RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 GGT6Q6P531 493 aa15.67■□□□□ 0.1
HDLBP-228ENST00000459788 ILDR1Q86SU0 546 aaPredicted RBP15.67■□□□□ 0.1
HDLBP-228ENST00000459788 MYO3AQ8NEV4 1616 aa15.67■□□□□ 0.1
HDLBP-228ENST00000459788 PTPRTO14522 1441 aa15.67■□□□□ 0.1
HDLBP-228ENST00000459788 TCOF1Q13428 1488 aaKnown RBP15.66■□□□□ 0.1
HDLBP-228ENST00000459788 DNMT1P26358 1616 aaKnown RBP15.65■□□□□ 0.1
HDLBP-228ENST00000459788 DUOX2Q9NRD8 1548 aa15.64■□□□□ 0.09
HDLBP-228ENST00000459788 KIF3BO15066 747 aa15.64■□□□□ 0.09
HDLBP-228ENST00000459788 FGD6Q6ZV73 1430 aa15.64■□□□□ 0.09
HDLBP-228ENST00000459788 PZPP20742 1482 aa15.64■□□□□ 0.09
HDLBP-228ENST00000459788 CEP170BQ9Y4F5 1589 aaPredicted RBP15.63■□□□□ 0.09
HDLBP-228ENST00000459788 NCOA1Q15788 1441 aa15.63■□□□□ 0.09
HDLBP-228ENST00000459788 FBXO41Q8TF61 875 aa15.63■□□□□ 0.09
HDLBP-228ENST00000459788 PLA2R1Q13018 1463 aa15.63■□□□□ 0.09
HDLBP-228ENST00000459788 CAMSAP1Q5T5Y3 1602 aa15.61■□□□□ 0.09
HDLBP-228ENST00000459788 WASHC2CQ9Y4E1 1318 aa15.6■□□□□ 0.09
HDLBP-228ENST00000459788 ABCC5O15440 1437 aa15.6■□□□□ 0.09
HDLBP-228ENST00000459788 ERBINQ96RT1 1412 aa15.6■□□□□ 0.09
HDLBP-228ENST00000459788 A2ML1A8K2U0 1454 aa15.59■□□□□ 0.09
HDLBP-228ENST00000459788 DAPK1P53355 1430 aa15.59■□□□□ 0.09
HDLBP-228ENST00000459788 MROH1Q8NDA8 1641 aa15.58■□□□□ 0.09
HDLBP-228ENST00000459788 ABCC3O15438 1527 aa15.58■□□□□ 0.08
HDLBP-228ENST00000459788 DEPDC5O75140 1603 aa15.57■□□□□ 0.08
HDLBP-228ENST00000459788 PKD2Q13563 968 aa15.57■□□□□ 0.08
HDLBP-228ENST00000459788 NLRP1Q9C000 1473 aa15.57■□□□□ 0.08
HDLBP-228ENST00000459788 PRDM15P57071 1507 aaPredicted RBP15.57■□□□□ 0.08
HDLBP-228ENST00000459788 KIF15Q9NS87 1388 aa15.56■□□□□ 0.08
HDLBP-228ENST00000459788 POLR1AO95602 1720 aaPredicted RBP15.55■□□□□ 0.08
HDLBP-228ENST00000459788 TNRQ92752 1358 aa15.55■□□□□ 0.08
HDLBP-228ENST00000459788 CEP152O94986 1710 aa15.54■□□□□ 0.08
HDLBP-228ENST00000459788 SPATA31D1Q6ZQQ2 1576 aa15.54■□□□□ 0.08
HDLBP-228ENST00000459788 ADGRL2O95490 1459 aa15.54■□□□□ 0.08
HDLBP-228ENST00000459788 IQSEC2Q5JU85 1478 aa15.54■□□□□ 0.08
HDLBP-228ENST00000459788 ANKRD30AQ9BXX3 1397 aa15.54■□□□□ 0.08
HDLBP-228ENST00000459788 CERKQ8TCT0 537 aa15.54■□□□□ 0.08
HDLBP-228ENST00000459788 ARHGAP31Q2M1Z3 1444 aa15.53■□□□□ 0.08
HDLBP-228ENST00000459788 CFAP65Q6ZU64 1925 aaKnown RBP15.51■□□□□ 0.07
HDLBP-228ENST00000459788 LTBP4Q8N2S1 1624 aa15.5■□□□□ 0.07
HDLBP-228ENST00000459788 LMTK2Q8IWU2 1503 aa15.49■□□□□ 0.07
HDLBP-228ENST00000459788 ERVK-7P63135 1459 aa15.49■□□□□ 0.07
HDLBP-228ENST00000459788 VWDEQ8N2E2 1590 aa15.49■□□□□ 0.07
HDLBP-228ENST00000459788 UGGT1Q9NYU2 1555 aa15.49■□□□□ 0.07
HDLBP-228ENST00000459788 KANK1Q14678 1352 aa15.49■□□□□ 0.07
HDLBP-228ENST00000459788 FBXO31Q5XUX0 539 aaPredicted RBP15.48■□□□□ 0.07
HDLBP-228ENST00000459788 THEMISQ8N1K5 641 aaPredicted RBP15.48■□□□□ 0.07
HDLBP-228ENST00000459788 KDM5AP29375 1690 aaKnown RBP15.48■□□□□ 0.07
HDLBP-228ENST00000459788 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.47■□□□□ 0.07
HDLBP-228ENST00000459788 RRP7BPQ9NSQ0 103 aa15.46■□□□□ 0.07
HDLBP-228ENST00000459788 MED14O60244 1454 aa15.46■□□□□ 0.06
HDLBP-228ENST00000459788 UBR1Q8IWV7 1749 aa15.45■□□□□ 0.06
HDLBP-228ENST00000459788 NEURL4Q96JN8 1562 aa15.45■□□□□ 0.06
HDLBP-228ENST00000459788 NCKAP5LQ9HCH0 1330 aa15.44■□□□□ 0.06
HDLBP-228ENST00000459788 ANKLE2Q86XL3 938 aa15.43■□□□□ 0.06
HDLBP-228ENST00000459788 ROCK1Q13464 1354 aa15.43■□□□□ 0.06
HDLBP-228ENST00000459788 RPRD2Q5VT52 1461 aaKnown RBP15.41■□□□□ 0.06
HDLBP-228ENST00000459788 FAM50AQ14320 339 aaKnown RBP15.41■□□□□ 0.06
HDLBP-228ENST00000459788 EFCAB6Q5THR3 1501 aa15.41■□□□□ 0.06
HDLBP-228ENST00000459788 ANKRD50Q9ULJ7 1429 aa15.41■□□□□ 0.06
HDLBP-228ENST00000459788 CHIC2Q9UKJ5 165 aa15.4■□□□□ 0.06
HDLBP-228ENST00000459788 IQGAP1P46940 1657 aa15.4■□□□□ 0.06
HDLBP-228ENST00000459788 UNC13BO14795 1591 aa15.4■□□□□ 0.06
HDLBP-228ENST00000459788 SLIT1O75093 1534 aa15.39■□□□□ 0.05
HDLBP-228ENST00000459788 CPS1P31327 1500 aa15.39■□□□□ 0.05
HDLBP-228ENST00000459788 TET3O43151 1660 aa15.39■□□□□ 0.05
HDLBP-228ENST00000459788 GCC2Q8IWJ2 1684 aa15.39■□□□□ 0.05
HDLBP-228ENST00000459788 ARHGAP23Q9P227 1491 aa15.37■□□□□ 0.05
HDLBP-228ENST00000459788 NPHP4O75161 1426 aaPredicted RBP15.36■□□□□ 0.05
HDLBP-228ENST00000459788 NOS1P29475 1434 aa15.36■□□□□ 0.05
HDLBP-228ENST00000459788 PIK3C2BO00750 1634 aa15.35■□□□□ 0.05
HDLBP-228ENST00000459788 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.35■□□□□ 0.056e-11■■■□□ 14.8
HDLBP-228ENST00000459788 ZNF335Q9H4Z2 1342 aaPredicted RBP15.35■□□□□ 0.05
HDLBP-228ENST00000459788 SCAF11Q99590 1463 aaKnown RBP15.33■□□□□ 0.05
HDLBP-228ENST00000459788 SYNMO15061 1565 aa15.33■□□□□ 0.05
HDLBP-228ENST00000459788 IQGAP3Q86VI3 1631 aa15.33■□□□□ 0.04
HDLBP-228ENST00000459788 SLC52A1Q9NWF4 448 aa15.33■□□□□ 0.04
HDLBP-228ENST00000459788 RRBP1Q9P2E9 1410 aaKnown RBP15.32■□□□□ 0.04
HDLBP-228ENST00000459788 ADGRB3O60242 1522 aa15.3■□□□□ 0.04
HDLBP-228ENST00000459788 TMEM2Q9UHN6 1383 aa15.29■□□□□ 0.04
HDLBP-228ENST00000459788 EID1Q9Y6B2 187 aa15.29■□□□□ 0.04
HDLBP-228ENST00000459788 E9PCH4 1651 aa15.28■□□□□ 0.04
HDLBP-228ENST00000459788 IDI1Q13907 227 aa15.27■□□□□ 0.04
HDLBP-228ENST00000459788 STRCP1A6NGW2 1772 aa15.26■□□□□ 0.03
HDLBP-228ENST00000459788 TXNDC2Q86VQ3 553 aa15.26■□□□□ 0.03
HDLBP-228ENST00000459788 STAG3Q9UJ98 1225 aa15.26■□□□□ 0.03
HDLBP-228ENST00000459788 MYO5BQ9ULV0 1848 aa15.26■□□□□ 0.03
HDLBP-228ENST00000459788 LTKP29376 864 aa15.24■□□□□ 0.03
HDLBP-228ENST00000459788 TMEM131LA2VDJ0 1609 aa15.24■□□□□ 0.03
HDLBP-228ENST00000459788 HDGFP51858 240 aaKnown RBP15.23■□□□□ 0.03
HDLBP-228ENST00000459788 UBAP1LF5GYI3 381 aa15.22■□□□□ 0.03
HDLBP-228ENST00000459788 TOM1O60784 492 aa15.22■□□□□ 0.03
HDLBP-228ENST00000459788 NUP155O75694 1391 aa15.22■□□□□ 0.03
HDLBP-228ENST00000459788 SPHKAPQ2M3C7 1700 aa15.21■□□□□ 0.03
HDLBP-228ENST00000459788 LRRC7Q96NW7 1537 aa15.21■□□□□ 0.03
HDLBP-228ENST00000459788 ZFYVE9O95405 1425 aa15.19■□□□□ 0.02
HDLBP-228ENST00000459788 XIRP1Q702N8 1843 aaKnown RBP15.19■□□□□ 0.02
HDLBP-228ENST00000459788 NAIPQ13075 1403 aa15.17■□□□□ 0.02
HDLBP-228ENST00000459788 CHD2O14647 1828 aaKnown RBP15.17■□□□□ 0.02
HDLBP-228ENST00000459788 NWD1Q149M9 1564 aa15.17■□□□□ 0.02
HDLBP-228ENST00000459788 PLEKHG1Q9ULL1 1385 aa15.17■□□□□ 0.02
HDLBP-228ENST00000459788 ITGAEP38570 1179 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms