RNA–Protein interactions for RNA: ENST00000462625.1

LIMK2-206, Transcript of LIM domain kinase 2, humanhuman

TSL 2

Gene LIMK2, Length 1,042 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-206ENST00000462625 KIF15Q9NS87 1388 aa35.61■■■■□ 3.29
LIMK2-206ENST00000462625 RRP7BPQ9NSQ0 103 aa35.6■■■■□ 3.29
LIMK2-206ENST00000462625 ANKRD30AQ9BXX3 1397 aa35.6■■■■□ 3.29
LIMK2-206ENST00000462625 CHIC2Q9UKJ5 165 aa35.58■■■■□ 3.29
LIMK2-206ENST00000462625 UHRF1BP1Q6BDS2 1440 aa35.57■■■■□ 3.29
LIMK2-206ENST00000462625 RNF17Q9BXT8 1623 aaKnown RBP35.57■■■■□ 3.28
LIMK2-206ENST00000462625 NPATQ14207 1427 aa35.57■■■■□ 3.28
LIMK2-206ENST00000462625 WASHC2CQ9Y4E1 1318 aa35.57■■■■□ 3.28
LIMK2-206ENST00000462625 KDM5DQ9BY66 1539 aa35.56■■■■□ 3.28
LIMK2-206ENST00000462625 ERBINQ96RT1 1412 aa35.53■■■■□ 3.28
LIMK2-206ENST00000462625 HSPA2P54652 639 aa35.51■■■■□ 3.28
LIMK2-206ENST00000462625 NCOA1Q15788 1441 aa35.49■■■■□ 3.27
LIMK2-206ENST00000462625 ADGRL2O95490 1459 aa35.48■■■■□ 3.27
LIMK2-206ENST00000462625 ZC3H13Q5T200 1668 aaKnown RBP35.48■■■■□ 3.27
LIMK2-206ENST00000462625 PTPRKQ15262 1439 aa35.45■■■■□ 3.27
LIMK2-206ENST00000462625 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.44■■■■□ 3.26
LIMK2-206ENST00000462625 MROH1Q8NDA8 1641 aa35.4■■■■□ 3.26
LIMK2-206ENST00000462625 PZPP20742 1482 aa35.4■■■■□ 3.26
LIMK2-206ENST00000462625 ABCC3O15438 1527 aa35.39■■■■□ 3.26
LIMK2-206ENST00000462625 CEP152O94986 1710 aa35.37■■■■□ 3.25
LIMK2-206ENST00000462625 DEPDC5O75140 1603 aa35.36■■■■□ 3.25
LIMK2-206ENST00000462625 MYO3AQ8NEV4 1616 aa35.36■■■■□ 3.25
LIMK2-206ENST00000462625 PRDM15P57071 1507 aaPredicted RBP35.36■■■■□ 3.25
LIMK2-206ENST00000462625 KANK1Q14678 1352 aa35.36■■■■□ 3.25
LIMK2-206ENST00000462625 ITGAEP38570 1179 aa35.34■■■■□ 3.25
LIMK2-206ENST00000462625 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.34■■■■□ 3.251e-7■□□□□ 9.7
LIMK2-206ENST00000462625 ROCK1Q13464 1354 aa35.32■■■■□ 3.24
LIMK2-206ENST00000462625 CAMSAP1Q5T5Y3 1602 aa35.32■■■■□ 3.24
LIMK2-206ENST00000462625 RRBP1Q9P2E9 1410 aaKnown RBP35.32■■■■□ 3.24
LIMK2-206ENST00000462625 ZNF142P52746 1687 aaPredicted RBP35.31■■■■□ 3.24
LIMK2-206ENST00000462625 ANKRD50Q9ULJ7 1429 aa35.31■■■■□ 3.24
LIMK2-206ENST00000462625 FBXO31Q5XUX0 539 aaPredicted RBP35.3■■■■□ 3.24
LIMK2-206ENST00000462625 TNRQ92752 1358 aa35.29■■■■□ 3.24
LIMK2-206ENST00000462625 CFAP65Q6ZU64 1925 aaKnown RBP35.29■■■■□ 3.24
LIMK2-206ENST00000462625 CEP170BQ9Y4F5 1589 aaPredicted RBP35.27■■■■□ 3.24
LIMK2-206ENST00000462625 DMRT2Q9Y5R5 561 aa35.25■■■■□ 3.23
LIMK2-206ENST00000462625 STRCQ7RTU9 1775 aa35.25■■■■□ 3.23
LIMK2-206ENST00000462625 A2ML1A8K2U0 1454 aa35.22■■■■□ 3.23
LIMK2-206ENST00000462625 ARHGAP31Q2M1Z3 1444 aa35.19■■■■□ 3.22
LIMK2-206ENST00000462625 SPATA31D1Q6ZQQ2 1576 aa35.18■■■■□ 3.22
LIMK2-206ENST00000462625 VWDEQ8N2E2 1590 aa35.17■■■■□ 3.22
LIMK2-206ENST00000462625 NLRP1Q9C000 1473 aa35.17■■■■□ 3.22
LIMK2-206ENST00000462625 LMTK2Q8IWU2 1503 aa35.16■■■■□ 3.22
LIMK2-206ENST00000462625 ERVK-7P63135 1459 aa35.16■■■■□ 3.22
LIMK2-206ENST00000462625 PLA2R1Q13018 1463 aa35.11■■■■□ 3.21
LIMK2-206ENST00000462625 UNC13BO14795 1591 aa35.1■■■■□ 3.21
LIMK2-206ENST00000462625 PTPRTO14522 1441 aa35.07■■■■□ 3.21
LIMK2-206ENST00000462625 PKD2Q13563 968 aa35.07■■■■□ 3.2
LIMK2-206ENST00000462625 THEMISQ8N1K5 641 aaPredicted RBP35.07■■■■□ 3.2
LIMK2-206ENST00000462625 UGGT1Q9NYU2 1555 aa35.07■■■■□ 3.2
LIMK2-206ENST00000462625 EFCAB6Q5THR3 1501 aa35.06■■■■□ 3.2
LIMK2-206ENST00000462625 TET3O43151 1660 aa35.04■■■■□ 3.2
LIMK2-206ENST00000462625 NCKAP5LQ9HCH0 1330 aa35.03■■■■□ 3.2
LIMK2-206ENST00000462625 GCC2Q8IWJ2 1684 aa35.02■■■■□ 3.2
LIMK2-206ENST00000462625 RPRD2Q5VT52 1461 aaKnown RBP34.99■■■■□ 3.19
LIMK2-206ENST00000462625 POLR1AO95602 1720 aaPredicted RBP34.98■■■■□ 3.19
LIMK2-206ENST00000462625 IQGAP3Q86VI3 1631 aa34.98■■■■□ 3.19
LIMK2-206ENST00000462625 NUP155O75694 1391 aa34.96■■■■□ 3.19
LIMK2-206ENST00000462625 ANKLE2Q86XL3 938 aa34.94■■■■□ 3.18
LIMK2-206ENST00000462625 UBR1Q8IWV7 1749 aa34.94■■■■□ 3.18
LIMK2-206ENST00000462625 NAIPQ13075 1403 aa34.93■■■■□ 3.18
LIMK2-206ENST00000462625 NOS1P29475 1434 aa34.9■■■■□ 3.18
LIMK2-206ENST00000462625 STAG3Q9UJ98 1225 aa34.9■■■■□ 3.18
LIMK2-206ENST00000462625 HFM1A2PYH4 1435 aa34.89■■■■□ 3.18
LIMK2-206ENST00000462625 PIK3C2BO00750 1634 aa34.88■■■■□ 3.17
LIMK2-206ENST00000462625 SYNMO15061 1565 aa34.88■■■■□ 3.17
LIMK2-206ENST00000462625 E9PCH4 1651 aa34.87■■■■□ 3.17
LIMK2-206ENST00000462625 SLC52A1Q9NWF4 448 aa34.86■■■■□ 3.17
LIMK2-206ENST00000462625 KDM5AP29375 1690 aaKnown RBP34.86■■■■□ 3.17
LIMK2-206ENST00000462625 IDI1Q13907 227 aa34.84■■■■□ 3.17
LIMK2-206ENST00000462625 NEURL4Q96JN8 1562 aa34.82■■■■□ 3.16
LIMK2-206ENST00000462625 CERKQ8TCT0 537 aa34.81■■■■□ 3.16
LIMK2-206ENST00000462625 MED14O60244 1454 aa34.77■■■■□ 3.16
LIMK2-206ENST00000462625 SLIT1O75093 1534 aa34.76■■■■□ 3.16
LIMK2-206ENST00000462625 NPHP4O75161 1426 aaPredicted RBP34.76■■■■□ 3.16
LIMK2-206ENST00000462625 EID1Q9Y6B2 187 aa34.76■■■■□ 3.16
LIMK2-206ENST00000462625 TRIM52Q96A61 297 aa34.75■■■■□ 3.15
LIMK2-206ENST00000462625 IQGAP1P46940 1657 aa34.75■■■■□ 3.15
LIMK2-206ENST00000462625 ILDR1Q86SU0 546 aaPredicted RBP34.74■■■■□ 3.15
LIMK2-206ENST00000462625 ADGRB3O60242 1522 aa34.74■■■■□ 3.15
LIMK2-206ENST00000462625 ARHGAP23Q9P227 1491 aa34.73■■■■□ 3.15
LIMK2-206ENST00000462625 FBXO41Q8TF61 875 aa34.73■■■■□ 3.15
LIMK2-206ENST00000462625 SCAF11Q99590 1463 aaKnown RBP34.72■■■■□ 3.15
LIMK2-206ENST00000462625 TXNDC2Q86VQ3 553 aa34.72■■■■□ 3.15
LIMK2-206ENST00000462625 TMEM2Q9UHN6 1383 aa34.71■■■■□ 3.15
LIMK2-206ENST00000462625 LTBP4Q8N2S1 1624 aa34.7■■■■□ 3.15
LIMK2-206ENST00000462625 ZNF335Q9H4Z2 1342 aaPredicted RBP34.69■■■■□ 3.14
LIMK2-206ENST00000462625 SPHKAPQ2M3C7 1700 aa34.69■■■■□ 3.14
LIMK2-206ENST00000462625 MYO5BQ9ULV0 1848 aa34.67■■■■□ 3.14
LIMK2-206ENST00000462625 LTKP29376 864 aa34.65■■■■□ 3.14
LIMK2-206ENST00000462625 CHGAP10645 457 aaKnown RBP34.63■■■■□ 3.13
LIMK2-206ENST00000462625 TMEM131LA2VDJ0 1609 aa34.63■■■■□ 3.13
LIMK2-206ENST00000462625 ACIN1Q9UKV3 1341 aaKnown RBP34.62■■■■□ 3.13
LIMK2-206ENST00000462625 HDGFP51858 240 aaKnown RBP34.61■■■■□ 3.13
LIMK2-206ENST00000462625 SLC4A1APQ9BWU0 796 aaKnown RBP34.61■■■■□ 3.13
LIMK2-206ENST00000462625 IQSEC2Q5JU85 1478 aa34.58■■■■□ 3.13
LIMK2-206ENST00000462625 SETD5Q9C0A6 1442 aa34.55■■■■□ 3.12
LIMK2-206ENST00000462625 CPS1P31327 1500 aa34.54■■■■□ 3.12
LIMK2-206ENST00000462625 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.51■■■■□ 3.12
LIMK2-206ENST00000462625 RIMS2Q9UQ26 1411 aa34.51■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms