RNA–Protein interactions for RNA: ENST00000461306.1

ITGB5-203, Transcript of integrin subunit beta 5, humanhuman

TSL 4

Gene ITGB5, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-203ENST00000461306 TNRQ92752 1358 aa17.42■□□□□ 0.38
ITGB5-203ENST00000461306 RTEL1-TNFRSF6BF6WH68 1400 aa17.42■□□□□ 0.38
ITGB5-203ENST00000461306 HSPA1LP34931 641 aa17.42■□□□□ 0.38
ITGB5-203ENST00000461306 DNMT1P26358 1616 aaKnown RBP17.42■□□□□ 0.38
ITGB5-203ENST00000461306 TOM1O60784 492 aa17.41■□□□□ 0.38
ITGB5-203ENST00000461306 ANKLE2Q86XL3 938 aa17.4■□□□□ 0.38
ITGB5-203ENST00000461306 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.4■□□□□ 0.38
ITGB5-203ENST00000461306 EHBP1L1Q8N3D4 1523 aa17.38■□□□□ 0.37
ITGB5-203ENST00000461306 THEMISQ8N1K5 641 aaPredicted RBP17.38■□□□□ 0.37
ITGB5-203ENST00000461306 SENP3Q9H4L4 574 aaPredicted RBP17.38■□□□□ 0.37
ITGB5-203ENST00000461306 CEP162Q5TB80 1403 aa17.38■□□□□ 0.37
ITGB5-203ENST00000461306 TSPY4P0CV99 314 aa17.37■□□□□ 0.37
ITGB5-203ENST00000461306 TSPY10P0CW01 314 aa17.37■□□□□ 0.37
ITGB5-203ENST00000461306 MED1Q15648 1581 aaPredicted RBP17.36■□□□□ 0.37
ITGB5-203ENST00000461306 RSPH4AQ5TD94 716 aa17.36■□□□□ 0.37
ITGB5-203ENST00000461306 SHANK2Q9UPX8 1470 aa17.36■□□□□ 0.37
ITGB5-203ENST00000461306 CCDC141Q6ZP82 1450 aa17.35■□□□□ 0.37
ITGB5-203ENST00000461306 PZPP20742 1482 aa17.34■□□□□ 0.37
ITGB5-203ENST00000461306 CAMSAP2Q08AD1 1489 aa17.34■□□□□ 0.37
ITGB5-203ENST00000461306 MIA2Q96PC5 1412 aa17.34■□□□□ 0.37
ITGB5-203ENST00000461306 NCOA2Q15596 1464 aa17.33■□□□□ 0.37
ITGB5-203ENST00000461306 POLR1AO95602 1720 aaPredicted RBP17.33■□□□□ 0.36
ITGB5-203ENST00000461306 NEURL4Q96JN8 1562 aa17.32■□□□□ 0.36
ITGB5-203ENST00000461306 KDM5DQ9BY66 1539 aa17.32■□□□□ 0.36
ITGB5-203ENST00000461306 CPS1P31327 1500 aa17.31■□□□□ 0.36
ITGB5-203ENST00000461306 UGGT1Q9NYU2 1555 aa17.3■□□□□ 0.36
ITGB5-203ENST00000461306 NPHP4O75161 1426 aaPredicted RBP17.3■□□□□ 0.36
ITGB5-203ENST00000461306 FAM135AQ9P2D6 1515 aa17.29■□□□□ 0.36
ITGB5-203ENST00000461306 PHF23Q9BUL5 403 aaPredicted RBP17.28■□□□□ 0.36
ITGB5-203ENST00000461306 NLRP1Q9C000 1473 aa17.27■□□□□ 0.36
ITGB5-203ENST00000461306 VWDEQ8N2E2 1590 aa17.26■□□□□ 0.35
ITGB5-203ENST00000461306 CFAP65Q6ZU64 1925 aaKnown RBP17.25■□□□□ 0.35
ITGB5-203ENST00000461306 ALKQ9UM73 1620 aa17.25■□□□□ 0.35
ITGB5-203ENST00000461306 MED14O60244 1454 aa17.23■□□□□ 0.35
ITGB5-203ENST00000461306 ARHGEF5Q12774 1597 aa17.22■□□□□ 0.35
ITGB5-203ENST00000461306 LOC105371045A0A1W2PR82 267 aa17.21■□□□□ 0.35
ITGB5-203ENST00000461306 KANK4Q5T7N3 995 aaPredicted RBP17.21■□□□□ 0.35
ITGB5-203ENST00000461306 DEPDC5O75140 1603 aa17.21■□□□□ 0.35
ITGB5-203ENST00000461306 IQGAP1P46940 1657 aa17.2■□□□□ 0.34
ITGB5-203ENST00000461306 ABCC3O15438 1527 aa17.2■□□□□ 0.34
ITGB5-203ENST00000461306 TXNDC2Q86VQ3 553 aa17.19■□□□□ 0.34
ITGB5-203ENST00000461306 LRRC7Q96NW7 1537 aa17.19■□□□□ 0.34
ITGB5-203ENST00000461306 LTKP29376 864 aa17.18■□□□□ 0.34
ITGB5-203ENST00000461306 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.18■□□□□ 0.34
ITGB5-203ENST00000461306 ERVK-7P63135 1459 aa17.18■□□□□ 0.34
ITGB5-203ENST00000461306 LRRC9Q6ZRR7 1453 aa17.18■□□□□ 0.34
ITGB5-203ENST00000461306 STRCP1A6NGW2 1772 aa17.17■□□□□ 0.34
ITGB5-203ENST00000461306 RRP7BPQ9NSQ0 103 aa17.16■□□□□ 0.34
ITGB5-203ENST00000461306 RNF17Q9BXT8 1623 aaKnown RBP17.15■□□□□ 0.34
ITGB5-203ENST00000461306 STAG3Q9UJ98 1225 aa17.14■□□□□ 0.33
ITGB5-203ENST00000461306 EID1Q9Y6B2 187 aa17.14■□□□□ 0.33
ITGB5-203ENST00000461306 CEP152O94986 1710 aa17.13■□□□□ 0.33
ITGB5-203ENST00000461306 MAST1Q9Y2H9 1570 aa17.13■□□□□ 0.33
ITGB5-203ENST00000461306 ZC3H13Q5T200 1668 aaKnown RBP17.13■□□□□ 0.33
ITGB5-203ENST00000461306 VPS8Q8N3P4 1428 aa17.13■□□□□ 0.33
ITGB5-203ENST00000461306 SCAF11Q99590 1463 aaKnown RBP17.12■□□□□ 0.33
ITGB5-203ENST00000461306 UBR1Q8IWV7 1749 aa17.11■□□□□ 0.33
ITGB5-203ENST00000461306 MYOM3Q5VTT5 1437 aa17.11■□□□□ 0.33
ITGB5-203ENST00000461306 MROH1Q8NDA8 1641 aa17.1■□□□□ 0.33
ITGB5-203ENST00000461306 RGS17Q9UGC6 210 aaPredicted RBP17.1■□□□□ 0.33
ITGB5-203ENST00000461306 EIF2AK4Q9P2K8 1649 aaKnown RBP17.1■□□□□ 0.33
ITGB5-203ENST00000461306 CHIC2Q9UKJ5 165 aa17.09■□□□□ 0.33
ITGB5-203ENST00000461306 KIF15Q9NS87 1388 aa17.09■□□□□ 0.33
ITGB5-203ENST00000461306 DUOX2Q9NRD8 1548 aa17.09■□□□□ 0.33
ITGB5-203ENST00000461306 SYNMO15061 1565 aa17.08■□□□□ 0.32
ITGB5-203ENST00000461306 RBM33Q96EV2 1170 aaKnown RBP17.08■□□□□ 0.32
ITGB5-203ENST00000461306 IDI1Q13907 227 aa17.06■□□□□ 0.32
ITGB5-203ENST00000461306 BCANQ96GW7 911 aa17.06■□□□□ 0.32
ITGB5-203ENST00000461306 SLC26A8Q96RN1 970 aa17.06■□□□□ 0.32
ITGB5-203ENST00000461306 ARHGAP23Q9P227 1491 aa17.05■□□□□ 0.32
ITGB5-203ENST00000461306 APLP2Q06481 763 aa17.05■□□□□ 0.32
ITGB5-203ENST00000461306 PROSER2Q86WR7 435 aaPredicted RBP17.05■□□□□ 0.32
ITGB5-203ENST00000461306 KANK1Q14678 1352 aa17.04■□□□□ 0.32
ITGB5-203ENST00000461306 SLIT1O75093 1534 aa17.04■□□□□ 0.32
ITGB5-203ENST00000461306 ABCC5O15440 1437 aa17.04■□□□□ 0.32
ITGB5-203ENST00000461306 ARHGAP31Q2M1Z3 1444 aa17.04■□□□□ 0.32
ITGB5-203ENST00000461306 TMEM2Q9UHN6 1383 aa17.03■□□□□ 0.32
ITGB5-203ENST00000461306 XIRP1Q702N8 1843 aaKnown RBP17.03■□□□□ 0.32
ITGB5-203ENST00000461306 KCNA6P17658 529 aa17.02■□□□□ 0.32
ITGB5-203ENST00000461306 PIK3C2BO00750 1634 aa17.02■□□□□ 0.31
ITGB5-203ENST00000461306 TMEM94Q12767 1356 aa17.02■□□□□ 0.31
ITGB5-203ENST00000461306 ERBINQ96RT1 1412 aa17.01■□□□□ 0.31
ITGB5-203ENST00000461306 MAP3K1Q13233 1512 aa17.01■□□□□ 0.31
ITGB5-203ENST00000461306 FAM135BQ49AJ0 1406 aa16.99■□□□□ 0.31
ITGB5-203ENST00000461306 POTEAQ6S8J7 498 aa16.99■□□□□ 0.31
ITGB5-203ENST00000461306 PRDM15P57071 1507 aaPredicted RBP16.99■□□□□ 0.31
ITGB5-203ENST00000461306 DAPK1P53355 1430 aa16.98■□□□□ 0.31
ITGB5-203ENST00000461306 PTPN23Q9H3S7 1636 aa16.98■□□□□ 0.31
ITGB5-203ENST00000461306 EFCAB6Q5THR3 1501 aa16.96■□□□□ 0.31
ITGB5-203ENST00000461306 ANKRD30AQ9BXX3 1397 aa16.96■□□□□ 0.31
ITGB5-203ENST00000461306 CROCC2H7BZ55 1655 aa16.95■□□□□ 0.3
ITGB5-203ENST00000461306 SLAIN2Q9P270 581 aa16.93■□□□□ 0.3
ITGB5-203ENST00000461306 TET3O43151 1660 aa16.92■□□□□ 0.3
ITGB5-203ENST00000461306 ROBO1Q9Y6N7 1651 aa16.92■□□□□ 0.3
ITGB5-203ENST00000461306 PPP1R15AO75807 674 aaPredicted RBP16.92■□□□□ 0.3
ITGB5-203ENST00000461306 FAM50AQ14320 339 aaKnown RBP16.92■□□□□ 0.3
ITGB5-203ENST00000461306 SLC52A1Q9NWF4 448 aa16.92■□□□□ 0.3
ITGB5-203ENST00000461306 FGD6Q6ZV73 1430 aa16.92■□□□□ 0.3
ITGB5-203ENST00000461306 CHGAP10645 457 aaKnown RBP16.91■□□□□ 0.3
ITGB5-203ENST00000461306 MSH6P52701 1360 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms