RNA–Protein interactions for RNA: ENST00000459873.1

PCCB-202, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-202ENST00000459873 CEP152O94986 1710 aa14.04□□□□□ -0.16
PCCB-202ENST00000459873 VWDEQ8N2E2 1590 aa14.03□□□□□ -0.16
PCCB-202ENST00000459873 C3P01024 1663 aa14.02□□□□□ -0.16
PCCB-202ENST00000459873 HFM1A2PYH4 1435 aa14.01□□□□□ -0.17
PCCB-202ENST00000459873 CAMSAP1Q5T5Y3 1602 aa14.01□□□□□ -0.17
PCCB-202ENST00000459873 ABCC3O15438 1527 aa14□□□□□ -0.17
PCCB-202ENST00000459873 ANKRD50Q9ULJ7 1429 aa13.99□□□□□ -0.17
PCCB-202ENST00000459873 ARID4BQ4LE39 1312 aaPredicted RBP13.99□□□□□ -0.17
PCCB-202ENST00000459873 IQGAP3Q86VI3 1631 aa13.99□□□□□ -0.17
PCCB-202ENST00000459873 PTPRMP28827 1452 aa13.99□□□□□ -0.17
PCCB-202ENST00000459873 NAIPQ13075 1403 aa13.98□□□□□ -0.17
PCCB-202ENST00000459873 KDM4FA0A1W2PPD8 638 aa13.98□□□□□ -0.17
PCCB-202ENST00000459873 CHIC2Q9UKJ5 165 aa13.98□□□□□ -0.17
PCCB-202ENST00000459873 CNTLNQ9NXG0 1405 aa13.98□□□□□ -0.17
PCCB-202ENST00000459873 LMTK2Q8IWU2 1503 aa13.97□□□□□ -0.17
PCCB-202ENST00000459873 EFCAB6Q5THR3 1501 aa13.96□□□□□ -0.17
PCCB-202ENST00000459873 RRP7BPQ9NSQ0 103 aa13.96□□□□□ -0.17
PCCB-202ENST00000459873 TET3O43151 1660 aa13.95□□□□□ -0.18
PCCB-202ENST00000459873 ITGAEP38570 1179 aa13.94□□□□□ -0.18
PCCB-202ENST00000459873 PREX1Q8TCU6 1659 aa13.93□□□□□ -0.18
PCCB-202ENST00000459873 MYO3AQ8NEV4 1616 aa13.93□□□□□ -0.18
PCCB-202ENST00000459873 ZNF142P52746 1687 aaPredicted RBP13.92□□□□□ -0.18
PCCB-202ENST00000459873 MLECQ14165 292 aa13.92□□□□□ -0.18
PCCB-202ENST00000459873 PZPP20742 1482 aa13.92□□□□□ -0.18
PCCB-202ENST00000459873 KIF3BO15066 747 aa13.91□□□□□ -0.18
PCCB-202ENST00000459873 SPATA31D1Q6ZQQ2 1576 aa13.9□□□□□ -0.18
PCCB-202ENST00000459873 E9PCH4 1651 aa13.89□□□□□ -0.19
PCCB-202ENST00000459873 ARHGAP31Q2M1Z3 1444 aa13.88□□□□□ -0.19
PCCB-202ENST00000459873 GGT6Q6P531 493 aa13.87□□□□□ -0.19
PCCB-202ENST00000459873 PPP6R1Q9UPN7 881 aa13.87□□□□□ -0.19
PCCB-202ENST00000459873 NPATQ14207 1427 aa13.87□□□□□ -0.19
PCCB-202ENST00000459873 ERVK-7P63135 1459 aa13.87□□□□□ -0.19
PCCB-202ENST00000459873 RPRD2Q5VT52 1461 aaKnown RBP13.86□□□□□ -0.19
PCCB-202ENST00000459873 KANK1Q14678 1352 aa13.85□□□□□ -0.19
PCCB-202ENST00000459873 SPHKAPQ2M3C7 1700 aa13.85□□□□□ -0.19
PCCB-202ENST00000459873 SYNMO15061 1565 aa13.85□□□□□ -0.19
PCCB-202ENST00000459873 LMTK3Q96Q04 1460 aa13.84□□□□□ -0.19
PCCB-202ENST00000459873 ZMYM3Q14202 1370 aa13.83□□□□□ -0.19
PCCB-202ENST00000459873 CEP170BQ9Y4F5 1589 aaPredicted RBP13.83□□□□□ -0.19
PCCB-202ENST00000459873 SETD5Q9C0A6 1442 aa13.83□□□□□ -0.2
PCCB-202ENST00000459873 PIK3C2BO00750 1634 aa13.82□□□□□ -0.2
PCCB-202ENST00000459873 WASHC2CQ9Y4E1 1318 aa13.82□□□□□ -0.2
PCCB-202ENST00000459873 RAB3GAP2Q9H2M9 1393 aa13.82□□□□□ -0.2
PCCB-202ENST00000459873 ESF1Q9H501 851 aaKnown RBP13.81□□□□□ -0.2
PCCB-202ENST00000459873 KDM5AP29375 1690 aaKnown RBP13.8□□□□□ -0.2
PCCB-202ENST00000459873 NUP155O75694 1391 aa13.79□□□□□ -0.2
PCCB-202ENST00000459873 NOS1P29475 1434 aa13.79□□□□□ -0.2
PCCB-202ENST00000459873 TRPM2O94759 1503 aa13.79□□□□□ -0.2
PCCB-202ENST00000459873 UBR1Q8IWV7 1749 aa13.78□□□□□ -0.2
PCCB-202ENST00000459873 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.78□□□□□ -0.2
PCCB-202ENST00000459873 UHRF1BP1Q6BDS2 1440 aa13.78□□□□□ -0.2
PCCB-202ENST00000459873 NLRP1Q9C000 1473 aa13.78□□□□□ -0.2
PCCB-202ENST00000459873 SETD1BQ9UPS6 1966 aaKnown RBP13.78□□□□□ -0.2
PCCB-202ENST00000459873 ADGRB3O60242 1522 aa13.77□□□□□ -0.21
PCCB-202ENST00000459873 CEBPAP49715 358 aaPredicted RBP13.77□□□□□ -0.21
PCCB-202ENST00000459873 UGGT1Q9NYU2 1555 aa13.76□□□□□ -0.21
PCCB-202ENST00000459873 A2ML1A8K2U0 1454 aa13.76□□□□□ -0.21
PCCB-202ENST00000459873 TNRQ92752 1358 aa13.76□□□□□ -0.21
PCCB-202ENST00000459873 CFAP65Q6ZU64 1925 aaKnown RBP13.76□□□□□ -0.21
PCCB-202ENST00000459873 CLTCL1P53675 1640 aa13.75□□□□□ -0.21
PCCB-202ENST00000459873 POLR1AO95602 1720 aaPredicted RBP13.75□□□□□ -0.21
PCCB-202ENST00000459873 PTPRTO14522 1441 aa13.73□□□□□ -0.21
PCCB-202ENST00000459873 TRIM26Q12899 539 aaPredicted RBP13.73□□□□□ -0.21
PCCB-202ENST00000459873 MYO5BQ9ULV0 1848 aa13.73□□□□□ -0.21
PCCB-202ENST00000459873 PLPPR3Q6T4P5 718 aa13.72□□□□□ -0.21
PCCB-202ENST00000459873 TMEM131LA2VDJ0 1609 aa13.72□□□□□ -0.21
PCCB-202ENST00000459873 FBXO31Q5XUX0 539 aaPredicted RBP13.71□□□□□ -0.21
PCCB-202ENST00000459873 AEBP2Q6ZN18 517 aaPredicted RBP13.71□□□□□ -0.21
PCCB-202ENST00000459873 PLA2R1Q13018 1463 aa13.7□□□□□ -0.22
PCCB-202ENST00000459873 STRCQ7RTU9 1775 aa13.7□□□□□ -0.22
PCCB-202ENST00000459873 ACIN1Q9UKV3 1341 aaKnown RBP13.69□□□□□ -0.22
PCCB-202ENST00000459873 NEURL4Q96JN8 1562 aa13.69□□□□□ -0.22
PCCB-202ENST00000459873 KIF1BO60333 1816 aa13.68□□□□□ -0.22
PCCB-202ENST00000459873 SLIT1O75093 1534 aa13.68□□□□□ -0.22
PCCB-202ENST00000459873 HRCP23327 699 aa13.66□□□□□ -0.22
PCCB-202ENST00000459873 TRIM52Q96A61 297 aa13.66□□□□□ -0.22
PCCB-202ENST00000459873 ARHGAP23Q9P227 1491 aa13.66□□□□□ -0.22
PCCB-202ENST00000459873 IFT172Q9UG01 1749 aa13.65□□□□□ -0.22
PCCB-202ENST00000459873 SLC4A1APQ9BWU0 796 aaKnown RBP13.64□□□□□ -0.23
PCCB-202ENST00000459873 PKD2Q13563 968 aa13.63□□□□□ -0.23
PCCB-202ENST00000459873 IQGAP1P46940 1657 aa13.63□□□□□ -0.23
PCCB-202ENST00000459873 MPHOSPH9Q99550 1183 aa13.62□□□□□ -0.23
PCCB-202ENST00000459873 PPLO60437 1756 aa13.61□□□□□ -0.23
PCCB-202ENST00000459873 NEXMIFQ5QGS0 1516 aa13.61□□□□□ -0.23
PCCB-202ENST00000459873 ZFYVE9O95405 1425 aa13.61□□□□□ -0.23
PCCB-202ENST00000459873 CCDC144AA2RUR9 1427 aa13.6□□□□□ -0.23
PCCB-202ENST00000459873 SCAF11Q99590 1463 aaKnown RBP13.6□□□□□ -0.23
PCCB-202ENST00000459873 HSPA2P54652 639 aa13.59□□□□□ -0.23
PCCB-202ENST00000459873 SLC52A1Q9NWF4 448 aa13.59□□□□□ -0.23
PCCB-202ENST00000459873 DHX57Q6P158 1386 aaKnown RBP13.58□□□□□ -0.23
PCCB-202ENST00000459873 FOXD1Q16676 465 aa13.58□□□□□ -0.24
PCCB-202ENST00000459873 MED14O60244 1454 aa13.58□□□□□ -0.24
PCCB-202ENST00000459873 ANKRD30BQ9BXX2 1392 aa13.58□□□□□ -0.24
PCCB-202ENST00000459873 NRXN3Q9Y4C0 1643 aa13.57□□□□□ -0.24
PCCB-202ENST00000459873 SPATA31E1Q6ZUB1 1445 aa13.57□□□□□ -0.24
PCCB-202ENST00000459873 IDI1Q13907 227 aa13.57□□□□□ -0.24
PCCB-202ENST00000459873 TMEM2Q9UHN6 1383 aa13.57□□□□□ -0.24
PCCB-202ENST00000459873 SETD1AO15047 1707 aaKnown RBP13.56□□□□□ -0.24
PCCB-202ENST00000459873 DIP2AQ14689 1571 aa13.54□□□□□ -0.24
PCCB-202ENST00000459873 SETBP1Q9Y6X0 1596 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms