RNA–Protein interactions for RNA: ENST00000461550.5

MRPL28-207, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 1,478 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-207ENST00000461550 DAPK1P53355 1430 aa27.14■■□□□ 1.94
MRPL28-207ENST00000461550 MYO3AQ8NEV4 1616 aa27.14■■□□□ 1.93
MRPL28-207ENST00000461550 SHANK2Q9UPX8 1470 aa27.12■■□□□ 1.93
MRPL28-207ENST00000461550 RNF17Q9BXT8 1623 aaKnown RBP27.12■■□□□ 1.93
MRPL28-207ENST00000461550 EIF2AK4Q9P2K8 1649 aaKnown RBP27.11■■□□□ 1.93
MRPL28-207ENST00000461550 WASHC2CQ9Y4E1 1318 aa27.1■■□□□ 1.93
MRPL28-207ENST00000461550 DUOX2Q9NRD8 1548 aa27.09■■□□□ 1.93
MRPL28-207ENST00000461550 KIF15Q9NS87 1388 aa27.08■■□□□ 1.93
MRPL28-207ENST00000461550 FAM135AQ9P2D6 1515 aa27.08■■□□□ 1.93
MRPL28-207ENST00000461550 ZNF142P52746 1687 aaPredicted RBP27.08■■□□□ 1.92
MRPL28-207ENST00000461550 RRP7BPQ9NSQ0 103 aa27.07■■□□□ 1.92
MRPL28-207ENST00000461550 MROH1Q8NDA8 1641 aa27.06■■□□□ 1.92
MRPL28-207ENST00000461550 FBXO31Q5XUX0 539 aaPredicted RBP27.06■■□□□ 1.92
MRPL28-207ENST00000461550 CHIC2Q9UKJ5 165 aa27.06■■□□□ 1.92
MRPL28-207ENST00000461550 CEP170BQ9Y4F5 1589 aaPredicted RBP27.05■■□□□ 1.92
MRPL28-207ENST00000461550 CAMSAP1Q5T5Y3 1602 aa27.05■■□□□ 1.92
MRPL28-207ENST00000461550 FAM50AQ14320 339 aaKnown RBP27.05■■□□□ 1.92
MRPL28-207ENST00000461550 PZPP20742 1482 aa27.04■■□□□ 1.92
MRPL28-207ENST00000461550 PPARGC1BQ86YN6 1023 aaKnown RBP27.03■■□□□ 1.92
MRPL28-207ENST00000461550 ABCC3O15438 1527 aa27.03■■□□□ 1.92
MRPL28-207ENST00000461550 NCOA1Q15788 1441 aa27.02■■□□□ 1.92
MRPL28-207ENST00000461550 CEP152O94986 1710 aa27.02■■□□□ 1.92
MRPL28-207ENST00000461550 ZC3H13Q5T200 1668 aaKnown RBP27.01■■□□□ 1.91
MRPL28-207ENST00000461550 TNRQ92752 1358 aa26.99■■□□□ 1.91
MRPL28-207ENST00000461550 ERBINQ96RT1 1412 aa26.98■■□□□ 1.91
MRPL28-207ENST00000461550 DMRT2Q9Y5R5 561 aa26.98■■□□□ 1.91
MRPL28-207ENST00000461550 ANKRD30AQ9BXX3 1397 aa26.97■■□□□ 1.91
MRPL28-207ENST00000461550 A2ML1A8K2U0 1454 aa26.96■■□□□ 1.91
MRPL28-207ENST00000461550 PRDM15P57071 1507 aaPredicted RBP26.94■■□□□ 1.9
MRPL28-207ENST00000461550 CFAP65Q6ZU64 1925 aaKnown RBP26.94■■□□□ 1.9
MRPL28-207ENST00000461550 NCKAP5LQ9HCH0 1330 aa26.93■■□□□ 1.9
MRPL28-207ENST00000461550 PTPRTO14522 1441 aa26.93■■□□□ 1.9
MRPL28-207ENST00000461550 DEPDC5O75140 1603 aa26.92■■□□□ 1.9
MRPL28-207ENST00000461550 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.92■■□□□ 1.98e-6■□□□□ 8.2
MRPL28-207ENST00000461550 ADGRL2O95490 1459 aa26.91■■□□□ 1.9
MRPL28-207ENST00000461550 FBXO41Q8TF61 875 aa26.9■■□□□ 1.9
MRPL28-207ENST00000461550 PLA2R1Q13018 1463 aa26.9■■□□□ 1.9
MRPL28-207ENST00000461550 ERVK-7P63135 1459 aa26.88■■□□□ 1.89
MRPL28-207ENST00000461550 CERKQ8TCT0 537 aa26.87■■□□□ 1.89
MRPL28-207ENST00000461550 SPATA31D1Q6ZQQ2 1576 aa26.87■■□□□ 1.89
MRPL28-207ENST00000461550 NLRP1Q9C000 1473 aa26.85■■□□□ 1.89
MRPL28-207ENST00000461550 PKD2Q13563 968 aa26.82■■□□□ 1.88
MRPL28-207ENST00000461550 UGGT1Q9NYU2 1555 aa26.82■■□□□ 1.88
MRPL28-207ENST00000461550 KANK1Q14678 1352 aa26.82■■□□□ 1.88
MRPL28-207ENST00000461550 POLR1AO95602 1720 aaPredicted RBP26.82■■□□□ 1.88
MRPL28-207ENST00000461550 ANKRD50Q9ULJ7 1429 aa26.8■■□□□ 1.88
MRPL28-207ENST00000461550 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.8■■□□□ 1.88
MRPL28-207ENST00000461550 VWDEQ8N2E2 1590 aa26.79■■□□□ 1.88
MRPL28-207ENST00000461550 ITGAEP38570 1179 aa26.79■■□□□ 1.88
MRPL28-207ENST00000461550 LTBP4Q8N2S1 1624 aa26.78■■□□□ 1.88
MRPL28-207ENST00000461550 ARHGAP31Q2M1Z3 1444 aa26.78■■□□□ 1.88
MRPL28-207ENST00000461550 NEURL4Q96JN8 1562 aa26.77■■□□□ 1.88
MRPL28-207ENST00000461550 LMTK2Q8IWU2 1503 aa26.75■■□□□ 1.87
MRPL28-207ENST00000461550 THEMISQ8N1K5 641 aaPredicted RBP26.74■■□□□ 1.87
MRPL28-207ENST00000461550 ZNF335Q9H4Z2 1342 aaPredicted RBP26.74■■□□□ 1.87
MRPL28-207ENST00000461550 UBR1Q8IWV7 1749 aa26.72■■□□□ 1.87
MRPL28-207ENST00000461550 EFCAB6Q5THR3 1501 aa26.71■■□□□ 1.87
MRPL28-207ENST00000461550 ROCK1Q13464 1354 aa26.71■■□□□ 1.87
MRPL28-207ENST00000461550 ANKLE2Q86XL3 938 aa26.69■■□□□ 1.86
MRPL28-207ENST00000461550 UNC13BO14795 1591 aa26.67■■□□□ 1.86
MRPL28-207ENST00000461550 PIK3C2BO00750 1634 aa26.67■■□□□ 1.86
MRPL28-207ENST00000461550 SYNMO15061 1565 aa26.66■■□□□ 1.86
MRPL28-207ENST00000461550 NPHP4O75161 1426 aaPredicted RBP26.64■■□□□ 1.85
MRPL28-207ENST00000461550 RRBP1Q9P2E9 1410 aaKnown RBP26.64■■□□□ 1.85
MRPL28-207ENST00000461550 TET3O43151 1660 aa26.64■■□□□ 1.85
MRPL28-207ENST00000461550 IQGAP1P46940 1657 aa26.62■■□□□ 1.85
MRPL28-207ENST00000461550 MED14O60244 1454 aa26.62■■□□□ 1.85
MRPL28-207ENST00000461550 NOS1P29475 1434 aa26.61■■□□□ 1.85
MRPL28-207ENST00000461550 GCC2Q8IWJ2 1684 aa26.6■■□□□ 1.85
MRPL28-207ENST00000461550 IDI1Q13907 227 aa26.57■■□□□ 1.84
MRPL28-207ENST00000461550 SLIT1O75093 1534 aa26.57■■□□□ 1.84
MRPL28-207ENST00000461550 IQGAP3Q86VI3 1631 aa26.57■■□□□ 1.84
MRPL28-207ENST00000461550 STAG3Q9UJ98 1225 aa26.56■■□□□ 1.84
MRPL28-207ENST00000461550 RPRD2Q5VT52 1461 aaKnown RBP26.56■■□□□ 1.84
MRPL28-207ENST00000461550 SCAF11Q99590 1463 aaKnown RBP26.56■■□□□ 1.84
MRPL28-207ENST00000461550 ARHGAP23Q9P227 1491 aa26.56■■□□□ 1.84
MRPL28-207ENST00000461550 IQSEC2Q5JU85 1478 aa26.56■■□□□ 1.84
MRPL28-207ENST00000461550 E9PCH4 1651 aa26.55■■□□□ 1.84
MRPL28-207ENST00000461550 LTKP29376 864 aa26.55■■□□□ 1.84
MRPL28-207ENST00000461550 KDM5AP29375 1690 aaKnown RBP26.53■■□□□ 1.84
MRPL28-207ENST00000461550 NUP155O75694 1391 aa26.52■■□□□ 1.84
MRPL28-207ENST00000461550 TXNDC2Q86VQ3 553 aa26.52■■□□□ 1.84
MRPL28-207ENST00000461550 ADGRB3O60242 1522 aa26.52■■□□□ 1.84
MRPL28-207ENST00000461550 TMEM2Q9UHN6 1383 aa26.51■■□□□ 1.83
MRPL28-207ENST00000461550 MYO5BQ9ULV0 1848 aa26.49■■□□□ 1.83
MRPL28-207ENST00000461550 STRCP1A6NGW2 1772 aa26.48■■□□□ 1.83
MRPL28-207ENST00000461550 CPS1P31327 1500 aa26.48■■□□□ 1.83
MRPL28-207ENST00000461550 EID1Q9Y6B2 187 aa26.48■■□□□ 1.83
MRPL28-207ENST00000461550 SLC52A1Q9NWF4 448 aa26.47■■□□□ 1.83
MRPL28-207ENST00000461550 NAIPQ13075 1403 aa26.45■■□□□ 1.82
MRPL28-207ENST00000461550 UBAP1LF5GYI3 381 aa26.43■■□□□ 1.82
MRPL28-207ENST00000461550 TMEM131LA2VDJ0 1609 aa26.41■■□□□ 1.82
MRPL28-207ENST00000461550 SENP3Q9H4L4 574 aaPredicted RBP26.39■■□□□ 1.82
MRPL28-207ENST00000461550 CHGAP10645 457 aaKnown RBP26.38■■□□□ 1.81
MRPL28-207ENST00000461550 HFM1A2PYH4 1435 aa26.36■■□□□ 1.81
MRPL28-207ENST00000461550 SPHKAPQ2M3C7 1700 aa26.36■■□□□ 1.81
MRPL28-207ENST00000461550 ZFYVE9O95405 1425 aa26.34■■□□□ 1.81
MRPL28-207ENST00000461550 LRRC7Q96NW7 1537 aa26.34■■□□□ 1.81
MRPL28-207ENST00000461550 SLC26A8Q96RN1 970 aa26.34■■□□□ 1.81
MRPL28-207ENST00000461550 RIMS2Q9UQ26 1411 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms