RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 DHX29Q7Z478 1369 aaKnown RBP23.29■■□□□ 1.32
NCK1-202ENST00000460960 TNRQ92752 1358 aa23.28■■□□□ 1.32
NCK1-202ENST00000460960 POLR1AO95602 1720 aaPredicted RBP23.28■■□□□ 1.32
NCK1-202ENST00000460960 RTEL1-TNFRSF6BF6WH68 1400 aa23.28■■□□□ 1.32
NCK1-202ENST00000460960 PIP4K2BP78356 416 aa23.28■■□□□ 1.32
NCK1-202ENST00000460960 FBXO31Q5XUX0 539 aaPredicted RBP23.28■■□□□ 1.32
NCK1-202ENST00000460960 CCDC141Q6ZP82 1450 aa23.24■■□□□ 1.31
NCK1-202ENST00000460960 KDM5DQ9BY66 1539 aa23.24■■□□□ 1.31
NCK1-202ENST00000460960 WASHC2CQ9Y4E1 1318 aa23.24■■□□□ 1.31
NCK1-202ENST00000460960 PZPP20742 1482 aa23.22■■□□□ 1.31
NCK1-202ENST00000460960 CAMSAP2Q08AD1 1489 aa23.22■■□□□ 1.31
NCK1-202ENST00000460960 NEURL4Q96JN8 1562 aa23.22■■□□□ 1.31
NCK1-202ENST00000460960 HSPA1LP34931 641 aa23.21■■□□□ 1.31
NCK1-202ENST00000460960 VPS8Q8N3P4 1428 aa23.21■■□□□ 1.31
NCK1-202ENST00000460960 CPS1P31327 1500 aa23.2■■□□□ 1.3
NCK1-202ENST00000460960 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.2■■□□□ 1.3
NCK1-202ENST00000460960 TOM1O60784 492 aa23.2■■□□□ 1.3
NCK1-202ENST00000460960 NCOA2Q15596 1464 aa23.19■■□□□ 1.3
NCK1-202ENST00000460960 SHANK2Q9UPX8 1470 aa23.19■■□□□ 1.3
NCK1-202ENST00000460960 ANKLE2Q86XL3 938 aa23.19■■□□□ 1.3
NCK1-202ENST00000460960 THEMISQ8N1K5 641 aaPredicted RBP23.16■■□□□ 1.3
NCK1-202ENST00000460960 FAM135AQ9P2D6 1515 aa23.16■■□□□ 1.3
NCK1-202ENST00000460960 RSPH4AQ5TD94 716 aa23.15■■□□□ 1.3
NCK1-202ENST00000460960 MED1Q15648 1581 aaPredicted RBP23.14■■□□□ 1.3
NCK1-202ENST00000460960 UGGT1Q9NYU2 1555 aa23.14■■□□□ 1.3
NCK1-202ENST00000460960 TSPY4P0CV99 314 aa23.14■■□□□ 1.29
NCK1-202ENST00000460960 TSPY10P0CW01 314 aa23.14■■□□□ 1.29
NCK1-202ENST00000460960 MIA2Q96PC5 1412 aa23.14■■□□□ 1.29
NCK1-202ENST00000460960 NLRP1Q9C000 1473 aa23.13■■□□□ 1.29
NCK1-202ENST00000460960 NPHP4O75161 1426 aaPredicted RBP23.12■■□□□ 1.29
NCK1-202ENST00000460960 SENP3Q9H4L4 574 aaPredicted RBP23.12■■□□□ 1.29
NCK1-202ENST00000460960 VWDEQ8N2E2 1590 aa23.1■■□□□ 1.29
NCK1-202ENST00000460960 ARHGEF5Q12774 1597 aa23.1■■□□□ 1.29
NCK1-202ENST00000460960 DEPDC5O75140 1603 aa23.08■■□□□ 1.28
NCK1-202ENST00000460960 IQGAP1P46940 1657 aa23.07■■□□□ 1.28
NCK1-202ENST00000460960 PHF23Q9BUL5 403 aaPredicted RBP23.07■■□□□ 1.28
NCK1-202ENST00000460960 MED14O60244 1454 aa23.05■■□□□ 1.28
NCK1-202ENST00000460960 ABCC3O15438 1527 aa23.04■■□□□ 1.28
NCK1-202ENST00000460960 RNF17Q9BXT8 1623 aaKnown RBP23.04■■□□□ 1.28
NCK1-202ENST00000460960 CFAP65Q6ZU64 1925 aaKnown RBP23.04■■□□□ 1.28
NCK1-202ENST00000460960 ZC3H13Q5T200 1668 aaKnown RBP23.03■■□□□ 1.28
NCK1-202ENST00000460960 CEP152O94986 1710 aa22.99■■□□□ 1.27
NCK1-202ENST00000460960 ERVK-7P63135 1459 aa22.99■■□□□ 1.27
NCK1-202ENST00000460960 STRCP1A6NGW2 1772 aa22.99■■□□□ 1.27
NCK1-202ENST00000460960 LRRC9Q6ZRR7 1453 aa22.98■■□□□ 1.27
NCK1-202ENST00000460960 ALKQ9UM73 1620 aa22.98■■□□□ 1.27
NCK1-202ENST00000460960 MAST1Q9Y2H9 1570 aa22.97■■□□□ 1.27
NCK1-202ENST00000460960 EIF2AK4Q9P2K8 1649 aaKnown RBP22.97■■□□□ 1.27
NCK1-202ENST00000460960 LRRC7Q96NW7 1537 aa22.97■■□□□ 1.27
NCK1-202ENST00000460960 KANK4Q5T7N3 995 aaPredicted RBP22.96■■□□□ 1.27
NCK1-202ENST00000460960 SYNMO15061 1565 aa22.95■■□□□ 1.26
NCK1-202ENST00000460960 UBR1Q8IWV7 1749 aa22.94■■□□□ 1.26
NCK1-202ENST00000460960 MROH1Q8NDA8 1641 aa22.93■■□□□ 1.26
NCK1-202ENST00000460960 MAP3K1Q13233 1512 aa22.93■■□□□ 1.26
NCK1-202ENST00000460960 SCAF11Q99590 1463 aaKnown RBP22.92■■□□□ 1.26
NCK1-202ENST00000460960 DUOX2Q9NRD8 1548 aa22.89■■□□□ 1.26
NCK1-202ENST00000460960 TXNDC2Q86VQ3 553 aa22.89■■□□□ 1.25
NCK1-202ENST00000460960 MYOM3Q5VTT5 1437 aa22.89■■□□□ 1.25
NCK1-202ENST00000460960 LTKP29376 864 aa22.87■■□□□ 1.25
NCK1-202ENST00000460960 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.87■■□□□ 1.253e-8■■■□□ 14.9
NCK1-202ENST00000460960 EID1Q9Y6B2 187 aa22.86■■□□□ 1.25
NCK1-202ENST00000460960 KIF15Q9NS87 1388 aa22.86■■□□□ 1.25
NCK1-202ENST00000460960 STAG3Q9UJ98 1225 aa22.85■■□□□ 1.25
NCK1-202ENST00000460960 RRP7BPQ9NSQ0 103 aa22.84■■□□□ 1.25
NCK1-202ENST00000460960 ARHGAP23Q9P227 1491 aa22.82■■□□□ 1.24
NCK1-202ENST00000460960 SLIT1O75093 1534 aa22.82■■□□□ 1.24
NCK1-202ENST00000460960 PRDM15P57071 1507 aaPredicted RBP22.82■■□□□ 1.24
NCK1-202ENST00000460960 APLP2Q06481 763 aa22.81■■□□□ 1.24
NCK1-202ENST00000460960 PIK3C2BO00750 1634 aa22.81■■□□□ 1.24
NCK1-202ENST00000460960 CROCC2H7BZ55 1655 aa22.8■■□□□ 1.24
NCK1-202ENST00000460960 XIRP1Q702N8 1843 aaKnown RBP22.8■■□□□ 1.24
NCK1-202ENST00000460960 ARHGAP31Q2M1Z3 1444 aa22.79■■□□□ 1.24
NCK1-202ENST00000460960 ERBINQ96RT1 1412 aa22.79■■□□□ 1.24
NCK1-202ENST00000460960 KANK1Q14678 1352 aa22.78■■□□□ 1.24
NCK1-202ENST00000460960 PPARGC1BQ86YN6 1023 aaKnown RBP22.77■■□□□ 1.24
NCK1-202ENST00000460960 ABCC5O15440 1437 aa22.76■■□□□ 1.23
NCK1-202ENST00000460960 PTPN23Q9H3S7 1636 aa22.76■■□□□ 1.23
NCK1-202ENST00000460960 TMEM2Q9UHN6 1383 aa22.76■■□□□ 1.23
NCK1-202ENST00000460960 CHIC2Q9UKJ5 165 aa22.73■■□□□ 1.23
NCK1-202ENST00000460960 EFCAB6Q5THR3 1501 aa22.72■■□□□ 1.23
NCK1-202ENST00000460960 TMEM94Q12767 1356 aa22.72■■□□□ 1.23
NCK1-202ENST00000460960 DAPK1P53355 1430 aa22.72■■□□□ 1.23
NCK1-202ENST00000460960 RBM33Q96EV2 1170 aaKnown RBP22.71■■□□□ 1.23
NCK1-202ENST00000460960 BCANQ96GW7 911 aa22.71■■□□□ 1.23
NCK1-202ENST00000460960 SLC26A8Q96RN1 970 aa22.71■■□□□ 1.23
NCK1-202ENST00000460960 RGS17Q9UGC6 210 aaPredicted RBP22.71■■□□□ 1.23
NCK1-202ENST00000460960 IDI1Q13907 227 aa22.7■■□□□ 1.22
NCK1-202ENST00000460960 PROSER2Q86WR7 435 aaPredicted RBP22.7■■□□□ 1.22
NCK1-202ENST00000460960 FAM135BQ49AJ0 1406 aa22.68■■□□□ 1.22
NCK1-202ENST00000460960 ANKRD30AQ9BXX3 1397 aa22.67■■□□□ 1.22
NCK1-202ENST00000460960 KCNA6P17658 529 aa22.67■■□□□ 1.22
NCK1-202ENST00000460960 ROBO1Q9Y6N7 1651 aa22.67■■□□□ 1.22
NCK1-202ENST00000460960 KDM5AP29375 1690 aaKnown RBP22.65■■□□□ 1.22
NCK1-202ENST00000460960 FGD6Q6ZV73 1430 aa22.65■■□□□ 1.22
NCK1-202ENST00000460960 ADGRB3O60242 1522 aa22.63■■□□□ 1.21
NCK1-202ENST00000460960 LMTK2Q8IWU2 1503 aa22.63■■□□□ 1.21
NCK1-202ENST00000460960 POTEAQ6S8J7 498 aa22.61■■□□□ 1.21
NCK1-202ENST00000460960 TET3O43151 1660 aa22.61■■□□□ 1.21
NCK1-202ENST00000460960 MSH6P52701 1360 aa22.6■■□□□ 1.21
NCK1-202ENST00000460960 NKTRP30414 1462 aaKnown RBP22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 150.6 ms