RNA–Protein interactions for RNA: ENST00000460125.1

NUCB1-208, Transcript of nucleobindin 1, humanhuman

TSL 2

Gene NUCB1, Length 528 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-208ENST00000460125 FBXO31Q5XUX0 539 aaPredicted RBP17.94■□□□□ 0.46
NUCB1-208ENST00000460125 CFDP1Q9UEE9 299 aaPredicted RBP17.94■□□□□ 0.46
NUCB1-208ENST00000460125 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.92■□□□□ 0.46
NUCB1-208ENST00000460125 RGS17Q9UGC6 210 aaPredicted RBP17.92■□□□□ 0.46
NUCB1-208ENST00000460125 THEMISQ8N1K5 641 aaPredicted RBP17.91■□□□□ 0.46
NUCB1-208ENST00000460125 MED14O60244 1454 aa17.9■□□□□ 0.46
NUCB1-208ENST00000460125 ADGBQ8N7X0 1667 aa17.9■□□□□ 0.46
NUCB1-208ENST00000460125 NPHP4O75161 1426 aaPredicted RBP17.89■□□□□ 0.46
NUCB1-208ENST00000460125 SENP3Q9H4L4 574 aaPredicted RBP17.89■□□□□ 0.45
NUCB1-208ENST00000460125 DHX29Q7Z478 1369 aaKnown RBP17.89■□□□□ 0.45
NUCB1-208ENST00000460125 PZPP20742 1482 aa17.88■□□□□ 0.45
NUCB1-208ENST00000460125 CCNB3Q8WWL7 1395 aa17.87■□□□□ 0.45
NUCB1-208ENST00000460125 FYCO1Q9BQS8 1478 aa17.87■□□□□ 0.45
NUCB1-208ENST00000460125 RTEL1-TNFRSF6BF6WH68 1400 aa17.86■□□□□ 0.45
NUCB1-208ENST00000460125 MIA2Q96PC5 1412 aa17.86■□□□□ 0.45
NUCB1-208ENST00000460125 LRRC7Q96NW7 1537 aa17.86■□□□□ 0.45
NUCB1-208ENST00000460125 DEPDC5O75140 1603 aa17.85■□□□□ 0.45
NUCB1-208ENST00000460125 NLRP1Q9C000 1473 aa17.84■□□□□ 0.45
NUCB1-208ENST00000460125 MBD5Q9P267 1494 aa17.84■□□□□ 0.45
NUCB1-208ENST00000460125 ZNF644Q9H582 1327 aaPredicted RBP17.84■□□□□ 0.45
NUCB1-208ENST00000460125 KIF3BO15066 747 aa17.84■□□□□ 0.45
NUCB1-208ENST00000460125 UGGT1Q9NYU2 1555 aa17.83■□□□□ 0.45
NUCB1-208ENST00000460125 FAM135AQ9P2D6 1515 aa17.83■□□□□ 0.45
NUCB1-208ENST00000460125 WASHC2CQ9Y4E1 1318 aa17.82■□□□□ 0.44
NUCB1-208ENST00000460125 KDM5DQ9BY66 1539 aa17.82■□□□□ 0.44
NUCB1-208ENST00000460125 STRCP1A6NGW2 1772 aa17.81■□□□□ 0.44
NUCB1-208ENST00000460125 RNF17Q9BXT8 1623 aaKnown RBP17.8■□□□□ 0.44
NUCB1-208ENST00000460125 IQGAP1P46940 1657 aa17.8■□□□□ 0.44
NUCB1-208ENST00000460125 POTEAQ6S8J7 498 aa17.78■□□□□ 0.44
NUCB1-208ENST00000460125 SYNMO15061 1565 aa17.78■□□□□ 0.44
NUCB1-208ENST00000460125 MTUS2Q5JR59 1369 aa17.76■□□□□ 0.43
NUCB1-208ENST00000460125 TIAM1Q13009 1591 aa17.73■□□□□ 0.43
NUCB1-208ENST00000460125 FAM135BQ49AJ0 1406 aa17.72■□□□□ 0.43
NUCB1-208ENST00000460125 RSPH4AQ5TD94 716 aa17.71■□□□□ 0.43
NUCB1-208ENST00000460125 ZC3H13Q5T200 1668 aaKnown RBP17.7■□□□□ 0.42
NUCB1-208ENST00000460125 CCDC141Q6ZP82 1450 aa17.69■□□□□ 0.42
NUCB1-208ENST00000460125 LTKP29376 864 aa17.67■□□□□ 0.42
NUCB1-208ENST00000460125 SCAF11Q99590 1463 aaKnown RBP17.67■□□□□ 0.42
NUCB1-208ENST00000460125 CEP162Q5TB80 1403 aa17.66■□□□□ 0.42
NUCB1-208ENST00000460125 ERVK-7P63135 1459 aa17.66■□□□□ 0.42
NUCB1-208ENST00000460125 TXNDC2Q86VQ3 553 aa17.65■□□□□ 0.42
NUCB1-208ENST00000460125 ABCC3O15438 1527 aa17.64■□□□□ 0.41
NUCB1-208ENST00000460125 XIRP1Q702N8 1843 aaKnown RBP17.64■□□□□ 0.41
NUCB1-208ENST00000460125 CHIC1Q5VXU3 224 aa17.64■□□□□ 0.41
NUCB1-208ENST00000460125 NCOA2Q15596 1464 aa17.63■□□□□ 0.41
NUCB1-208ENST00000460125 EHBP1L1Q8N3D4 1523 aa17.63■□□□□ 0.41
NUCB1-208ENST00000460125 ARHGAP23Q9P227 1491 aa17.63■□□□□ 0.41
NUCB1-208ENST00000460125 TSPY4P0CV99 314 aa17.62■□□□□ 0.41
NUCB1-208ENST00000460125 TSPY10P0CW01 314 aa17.62■□□□□ 0.41
NUCB1-208ENST00000460125 CAMSAP2Q08AD1 1489 aa17.62■□□□□ 0.41
NUCB1-208ENST00000460125 UBR1Q8IWV7 1749 aa17.61■□□□□ 0.41
NUCB1-208ENST00000460125 SLIT1O75093 1534 aa17.61■□□□□ 0.41
NUCB1-208ENST00000460125 TMEM94Q12767 1356 aa17.59■□□□□ 0.41
NUCB1-208ENST00000460125 EID1Q9Y6B2 187 aa17.59■□□□□ 0.41
NUCB1-208ENST00000460125 ARHGEF5Q12774 1597 aa17.57■□□□□ 0.4
NUCB1-208ENST00000460125 SETD1AO15047 1707 aaKnown RBP17.57■□□□□ 0.4
NUCB1-208ENST00000460125 ROBO1Q9Y6N7 1651 aa17.56■□□□□ 0.4
NUCB1-208ENST00000460125 KCNA6P17658 529 aa17.56■□□□□ 0.4
NUCB1-208ENST00000460125 UPF1Q92900 1129 aaKnown RBP eCLIP17.55■□□□□ 0.42e-7■□□□□ 9.8
NUCB1-208ENST00000460125 MROH1Q8NDA8 1641 aa17.54■□□□□ 0.4
NUCB1-208ENST00000460125 PROSER2Q86WR7 435 aaPredicted RBP17.53■□□□□ 0.4
NUCB1-208ENST00000460125 JCADQ9P266 1359 aa17.53■□□□□ 0.4
NUCB1-208ENST00000460125 TMEM2Q9UHN6 1383 aa17.53■□□□□ 0.4
NUCB1-208ENST00000460125 MAP3K1Q13233 1512 aa17.52■□□□□ 0.4
NUCB1-208ENST00000460125 LRRC9Q6ZRR7 1453 aa17.52■□□□□ 0.4
NUCB1-208ENST00000460125 RBM33Q96EV2 1170 aaKnown RBP17.52■□□□□ 0.4
NUCB1-208ENST00000460125 EIF2AK4Q9P2K8 1649 aaKnown RBP17.51■□□□□ 0.39
NUCB1-208ENST00000460125 ARHGAP31Q2M1Z3 1444 aa17.51■□□□□ 0.39
NUCB1-208ENST00000460125 CFAP65Q6ZU64 1925 aaKnown RBP17.51■□□□□ 0.39
NUCB1-208ENST00000460125 MAST1Q9Y2H9 1570 aa17.5■□□□□ 0.39
NUCB1-208ENST00000460125 SLAIN2Q9P270 581 aa17.49■□□□□ 0.39
NUCB1-208ENST00000460125 CEP152O94986 1710 aa17.49■□□□□ 0.39
NUCB1-208ENST00000460125 PRDM15P57071 1507 aaPredicted RBP17.48■□□□□ 0.39
NUCB1-208ENST00000460125 SLC26A8Q96RN1 970 aa17.48■□□□□ 0.39
NUCB1-208ENST00000460125 STAG3Q9UJ98 1225 aa17.47■□□□□ 0.39
NUCB1-208ENST00000460125 TET3O43151 1660 aa17.46■□□□□ 0.39
NUCB1-208ENST00000460125 MSH6P52701 1360 aa17.46■□□□□ 0.39
NUCB1-208ENST00000460125 ZNF772Q68DY9 489 aaPredicted RBP17.46■□□□□ 0.39
NUCB1-208ENST00000460125 PIK3C2BO00750 1634 aa17.46■□□□□ 0.39
NUCB1-208ENST00000460125 PHLPP1O60346 1717 aa17.45■□□□□ 0.38
NUCB1-208ENST00000460125 TRIM52Q96A61 297 aa17.45■□□□□ 0.38
NUCB1-208ENST00000460125 NKTRP30414 1462 aaKnown RBP17.44■□□□□ 0.38
NUCB1-208ENST00000460125 IDI1Q13907 227 aa17.44■□□□□ 0.38
NUCB1-208ENST00000460125 SPATA31A6Q5VVP1 1343 aa17.44■□□□□ 0.38
NUCB1-208ENST00000460125 DUOX2Q9NRD8 1548 aa17.43■□□□□ 0.38
NUCB1-208ENST00000460125 LRP6O75581 1613 aa17.43■□□□□ 0.38
NUCB1-208ENST00000460125 EFCAB6Q5THR3 1501 aa17.42■□□□□ 0.38
NUCB1-208ENST00000460125 NWD1Q149M9 1564 aa17.42■□□□□ 0.38
NUCB1-208ENST00000460125 FGD6Q6ZV73 1430 aa17.41■□□□□ 0.38
NUCB1-208ENST00000460125 MEX3CQ5U5Q3 659 aaKnown RBP17.41■□□□□ 0.38
NUCB1-208ENST00000460125 COL16A1Q07092 1604 aaPredicted RBP17.4■□□□□ 0.38
NUCB1-208ENST00000460125 KDM5AP29375 1690 aaKnown RBP17.4■□□□□ 0.38
NUCB1-208ENST00000460125 RXRBP28702 533 aa17.39■□□□□ 0.37
NUCB1-208ENST00000460125 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.38■□□□□ 0.375e-8■□□□□ 8.9
NUCB1-208ENST00000460125 BCANQ96GW7 911 aa17.36■□□□□ 0.37
NUCB1-208ENST00000460125 KIF15Q9NS87 1388 aa17.36■□□□□ 0.37
NUCB1-208ENST00000460125 ERBINQ96RT1 1412 aa17.36■□□□□ 0.37
NUCB1-208ENST00000460125 MYOM3Q5VTT5 1437 aa17.35■□□□□ 0.37
NUCB1-208ENST00000460125 CDK12Q9NYV4 1490 aaPredicted RBP17.35■□□□□ 0.37
NUCB1-208ENST00000460125 KANK1Q14678 1352 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms