RNA–Protein interactions for RNA: ENST00000461219.5

SCAF8-204, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-204ENST00000461219 RRP7BPQ9NSQ0 103 aa31.45■■■□□ 2.63
SCAF8-204ENST00000461219 ZMYM3Q14202 1370 aa31.43■■■□□ 2.62
SCAF8-204ENST00000461219 ANKRD30AQ9BXX3 1397 aa31.43■■■□□ 2.62
SCAF8-204ENST00000461219 UHRF1BP1Q6BDS2 1440 aa31.41■■■□□ 2.62
SCAF8-204ENST00000461219 KDM5DQ9BY66 1539 aa31.41■■■□□ 2.62
SCAF8-204ENST00000461219 WASHC2CQ9Y4E1 1318 aa31.41■■■□□ 2.62
SCAF8-204ENST00000461219 RNF17Q9BXT8 1623 aaKnown RBP31.4■■■□□ 2.62
SCAF8-204ENST00000461219 FAM135AQ9P2D6 1515 aa31.39■■■□□ 2.62
SCAF8-204ENST00000461219 HSPA2P54652 639 aa31.36■■■□□ 2.61
SCAF8-204ENST00000461219 ERBINQ96RT1 1412 aa31.35■■■□□ 2.61
SCAF8-204ENST00000461219 ZC3H13Q5T200 1668 aaKnown RBP31.35■■■□□ 2.61
SCAF8-204ENST00000461219 NPATQ14207 1427 aa31.34■■■□□ 2.61
SCAF8-204ENST00000461219 CEP152O94986 1710 aa31.32■■■□□ 2.6
SCAF8-204ENST00000461219 ITGAEP38570 1179 aa31.31■■■□□ 2.6
SCAF8-204ENST00000461219 NCOA1Q15788 1441 aa31.3■■■□□ 2.6
SCAF8-204ENST00000461219 ADGRL2O95490 1459 aa31.29■■■□□ 2.6
SCAF8-204ENST00000461219 CFAP65Q6ZU64 1925 aaKnown RBP31.27■■■□□ 2.6
SCAF8-204ENST00000461219 PTPRKQ15262 1439 aa31.26■■■□□ 2.6
SCAF8-204ENST00000461219 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.26■■■□□ 2.59
SCAF8-204ENST00000461219 MYO3AQ8NEV4 1616 aa31.26■■■□□ 2.59
SCAF8-204ENST00000461219 KANK1Q14678 1352 aa31.25■■■□□ 2.59
SCAF8-204ENST00000461219 ABCC3O15438 1527 aa31.24■■■□□ 2.59
SCAF8-204ENST00000461219 MROH1Q8NDA8 1641 aa31.24■■■□□ 2.59
SCAF8-204ENST00000461219 PZPP20742 1482 aa31.23■■■□□ 2.59
SCAF8-204ENST00000461219 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.22■■■□□ 2.593e-7■□□□□ 9.3
SCAF8-204ENST00000461219 CAMSAP1Q5T5Y3 1602 aa31.22■■■□□ 2.59
SCAF8-204ENST00000461219 DEPDC5O75140 1603 aa31.21■■■□□ 2.59
SCAF8-204ENST00000461219 PRDM15P57071 1507 aaPredicted RBP31.21■■■□□ 2.59
SCAF8-204ENST00000461219 ZNF142P52746 1687 aaPredicted RBP31.19■■■□□ 2.58
SCAF8-204ENST00000461219 ANKRD50Q9ULJ7 1429 aa31.17■■■□□ 2.58
SCAF8-204ENST00000461219 CEP170BQ9Y4F5 1589 aaPredicted RBP31.16■■■□□ 2.58
SCAF8-204ENST00000461219 TNRQ92752 1358 aa31.16■■■□□ 2.58
SCAF8-204ENST00000461219 RRBP1Q9P2E9 1410 aaKnown RBP31.15■■■□□ 2.58
SCAF8-204ENST00000461219 FBXO31Q5XUX0 539 aaPredicted RBP31.15■■■□□ 2.58
SCAF8-204ENST00000461219 ROCK1Q13464 1354 aa31.14■■■□□ 2.58
SCAF8-204ENST00000461219 STRCQ7RTU9 1775 aa31.11■■■□□ 2.57
SCAF8-204ENST00000461219 DMRT2Q9Y5R5 561 aa31.08■■■□□ 2.57
SCAF8-204ENST00000461219 A2ML1A8K2U0 1454 aa31.08■■■□□ 2.57
SCAF8-204ENST00000461219 SPATA31D1Q6ZQQ2 1576 aa31.05■■■□□ 2.56
SCAF8-204ENST00000461219 ERVK-7P63135 1459 aa31.04■■■□□ 2.56
SCAF8-204ENST00000461219 NLRP1Q9C000 1473 aa31.02■■■□□ 2.56
SCAF8-204ENST00000461219 UNC13BO14795 1591 aa31■■■□□ 2.55
SCAF8-204ENST00000461219 VWDEQ8N2E2 1590 aa31■■■□□ 2.55
SCAF8-204ENST00000461219 ARHGAP31Q2M1Z3 1444 aa31■■■□□ 2.55
SCAF8-204ENST00000461219 LMTK2Q8IWU2 1503 aa30.99■■■□□ 2.55
SCAF8-204ENST00000461219 UGGT1Q9NYU2 1555 aa30.97■■■□□ 2.55
SCAF8-204ENST00000461219 EFCAB6Q5THR3 1501 aa30.97■■■□□ 2.55
SCAF8-204ENST00000461219 GCC2Q8IWJ2 1684 aa30.97■■■□□ 2.55
SCAF8-204ENST00000461219 TET3O43151 1660 aa30.96■■■□□ 2.55
SCAF8-204ENST00000461219 PLA2R1Q13018 1463 aa30.95■■■□□ 2.55
SCAF8-204ENST00000461219 POLR1AO95602 1720 aaPredicted RBP30.95■■■□□ 2.54
SCAF8-204ENST00000461219 THEMISQ8N1K5 641 aaPredicted RBP30.93■■■□□ 2.54
SCAF8-204ENST00000461219 NCKAP5LQ9HCH0 1330 aa30.93■■■□□ 2.54
SCAF8-204ENST00000461219 PKD2Q13563 968 aa30.92■■■□□ 2.54
SCAF8-204ENST00000461219 PTPRTO14522 1441 aa30.9■■■□□ 2.54
SCAF8-204ENST00000461219 IQGAP3Q86VI3 1631 aa30.9■■■□□ 2.54
SCAF8-204ENST00000461219 NUP155O75694 1391 aa30.89■■■□□ 2.54
SCAF8-204ENST00000461219 STAG3Q9UJ98 1225 aa30.88■■■□□ 2.53
SCAF8-204ENST00000461219 UBR1Q8IWV7 1749 aa30.87■■■□□ 2.53
SCAF8-204ENST00000461219 RPRD2Q5VT52 1461 aaKnown RBP30.86■■■□□ 2.53
SCAF8-204ENST00000461219 PIK3C2BO00750 1634 aa30.84■■■□□ 2.53
SCAF8-204ENST00000461219 ANKLE2Q86XL3 938 aa30.83■■■□□ 2.53
SCAF8-204ENST00000461219 E9PCH4 1651 aa30.82■■■□□ 2.52
SCAF8-204ENST00000461219 NAIPQ13075 1403 aa30.81■■■□□ 2.52
SCAF8-204ENST00000461219 SYNMO15061 1565 aa30.8■■■□□ 2.52
SCAF8-204ENST00000461219 HFM1A2PYH4 1435 aa30.79■■■□□ 2.52
SCAF8-204ENST00000461219 NOS1P29475 1434 aa30.76■■■□□ 2.51
SCAF8-204ENST00000461219 TRIM52Q96A61 297 aa30.76■■■□□ 2.51
SCAF8-204ENST00000461219 KDM5AP29375 1690 aaKnown RBP30.75■■■□□ 2.51
SCAF8-204ENST00000461219 SLC52A1Q9NWF4 448 aa30.74■■■□□ 2.51
SCAF8-204ENST00000461219 IDI1Q13907 227 aa30.73■■■□□ 2.51
SCAF8-204ENST00000461219 NEURL4Q96JN8 1562 aa30.72■■■□□ 2.51
SCAF8-204ENST00000461219 IQGAP1P46940 1657 aa30.71■■■□□ 2.51
SCAF8-204ENST00000461219 EID1Q9Y6B2 187 aa30.71■■■□□ 2.51
SCAF8-204ENST00000461219 CERKQ8TCT0 537 aa30.7■■■□□ 2.51
SCAF8-204ENST00000461219 MYO5BQ9ULV0 1848 aa30.7■■■□□ 2.5
SCAF8-204ENST00000461219 ADGRB3O60242 1522 aa30.69■■■□□ 2.5
SCAF8-204ENST00000461219 SPHKAPQ2M3C7 1700 aa30.68■■■□□ 2.5
SCAF8-204ENST00000461219 NPHP4O75161 1426 aaPredicted RBP30.68■■■□□ 2.5
SCAF8-204ENST00000461219 SCAF11Q99590 1463 aaKnown RBP30.66■■■□□ 2.5
SCAF8-204ENST00000461219 CHGAP10645 457 aaKnown RBP30.66■■■□□ 2.5
SCAF8-204ENST00000461219 TXNDC2Q86VQ3 553 aa30.66■■■□□ 2.5
SCAF8-204ENST00000461219 SLIT1O75093 1534 aa30.65■■■□□ 2.5
SCAF8-204ENST00000461219 ILDR1Q86SU0 546 aaPredicted RBP30.63■■■□□ 2.49
SCAF8-204ENST00000461219 MED14O60244 1454 aa30.63■■■□□ 2.49
SCAF8-204ENST00000461219 ZNF335Q9H4Z2 1342 aaPredicted RBP30.62■■■□□ 2.49
SCAF8-204ENST00000461219 TMEM2Q9UHN6 1383 aa30.62■■■□□ 2.49
SCAF8-204ENST00000461219 FBXO41Q8TF61 875 aa30.61■■■□□ 2.49
SCAF8-204ENST00000461219 ARHGAP23Q9P227 1491 aa30.61■■■□□ 2.49
SCAF8-204ENST00000461219 LTBP4Q8N2S1 1624 aa30.58■■■□□ 2.49
SCAF8-204ENST00000461219 SLC4A1APQ9BWU0 796 aaKnown RBP30.58■■■□□ 2.49
SCAF8-204ENST00000461219 TMEM131LA2VDJ0 1609 aa30.57■■■□□ 2.48
SCAF8-204ENST00000461219 LTKP29376 864 aa30.56■■■□□ 2.48
SCAF8-204ENST00000461219 HDGFP51858 240 aaKnown RBP30.55■■■□□ 2.48
SCAF8-204ENST00000461219 BCANQ96GW7 911 aa30.55■■■□□ 2.48
SCAF8-204ENST00000461219 PPP1R15AO75807 674 aaPredicted RBP30.54■■■□□ 2.48
SCAF8-204ENST00000461219 KIF1BO60333 1816 aa30.52■■■□□ 2.48
SCAF8-204ENST00000461219 SETD5Q9C0A6 1442 aa30.52■■■□□ 2.48
SCAF8-204ENST00000461219 ACIN1Q9UKV3 1341 aaKnown RBP30.5■■■□□ 2.47
SCAF8-204ENST00000461219 RIMS2Q9UQ26 1411 aa30.47■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms