RNA–Protein interactions for RNA: ENST00000461469.5

LMBR1-214, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-214ENST00000461469 RNF17Q9BXT8 1623 aaKnown RBP36.83■■■■□ 3.49
LMBR1-214ENST00000461469 KDM5DQ9BY66 1539 aa36.83■■■■□ 3.49
LMBR1-214ENST00000461469 DAPK1P53355 1430 aa36.81■■■■□ 3.48
LMBR1-214ENST00000461469 SHANK2Q9UPX8 1470 aa36.81■■■■□ 3.48
LMBR1-214ENST00000461469 MROH1Q8NDA8 1641 aa36.78■■■■□ 3.48
LMBR1-214ENST00000461469 EIF2AK4Q9P2K8 1649 aaKnown RBP36.78■■■■□ 3.48
LMBR1-214ENST00000461469 ZNF142P52746 1687 aaPredicted RBP36.77■■■■□ 3.48
LMBR1-214ENST00000461469 FAM135AQ9P2D6 1515 aa36.77■■■■□ 3.48
LMBR1-214ENST00000461469 DUOX2Q9NRD8 1548 aa36.75■■■■□ 3.47
LMBR1-214ENST00000461469 FBXO31Q5XUX0 539 aaPredicted RBP36.73■■■■□ 3.47
LMBR1-214ENST00000461469 WASHC2CQ9Y4E1 1318 aa36.72■■■■□ 3.47
LMBR1-214ENST00000461469 CEP170BQ9Y4F5 1589 aaPredicted RBP36.72■■■■□ 3.47
LMBR1-214ENST00000461469 CAMSAP1Q5T5Y3 1602 aa36.71■■■■□ 3.47
LMBR1-214ENST00000461469 PZPP20742 1482 aa36.71■■■■□ 3.47
LMBR1-214ENST00000461469 NCOA1Q15788 1441 aa36.71■■■■□ 3.47
LMBR1-214ENST00000461469 KIF15Q9NS87 1388 aa36.71■■■■□ 3.47
LMBR1-214ENST00000461469 ABCC3O15438 1527 aa36.69■■■■□ 3.46
LMBR1-214ENST00000461469 RRP7BPQ9NSQ0 103 aa36.68■■■■□ 3.46
LMBR1-214ENST00000461469 CEP152O94986 1710 aa36.67■■■■□ 3.46
LMBR1-214ENST00000461469 ZC3H13Q5T200 1668 aaKnown RBP36.64■■■■□ 3.46
LMBR1-214ENST00000461469 CHIC2Q9UKJ5 165 aa36.64■■■■□ 3.46
LMBR1-214ENST00000461469 TNRQ92752 1358 aa36.61■■■■□ 3.45
LMBR1-214ENST00000461469 ERBINQ96RT1 1412 aa36.6■■■■□ 3.45
LMBR1-214ENST00000461469 A2ML1A8K2U0 1454 aa36.6■■■■□ 3.45
LMBR1-214ENST00000461469 PTPRTO14522 1441 aa36.59■■■■□ 3.45
LMBR1-214ENST00000461469 FAM50AQ14320 339 aaKnown RBP36.58■■■■□ 3.45
LMBR1-214ENST00000461469 PRDM15P57071 1507 aaPredicted RBP36.58■■■■□ 3.45
LMBR1-214ENST00000461469 PPARGC1BQ86YN6 1023 aaKnown RBP36.57■■■■□ 3.44
LMBR1-214ENST00000461469 DMRT2Q9Y5R5 561 aa36.57■■■■□ 3.44
LMBR1-214ENST00000461469 DEPDC5O75140 1603 aa36.56■■■■□ 3.44
LMBR1-214ENST00000461469 NCKAP5LQ9HCH0 1330 aa36.56■■■■□ 3.44
LMBR1-214ENST00000461469 FBXO41Q8TF61 875 aa36.54■■■■□ 3.44
LMBR1-214ENST00000461469 ADGRL2O95490 1459 aa36.54■■■■□ 3.44
LMBR1-214ENST00000461469 PLA2R1Q13018 1463 aa36.54■■■■□ 3.44
LMBR1-214ENST00000461469 ANKRD30AQ9BXX3 1397 aa36.53■■■■□ 3.44
LMBR1-214ENST00000461469 CFAP65Q6ZU64 1925 aaKnown RBP36.53■■■■□ 3.44
LMBR1-214ENST00000461469 SPATA31D1Q6ZQQ2 1576 aa36.51■■■■□ 3.44
LMBR1-214ENST00000461469 CERKQ8TCT0 537 aa36.49■■■■□ 3.43
LMBR1-214ENST00000461469 ERVK-7P63135 1459 aa36.48■■■■□ 3.43
LMBR1-214ENST00000461469 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.43■■■■□ 3.421e-8■■■□□ 15.2
LMBR1-214ENST00000461469 LTBP4Q8N2S1 1624 aa36.43■■■■□ 3.42
LMBR1-214ENST00000461469 NLRP1Q9C000 1473 aa36.43■■■■□ 3.42
LMBR1-214ENST00000461469 VWDEQ8N2E2 1590 aa36.42■■■■□ 3.42
LMBR1-214ENST00000461469 PKD2Q13563 968 aa36.39■■■■□ 3.42
LMBR1-214ENST00000461469 NEURL4Q96JN8 1562 aa36.39■■■■□ 3.42
LMBR1-214ENST00000461469 POLR1AO95602 1720 aaPredicted RBP36.39■■■■□ 3.42
LMBR1-214ENST00000461469 UGGT1Q9NYU2 1555 aa36.38■■■■□ 3.41
LMBR1-214ENST00000461469 ARHGAP31Q2M1Z3 1444 aa36.37■■■■□ 3.41
LMBR1-214ENST00000461469 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.36■■■■□ 3.414e-7■■■■□ 21.6
LMBR1-214ENST00000461469 LMTK2Q8IWU2 1503 aa36.34■■■■□ 3.41
LMBR1-214ENST00000461469 ANKRD50Q9ULJ7 1429 aa36.33■■■■□ 3.41
LMBR1-214ENST00000461469 ZNF335Q9H4Z2 1342 aaPredicted RBP36.3■■■■□ 3.4
LMBR1-214ENST00000461469 KANK1Q14678 1352 aa36.29■■■■□ 3.4
LMBR1-214ENST00000461469 UBR1Q8IWV7 1749 aa36.29■■■■□ 3.4
LMBR1-214ENST00000461469 THEMISQ8N1K5 641 aaPredicted RBP36.25■■■■□ 3.39
LMBR1-214ENST00000461469 EFCAB6Q5THR3 1501 aa36.24■■■■□ 3.39
LMBR1-214ENST00000461469 ROCK1Q13464 1354 aa36.23■■■■□ 3.39
LMBR1-214ENST00000461469 ITGAEP38570 1179 aa36.22■■■■□ 3.39
LMBR1-214ENST00000461469 UNC13BO14795 1591 aa36.21■■■■□ 3.39
LMBR1-214ENST00000461469 SYNMO15061 1565 aa36.21■■■■□ 3.39
LMBR1-214ENST00000461469 PIK3C2BO00750 1634 aa36.2■■■■□ 3.39
LMBR1-214ENST00000461469 ANKLE2Q86XL3 938 aa36.18■■■■□ 3.38
LMBR1-214ENST00000461469 MED14O60244 1454 aa36.17■■■■□ 3.38
LMBR1-214ENST00000461469 RRBP1Q9P2E9 1410 aaKnown RBP36.16■■■■□ 3.38
LMBR1-214ENST00000461469 NPHP4O75161 1426 aaPredicted RBP36.14■■■■□ 3.38
LMBR1-214ENST00000461469 NOS1P29475 1434 aa36.14■■■■□ 3.38
LMBR1-214ENST00000461469 TET3O43151 1660 aa36.13■■■■□ 3.37
LMBR1-214ENST00000461469 IQGAP1P46940 1657 aa36.13■■■■□ 3.37
LMBR1-214ENST00000461469 ARHGAP23Q9P227 1491 aa36.11■■■■□ 3.37
LMBR1-214ENST00000461469 IQSEC2Q5JU85 1478 aa36.09■■■■□ 3.37
LMBR1-214ENST00000461469 GCC2Q8IWJ2 1684 aa36.09■■■■□ 3.37
LMBR1-214ENST00000461469 SLIT1O75093 1534 aa36.08■■■■□ 3.37
LMBR1-214ENST00000461469 IDI1Q13907 227 aa36.08■■■■□ 3.37
LMBR1-214ENST00000461469 LTKP29376 864 aa36.05■■■■□ 3.36
LMBR1-214ENST00000461469 IQGAP3Q86VI3 1631 aa36.05■■■■□ 3.36
LMBR1-214ENST00000461469 E9PCH4 1651 aa36.04■■■■□ 3.36
LMBR1-214ENST00000461469 RPRD2Q5VT52 1461 aaKnown RBP36.04■■■■□ 3.36
LMBR1-214ENST00000461469 SCAF11Q99590 1463 aaKnown RBP36.04■■■■□ 3.36
LMBR1-214ENST00000461469 KDM5AP29375 1690 aaKnown RBP36.03■■■■□ 3.36
LMBR1-214ENST00000461469 STRCP1A6NGW2 1772 aa36.02■■■■□ 3.36
LMBR1-214ENST00000461469 TMEM2Q9UHN6 1383 aa35.98■■■■□ 3.35
LMBR1-214ENST00000461469 ADGRB3O60242 1522 aa35.98■■■■□ 3.35
LMBR1-214ENST00000461469 MYO5BQ9ULV0 1848 aa35.97■■■■□ 3.35
LMBR1-214ENST00000461469 TXNDC2Q86VQ3 553 aa35.96■■■■□ 3.35
LMBR1-214ENST00000461469 CPS1P31327 1500 aa35.94■■■■□ 3.34
LMBR1-214ENST00000461469 NUP155O75694 1391 aa35.93■■■■□ 3.34
LMBR1-214ENST00000461469 STAG3Q9UJ98 1225 aa35.92■■■■□ 3.34
LMBR1-214ENST00000461469 SLC52A1Q9NWF4 448 aa35.89■■■■□ 3.34
LMBR1-214ENST00000461469 NAIPQ13075 1403 aa35.89■■■■□ 3.34
LMBR1-214ENST00000461469 TMEM131LA2VDJ0 1609 aa35.86■■■■□ 3.33
LMBR1-214ENST00000461469 EID1Q9Y6B2 187 aa35.84■■■■□ 3.33
LMBR1-214ENST00000461469 UBAP1LF5GYI3 381 aa35.83■■■■□ 3.33
LMBR1-214ENST00000461469 LRRC7Q96NW7 1537 aa35.79■■■■□ 3.32
LMBR1-214ENST00000461469 ZFYVE9O95405 1425 aa35.79■■■■□ 3.32
LMBR1-214ENST00000461469 ALKQ9UM73 1620 aa35.77■■■■□ 3.32
LMBR1-214ENST00000461469 HFM1A2PYH4 1435 aa35.75■■■■□ 3.31
LMBR1-214ENST00000461469 SPHKAPQ2M3C7 1700 aa35.74■■■■□ 3.31
LMBR1-214ENST00000461469 XIRP1Q702N8 1843 aaKnown RBP35.73■■■■□ 3.31
LMBR1-214ENST00000461469 RIMS2Q9UQ26 1411 aa35.72■■■■□ 3.31
LMBR1-214ENST00000461469 SENP3Q9H4L4 574 aaPredicted RBP35.71■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms