103 aa12.12□□□□□ -0.47
RPA3-205ENST00000462723 ANKRD30AQ9BXX3 1397 aa12.12□□□□□ -0.47
RPA3-205ENST00000462723 ADGRL2O95490 1459 aa12.12□□□□□ -0.47
RPA3-205ENST00000462723 DIP2BQ9P265 1576 aa12.12□□□□□ -0.47
RPA3-205ENST00000462723 ACIN1Q9UKV3 1341 aaKnown RBP12.11□□□□□ -0.47
RPA3-205ENST00000462723 MAST1Q9Y2H9 1570 aa12.1□□□□□ -0.47
RPA3-205ENST00000462723 ADGRL1O94910 1474 aa12.1□□□□□ -0.47
RPA3-205ENST00000462723 ZEB1P37275 1124 aaPredicted RBP12.1□□□□□ -0.47
RPA3-205ENST00000462723 ARHGEF12Q9NZN5 1544 aa12.1□□□□□ -0.47
RPA3-205ENST00000462723 NCOA1Q15788 1441 aa12.1□□□□□ -0.47
RPA3-205ENST00000462723 FAM69CQ0P6D2 419 aa12.09□□□□□ -0.47
RPA3-205ENST00000462723 DNAJC5Q9H3Z4 198 aa12.09□□□□□ -0.47
RPA3-205ENST00000462723 NEO1Q92859 1461 aa12.08□□□□□ -0.47
RPA3-205ENST00000462723 DHX57Q6P158 1386 aaKnown RBP12.07□□□□□ -0.48
RPA3-205ENST00000462723 SCAPERQ9BY12 1400 aa12.07□□□□□ -0.48
RPA3-205ENST00000462723 PLXNC1O60486 1568 aa12.06□□□□□ -0.48
RPA3-205ENST00000462723 TRAPPC8Q9Y2L5 1435 aa12.06□□□□□ -0.48
RPA3-205ENST00000462723 ATN1P54259 1190 aaPredicted RBP12.06□□□□□ -0.48
RPA3-205ENST00000462723 KIF13AQ9H1H9 1805 aa12.05□□□□□ -0.48
RPA3-205ENST00000462723 SPAG9O60271 1321 aaKnown RBP12.05□□□□□ -0.48
RPA3-205ENST00000462723 CLSPNQ9HAW4 1339 aa12.05□□□□□ -0.48
RPA3-205ENST00000462723 KIF15Q9NS87 1388 aa12.05□□□□□ -0.48
RPA3-205ENST00000462723 KDM6BO15054 1643 aa12.04□□□□□ -0.48
RPA3-205ENST00000462723 TEX14Q8IWB6 1497 aa12.04□□□□□ -0.48
RPA3-205ENST00000462723 TSPOAP1O95153 1857 aa12.04□□□□□ -0.48
RPA3-205ENST00000462723 RTEL1-TNFRSF6BF6WH68 1400 aa12.03□□□□□ -0.48
RPA3-205ENST00000462723 ANKRD50Q9ULJ7 1429 aa12.03□□□□□ -0.48
RPA3-205ENST00000462723 ZNF518AQ6AHZ1 1483 aa12.03□□□□□ -0.48
RPA3-205ENST00000462723 AFAP1Q8N556 730 aa12.03□□□□□ -0.48
RPA3-205ENST00000462723 ZFYVE16Q7Z3T8 1539 aa12.02□□□□□ -0.48
RPA3-205ENST00000462723 INO80Q9ULG1 1556 aaPredicted RBP12.02□□□□□ -0.49
RPA3-205ENST00000462723 SPDYE4A6NLX3 237 aa12.02□□□□□ -0.49
RPA3-205ENST00000462723 POGZQ7Z3K3 1410 aa12.02□□□□□ -0.49
RPA3-205ENST00000462723 ATP7AQ04656 1500 aa12.01□□□□□ -0.49
RPA3-205ENST00000462723 TRIM52Q96A61 297 aa12.01□□□□□ -0.49
RPA3-205ENST00000462723 DENND4BO75064 1496 aaPredicted RBP12.01□□□□□ -0.49
RPA3-205ENST00000462723 DUOX2Q9NRD8 1548 aa12.01□□□□□ -0.49
RPA3-205ENST00000462723 PPRC1Q5VV67 1664 aaKnown RBP12□□□□□ -0.49
RPA3-205ENST00000462723 POTEFA5A3E0 1075 aa12□□□□□ -0.49
RPA3-205ENST00000462723 MYT1LQ9UL68 1186 aa12□□□□□ -0.49
RPA3-205ENST00000462723 KDM5CP41229 1560 aa12□□□□□ -0.49
RPA3-205ENST00000462723 ERBINQ96RT1 1412 aa11.98□□□□□ -0.49
RPA3-205ENST00000462723 CDAN1Q8IWY9 1227 aa11.98□□□□□ -0.49
RPA3-205ENST00000462723 RICTORQ6R327 1708 aa11.97□□□□□ -0.49
RPA3-205ENST00000462723 HECW2Q9P2P5 1572 aa11.97□□□□□ -0.49
RPA3-205ENST00000462723 MLH3Q9UHC1 1453 aa11.97□□□□□ -0.49
RPA3-205ENST00000462723 FKBP8Q14318 412 aa11.97□□□□□ -0.49
RPA3-205ENST00000462723 TSPYL2Q9H2G4 693 aaPredicted RBP11.97□□□□□ -0.49
RPA3-205ENST00000462723 KIDINS220Q9ULH0 1771 aa11.97□□□□□ -0.49
RPA3-205ENST00000462723 MPHOSPH9Q99550 1183 aa11.95□□□□□ -0.5
RPA3-205ENST00000462723 UNC13BO14795 1591 aa11.94□□□□□ -0.5
RPA3-205ENST00000462723 RAPGEF3O95398 923 aa11.94□□□□□ -0.5
RPA3-205ENST00000462723 BMP2KQ9NSY1 1161 aaPredicted RBP11.94□□□□□ -0.5
RPA3-205ENST00000462723 CCDC61Q9Y6R9 512 aa11.94□□□□□ -0.5
RPA3-205ENST00000462723 KDM5DQ9BY66 1539 aa11.94□□□□□ -0.5
RPA3-205ENST00000462723 NUP155O75694 1391 aa11.93□□□□□ -0.5
RPA3-205ENST00000462723 PZPP20742 1482 aa11.93□□□□□ -0.5
RPA3-205ENST00000462723 EIF2AK4Q9P2K8 1649 aaKnown RBP11.93□□□□□ -0.5
RPA3-205ENST00000462723 DHX29Q7Z478 1369 aaKnown RBP11.92□□□□□ -0.5
RPA3-205ENST00000462723 FRMPD1Q5SYB0 1578 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms