RNA–Protein interactions for RNA: ENST00000462207.1

PBRM1-219, Transcript of polybromo 1, humanhuman

TSL 2

Gene PBRM1, Length 1,921 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-219ENST00000462207 TRIM52Q96A61 297 aa20.03■□□□□ 0.8
PBRM1-219ENST00000462207 RNF17Q9BXT8 1623 aaKnown RBP20.02■□□□□ 0.8
PBRM1-219ENST00000462207 AGLP35573 1532 aa20.01■□□□□ 0.79
PBRM1-219ENST00000462207 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20■□□□□ 0.795e-8■■■■□ 22.9
PBRM1-219ENST00000462207 PZPP20742 1482 aa20■□□□□ 0.79
PBRM1-219ENST00000462207 PRDM15P57071 1507 aaPredicted RBP20■□□□□ 0.79
PBRM1-219ENST00000462207 KDM5DQ9BY66 1539 aa20■□□□□ 0.79
PBRM1-219ENST00000462207 NUP155O75694 1391 aa19.99■□□□□ 0.79
PBRM1-219ENST00000462207 DHX57Q6P158 1386 aaKnown RBP19.99■□□□□ 0.79
PBRM1-219ENST00000462207 IQGAP3Q86VI3 1631 aa19.97■□□□□ 0.79
PBRM1-219ENST00000462207 FAM135AQ9P2D6 1515 aa19.96■□□□□ 0.79
PBRM1-219ENST00000462207 GGT6Q6P531 493 aa19.96■□□□□ 0.79
PBRM1-219ENST00000462207 VWDEQ8N2E2 1590 aa19.96■□□□□ 0.79
PBRM1-219ENST00000462207 ARID4BQ4LE39 1312 aaPredicted RBP19.94■□□□□ 0.78
PBRM1-219ENST00000462207 MLECQ14165 292 aa19.93■□□□□ 0.78
PBRM1-219ENST00000462207 CEP152O94986 1710 aa19.92■□□□□ 0.78
PBRM1-219ENST00000462207 MPHOSPH9Q99550 1183 aa19.92■□□□□ 0.78
PBRM1-219ENST00000462207 SLC4A1APQ9BWU0 796 aaKnown RBP19.91■□□□□ 0.78
PBRM1-219ENST00000462207 KANK1Q14678 1352 aa19.91■□□□□ 0.78
PBRM1-219ENST00000462207 ABCC3O15438 1527 aa19.9■□□□□ 0.78
PBRM1-219ENST00000462207 ACIN1Q9UKV3 1341 aaKnown RBP19.89■□□□□ 0.77
PBRM1-219ENST00000462207 CCER1Q8TC90 406 aaPredicted RBP19.89■□□□□ 0.77
PBRM1-219ENST00000462207 FOXD1Q16676 465 aa19.88■□□□□ 0.77
PBRM1-219ENST00000462207 TET3O43151 1660 aa19.87■□□□□ 0.77
PBRM1-219ENST00000462207 LMTK2Q8IWU2 1503 aa19.86■□□□□ 0.77
PBRM1-219ENST00000462207 ZC3H13Q5T200 1668 aaKnown RBP19.86■□□□□ 0.77
PBRM1-219ENST00000462207 PKD2Q13563 968 aa19.86■□□□□ 0.77
PBRM1-219ENST00000462207 EFCAB6Q5THR3 1501 aa19.85■□□□□ 0.77
PBRM1-219ENST00000462207 WASHC2CQ9Y4E1 1318 aa19.85■□□□□ 0.77
PBRM1-219ENST00000462207 CAMSAP1Q5T5Y3 1602 aa19.85■□□□□ 0.77
PBRM1-219ENST00000462207 E9PCH4 1651 aa19.84■□□□□ 0.77
PBRM1-219ENST00000462207 CLTCQ00610 1675 aaKnown RBP19.84■□□□□ 0.77
PBRM1-219ENST00000462207 NPATQ14207 1427 aa19.79■□□□□ 0.76
PBRM1-219ENST00000462207 FER1L4A9Z1Z3 1794 aa19.79■□□□□ 0.76
PBRM1-219ENST00000462207 PPP6R1Q9UPN7 881 aa19.77■□□□□ 0.76
PBRM1-219ENST00000462207 MADDQ8WXG6 1647 aa19.77■□□□□ 0.76
PBRM1-219ENST00000462207 ANKRD30BQ9BXX2 1392 aa19.76■□□□□ 0.75
PBRM1-219ENST00000462207 ADAMTSL3P82987 1691 aa19.75■□□□□ 0.75
PBRM1-219ENST00000462207 PLA2R1Q13018 1463 aa19.75■□□□□ 0.75
PBRM1-219ENST00000462207 ESF1Q9H501 851 aaKnown RBP19.74■□□□□ 0.75
PBRM1-219ENST00000462207 SPHKAPQ2M3C7 1700 aa19.74■□□□□ 0.75
PBRM1-219ENST00000462207 ARHGAP31Q2M1Z3 1444 aa19.73■□□□□ 0.75
PBRM1-219ENST00000462207 RPRD2Q5VT52 1461 aaKnown RBP19.73■□□□□ 0.75
PBRM1-219ENST00000462207 CNTLNQ9NXG0 1405 aa19.73■□□□□ 0.75
PBRM1-219ENST00000462207 MROH2AA6NES4 1674 aa19.73■□□□□ 0.75
PBRM1-219ENST00000462207 RIMS1Q86UR5 1692 aaKnown RBP19.73■□□□□ 0.75
PBRM1-219ENST00000462207 SIN3AQ96ST3 1273 aa19.72■□□□□ 0.75
PBRM1-219ENST00000462207 CLSPNQ9HAW4 1339 aa19.71■□□□□ 0.75
PBRM1-219ENST00000462207 ZMYM3Q14202 1370 aa19.71■□□□□ 0.75
PBRM1-219ENST00000462207 PREX1Q8TCU6 1659 aa19.71■□□□□ 0.75
PBRM1-219ENST00000462207 PTPRTO14522 1441 aa19.7■□□□□ 0.74
PBRM1-219ENST00000462207 TRPM2O94759 1503 aa19.7■□□□□ 0.74
PBRM1-219ENST00000462207 CFAP65Q6ZU64 1925 aaKnown RBP19.7■□□□□ 0.74
PBRM1-219ENST00000462207 UGGT1Q9NYU2 1555 aa19.7■□□□□ 0.74
PBRM1-219ENST00000462207 FBXO31Q5XUX0 539 aaPredicted RBP19.69■□□□□ 0.74
PBRM1-219ENST00000462207 ERVK-7P63135 1459 aa19.69■□□□□ 0.74
PBRM1-219ENST00000462207 SYNMO15061 1565 aa19.69■□□□□ 0.74
PBRM1-219ENST00000462207 C3P01024 1663 aa19.69■□□□□ 0.74
PBRM1-219ENST00000462207 NEUROD1Q13562 356 aa19.68■□□□□ 0.74
PBRM1-219ENST00000462207 CLTCL1P53675 1640 aa19.68■□□□□ 0.74
PBRM1-219ENST00000462207 NOS1P29475 1434 aa19.67■□□□□ 0.74
PBRM1-219ENST00000462207 CEBPAP49715 358 aaPredicted RBP19.66■□□□□ 0.74
PBRM1-219ENST00000462207 PLPPR3Q6T4P5 718 aa19.66■□□□□ 0.74
PBRM1-219ENST00000462207 CCDC144AA2RUR9 1427 aa19.65■□□□□ 0.74
PBRM1-219ENST00000462207 SPATA31D1Q6ZQQ2 1576 aa19.65■□□□□ 0.74
PBRM1-219ENST00000462207 PIK3C2BO00750 1634 aa19.61■□□□□ 0.73
PBRM1-219ENST00000462207 PTPRMP28827 1452 aa19.59■□□□□ 0.73
PBRM1-219ENST00000462207 TNRQ92752 1358 aa19.57■□□□□ 0.72
PBRM1-219ENST00000462207 KDM4FA0A1W2PPD8 638 aa19.57■□□□□ 0.72
PBRM1-219ENST00000462207 IDI1Q13907 227 aa19.55■□□□□ 0.72
PBRM1-219ENST00000462207 TONSLQ96HA7 1378 aa19.54■□□□□ 0.72
PBRM1-219ENST00000462207 SPATA31E1Q6ZUB1 1445 aa19.54■□□□□ 0.72
PBRM1-219ENST00000462207 ADGRB3O60242 1522 aa19.54■□□□□ 0.72
PBRM1-219ENST00000462207 KIF1BO60333 1816 aa19.53■□□□□ 0.72
PBRM1-219ENST00000462207 MYO3AQ8NEV4 1616 aa19.52■□□□□ 0.72
PBRM1-219ENST00000462207 CHGAP10645 457 aaKnown RBP19.51■□□□□ 0.71
PBRM1-219ENST00000462207 RGL3Q3MIN7 710 aa19.51■□□□□ 0.71
PBRM1-219ENST00000462207 SLC52A1Q9NWF4 448 aa19.51■□□□□ 0.71
PBRM1-219ENST00000462207 TMEM131LA2VDJ0 1609 aa19.5■□□□□ 0.71
PBRM1-219ENST00000462207 L3MBTL2Q969R5 705 aa19.5■□□□□ 0.71
PBRM1-219ENST00000462207 MYO5BQ9ULV0 1848 aa19.49■□□□□ 0.71
PBRM1-219ENST00000462207 NEURL4Q96JN8 1562 aa19.48■□□□□ 0.71
PBRM1-219ENST00000462207 NLRP1Q9C000 1473 aa19.48■□□□□ 0.71
PBRM1-219ENST00000462207 ZEB1P37275 1124 aaPredicted RBP19.47■□□□□ 0.71
PBRM1-219ENST00000462207 UBR1Q8IWV7 1749 aa19.45■□□□□ 0.7
PBRM1-219ENST00000462207 A2ML1A8K2U0 1454 aa19.45■□□□□ 0.7
PBRM1-219ENST00000462207 CEP170BQ9Y4F5 1589 aaPredicted RBP19.44■□□□□ 0.7
PBRM1-219ENST00000462207 ZNF326Q5BKZ1 582 aaKnown RBP19.43■□□□□ 0.7
PBRM1-219ENST00000462207 TIMELESSQ9UNS1 1208 aa19.43■□□□□ 0.7
PBRM1-219ENST00000462207 IFT172Q9UG01 1749 aa19.43■□□□□ 0.7
PBRM1-219ENST00000462207 DCAF11Q8TEB1 546 aa19.43■□□□□ 0.7
PBRM1-219ENST00000462207 STAG3Q9UJ98 1225 aa19.43■□□□□ 0.7
PBRM1-219ENST00000462207 ZNF142P52746 1687 aaPredicted RBP19.42■□□□□ 0.7
PBRM1-219ENST00000462207 NEXMIFQ5QGS0 1516 aa19.42■□□□□ 0.7
PBRM1-219ENST00000462207 KDM2AQ9Y2K7 1162 aa19.41■□□□□ 0.7
PBRM1-219ENST00000462207 KDM5AP29375 1690 aaKnown RBP19.41■□□□□ 0.7
PBRM1-219ENST00000462207 PPLO60437 1756 aa19.41■□□□□ 0.7
PBRM1-219ENST00000462207 PPP1R15AO75807 674 aaPredicted RBP19.39■□□□□ 0.69
PBRM1-219ENST00000462207 NUTM2DQ5VT03 806 aaPredicted RBP19.38■□□□□ 0.69
PBRM1-219ENST00000462207 UHRF1BP1Q6BDS2 1440 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms