RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 GCC2Q8IWJ2 1684 aa17.76■□□□□ 0.43
CPNE1-221ENST00000462352 PPP6R1Q9UPN7 881 aa17.75■□□□□ 0.43
CPNE1-221ENST00000462352 FER1L4A9Z1Z3 1794 aa17.75■□□□□ 0.43
CPNE1-221ENST00000462352 MROH1Q8NDA8 1641 aa17.75■□□□□ 0.43
CPNE1-221ENST00000462352 DEPDC5O75140 1603 aa17.73■□□□□ 0.43
CPNE1-221ENST00000462352 ESF1Q9H501 851 aaKnown RBP17.73■□□□□ 0.43
CPNE1-221ENST00000462352 RIMS1Q86UR5 1692 aaKnown RBP17.73■□□□□ 0.43
CPNE1-221ENST00000462352 PRDM15P57071 1507 aaPredicted RBP17.72■□□□□ 0.43
CPNE1-221ENST00000462352 TRIM26Q12899 539 aaPredicted RBP17.71■□□□□ 0.43
CPNE1-221ENST00000462352 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.71■□□□□ 0.43
CPNE1-221ENST00000462352 KDM5DQ9BY66 1539 aa17.71■□□□□ 0.43
CPNE1-221ENST00000462352 FAM135AQ9P2D6 1515 aa17.71■□□□□ 0.43
CPNE1-221ENST00000462352 CNTLNQ9NXG0 1405 aa17.71■□□□□ 0.43
CPNE1-221ENST00000462352 WASHC2CQ9Y4E1 1318 aa17.71■□□□□ 0.42
CPNE1-221ENST00000462352 PTPRMP28827 1452 aa17.7■□□□□ 0.42
CPNE1-221ENST00000462352 CLTCQ00610 1675 aaKnown RBP17.7■□□□□ 0.42
CPNE1-221ENST00000462352 KANK1Q14678 1352 aa17.68■□□□□ 0.42
CPNE1-221ENST00000462352 ABCC3O15438 1527 aa17.68■□□□□ 0.42
CPNE1-221ENST00000462352 UNC13BO14795 1591 aa17.68■□□□□ 0.42
CPNE1-221ENST00000462352 VWDEQ8N2E2 1590 aa17.67■□□□□ 0.42
CPNE1-221ENST00000462352 SETD5Q9C0A6 1442 aa17.67■□□□□ 0.42
CPNE1-221ENST00000462352 MROH2AA6NES4 1674 aa17.67■□□□□ 0.42
CPNE1-221ENST00000462352 ZC3H13Q5T200 1668 aaKnown RBP17.67■□□□□ 0.42
CPNE1-221ENST00000462352 ZMYM3Q14202 1370 aa17.66■□□□□ 0.42
CPNE1-221ENST00000462352 CEP152O94986 1710 aa17.65■□□□□ 0.42
CPNE1-221ENST00000462352 CEBPAP49715 358 aaPredicted RBP17.64■□□□□ 0.41
CPNE1-221ENST00000462352 PLPPR3Q6T4P5 718 aa17.64■□□□□ 0.41
CPNE1-221ENST00000462352 NUP155O75694 1391 aa17.64■□□□□ 0.41
CPNE1-221ENST00000462352 LMTK2Q8IWU2 1503 aa17.63■□□□□ 0.41
CPNE1-221ENST00000462352 C3P01024 1663 aa17.63■□□□□ 0.41
CPNE1-221ENST00000462352 RAB3GAP2Q9H2M9 1393 aa17.62■□□□□ 0.41
CPNE1-221ENST00000462352 CAMSAP1Q5T5Y3 1602 aa17.61■□□□□ 0.41
CPNE1-221ENST00000462352 IQGAP3Q86VI3 1631 aa17.61■□□□□ 0.41
CPNE1-221ENST00000462352 TRIM52Q96A61 297 aa17.6■□□□□ 0.41
CPNE1-221ENST00000462352 PZPP20742 1482 aa17.59■□□□□ 0.41
CPNE1-221ENST00000462352 ARHGAP31Q2M1Z3 1444 aa17.58■□□□□ 0.41
CPNE1-221ENST00000462352 TET3O43151 1660 aa17.58■□□□□ 0.4
CPNE1-221ENST00000462352 EFCAB6Q5THR3 1501 aa17.57■□□□□ 0.4
CPNE1-221ENST00000462352 NPATQ14207 1427 aa17.56■□□□□ 0.4
CPNE1-221ENST00000462352 ACIN1Q9UKV3 1341 aaKnown RBP17.56■□□□□ 0.4
CPNE1-221ENST00000462352 FBXO31Q5XUX0 539 aaPredicted RBP17.56■□□□□ 0.4
CPNE1-221ENST00000462352 HRCP23327 699 aa17.55■□□□□ 0.4
CPNE1-221ENST00000462352 ERVK-7P63135 1459 aa17.53■□□□□ 0.4
CPNE1-221ENST00000462352 RPRD2Q5VT52 1461 aaKnown RBP17.52■□□□□ 0.4
CPNE1-221ENST00000462352 SLC4A1APQ9BWU0 796 aaKnown RBP17.52■□□□□ 0.4
CPNE1-221ENST00000462352 SPATA31D1Q6ZQQ2 1576 aa17.52■□□□□ 0.39
CPNE1-221ENST00000462352 E9PCH4 1651 aa17.52■□□□□ 0.39
CPNE1-221ENST00000462352 PREX1Q8TCU6 1659 aa17.51■□□□□ 0.39
CPNE1-221ENST00000462352 TNRQ92752 1358 aa17.51■□□□□ 0.39
CPNE1-221ENST00000462352 PCGF6Q9BYE7 350 aa17.5■□□□□ 0.39
CPNE1-221ENST00000462352 PKD2Q13563 968 aa17.49■□□□□ 0.39
CPNE1-221ENST00000462352 MPHOSPH9Q99550 1183 aa17.49■□□□□ 0.39
CPNE1-221ENST00000462352 CFAP65Q6ZU64 1925 aaKnown RBP17.49■□□□□ 0.39
CPNE1-221ENST00000462352 NOS1P29475 1434 aa17.48■□□□□ 0.39
CPNE1-221ENST00000462352 SETD1BQ9UPS6 1966 aaKnown RBP17.48■□□□□ 0.39
CPNE1-221ENST00000462352 MYO3AQ8NEV4 1616 aa17.47■□□□□ 0.39
CPNE1-221ENST00000462352 UHRF1BP1Q6BDS2 1440 aa17.47■□□□□ 0.39
CPNE1-221ENST00000462352 SYNMO15061 1565 aa17.45■□□□□ 0.38
CPNE1-221ENST00000462352 LMTK3Q96Q04 1460 aa17.44■□□□□ 0.38
CPNE1-221ENST00000462352 NLRP1Q9C000 1473 aa17.44■□□□□ 0.38
CPNE1-221ENST00000462352 FOXD1Q16676 465 aa17.43■□□□□ 0.38
CPNE1-221ENST00000462352 PTPRTO14522 1441 aa17.43■□□□□ 0.38
CPNE1-221ENST00000462352 A2ML1A8K2U0 1454 aa17.42■□□□□ 0.38
CPNE1-221ENST00000462352 SPHKAPQ2M3C7 1700 aa17.41■□□□□ 0.38
CPNE1-221ENST00000462352 CEP170BQ9Y4F5 1589 aaPredicted RBP17.41■□□□□ 0.38
CPNE1-221ENST00000462352 ZNF142P52746 1687 aaPredicted RBP17.41■□□□□ 0.38
CPNE1-221ENST00000462352 PLA2R1Q13018 1463 aa17.4■□□□□ 0.38
CPNE1-221ENST00000462352 IDI1Q13907 227 aa17.4■□□□□ 0.38
CPNE1-221ENST00000462352 SLC52A1Q9NWF4 448 aa17.4■□□□□ 0.38
CPNE1-221ENST00000462352 UGGT1Q9NYU2 1555 aa17.4■□□□□ 0.38
CPNE1-221ENST00000462352 TRPM2O94759 1503 aa17.39■□□□□ 0.37
CPNE1-221ENST00000462352 PIK3C2BO00750 1634 aa17.38■□□□□ 0.37
CPNE1-221ENST00000462352 HSPA2P54652 639 aa17.37■□□□□ 0.37
CPNE1-221ENST00000462352 CLTCL1P53675 1640 aa17.34■□□□□ 0.37
CPNE1-221ENST00000462352 UBR1Q8IWV7 1749 aa17.34■□□□□ 0.37
CPNE1-221ENST00000462352 STAG3Q9UJ98 1225 aa17.34■□□□□ 0.37
CPNE1-221ENST00000462352 ADGRB3O60242 1522 aa17.33■□□□□ 0.37
CPNE1-221ENST00000462352 DHX57Q6P158 1386 aaKnown RBP17.33■□□□□ 0.36
CPNE1-221ENST00000462352 THEMISQ8N1K5 641 aaPredicted RBP17.33■□□□□ 0.36
CPNE1-221ENST00000462352 ANKRD30BQ9BXX2 1392 aa17.32■□□□□ 0.36
CPNE1-221ENST00000462352 KDM5AP29375 1690 aaKnown RBP17.32■□□□□ 0.36
CPNE1-221ENST00000462352 CCDC144AA2RUR9 1427 aa17.31■□□□□ 0.36
CPNE1-221ENST00000462352 CHGAP10645 457 aaKnown RBP17.31■□□□□ 0.36
CPNE1-221ENST00000462352 TMEM131LA2VDJ0 1609 aa17.3■□□□□ 0.36
CPNE1-221ENST00000462352 TMEM2Q9UHN6 1383 aa17.27■□□□□ 0.35
CPNE1-221ENST00000462352 SLIT1O75093 1534 aa17.26■□□□□ 0.35
CPNE1-221ENST00000462352 KIF1BO60333 1816 aa17.26■□□□□ 0.35
CPNE1-221ENST00000462352 MYO5BQ9ULV0 1848 aa17.26■□□□□ 0.35
CPNE1-221ENST00000462352 ARHGAP23Q9P227 1491 aa17.26■□□□□ 0.35
CPNE1-221ENST00000462352 NCKAP5LQ9HCH0 1330 aa17.23■□□□□ 0.35
CPNE1-221ENST00000462352 STRCQ7RTU9 1775 aa17.23■□□□□ 0.35
CPNE1-221ENST00000462352 ZNF326Q5BKZ1 582 aaKnown RBP17.23■□□□□ 0.35
CPNE1-221ENST00000462352 ANKLE2Q86XL3 938 aa17.23■□□□□ 0.35
CPNE1-221ENST00000462352 ZFYVE9O95405 1425 aa17.22■□□□□ 0.35
CPNE1-221ENST00000462352 SPATA31E1Q6ZUB1 1445 aa17.22■□□□□ 0.35
CPNE1-221ENST00000462352 RIMS2Q9UQ26 1411 aa17.22■□□□□ 0.35
CPNE1-221ENST00000462352 LTKP29376 864 aa17.22■□□□□ 0.35
CPNE1-221ENST00000462352 NEURL4Q96JN8 1562 aa17.21■□□□□ 0.35
CPNE1-221ENST00000462352 SCAF11Q99590 1463 aaKnown RBP17.21■□□□□ 0.35
CPNE1-221ENST00000462352 TXNDC2Q86VQ3 553 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms