RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 CHIC2Q9UKJ5 165 aa31.91■■■□□ 2.7
VARS-218ENST00000459667 FAM135AQ9P2D6 1515 aa31.9■■■□□ 2.7
VARS-218ENST00000459667 RRP7BPQ9NSQ0 103 aa31.9■■■□□ 2.7
VARS-218ENST00000459667 ANKRD30AQ9BXX3 1397 aa31.9■■■□□ 2.7
VARS-218ENST00000459667 KDM5DQ9BY66 1539 aa31.89■■■□□ 2.7
VARS-218ENST00000459667 SETD1BQ9UPS6 1966 aaKnown RBP31.87■■■□□ 2.69
VARS-218ENST00000459667 ERBINQ96RT1 1412 aa31.86■■■□□ 2.69
VARS-218ENST00000459667 ADGRL2O95490 1459 aa31.85■■■□□ 2.69
VARS-218ENST00000459667 NCOA1Q15788 1441 aa31.84■■■□□ 2.69
VARS-218ENST00000459667 UHRF1BP1Q6BDS2 1440 aa31.84■■■□□ 2.69
VARS-218ENST00000459667 NPATQ14207 1427 aa31.83■■■□□ 2.69
VARS-218ENST00000459667 WASHC2CQ9Y4E1 1318 aa31.82■■■□□ 2.68
VARS-218ENST00000459667 MROH1Q8NDA8 1641 aa31.82■■■□□ 2.68
VARS-218ENST00000459667 HSPA2P54652 639 aa31.8■■■□□ 2.68
VARS-218ENST00000459667 PTPRKQ15262 1439 aa31.79■■■□□ 2.68
VARS-218ENST00000459667 ZC3H13Q5T200 1668 aaKnown RBP31.79■■■□□ 2.68
VARS-218ENST00000459667 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.79■■■□□ 2.68
VARS-218ENST00000459667 ABCC3O15438 1527 aa31.75■■■□□ 2.67
VARS-218ENST00000459667 PRDM15P57071 1507 aaPredicted RBP31.75■■■□□ 2.67
VARS-218ENST00000459667 RRBP1Q9P2E9 1410 aaKnown RBP31.74■■■□□ 2.67
VARS-218ENST00000459667 PZPP20742 1482 aa31.73■■■□□ 2.67
VARS-218ENST00000459667 DEPDC5O75140 1603 aa31.73■■■□□ 2.67
VARS-218ENST00000459667 CEP152O94986 1710 aa31.72■■■□□ 2.67
VARS-218ENST00000459667 MYO3AQ8NEV4 1616 aa31.71■■■□□ 2.67
VARS-218ENST00000459667 ITGAEP38570 1179 aa31.69■■■□□ 2.66
VARS-218ENST00000459667 ROCK1Q13464 1354 aa31.68■■■□□ 2.66
VARS-218ENST00000459667 ANKRD50Q9ULJ7 1429 aa31.67■■■□□ 2.66
VARS-218ENST00000459667 CAMSAP1Q5T5Y3 1602 aa31.67■■■□□ 2.66
VARS-218ENST00000459667 ZNF142P52746 1687 aaPredicted RBP31.65■■■□□ 2.66
VARS-218ENST00000459667 FBXO31Q5XUX0 539 aaPredicted RBP31.65■■■□□ 2.66
VARS-218ENST00000459667 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.65■■■□□ 2.666e-6■□□□□ 11
VARS-218ENST00000459667 KANK1Q14678 1352 aa31.64■■■□□ 2.66
VARS-218ENST00000459667 TNRQ92752 1358 aa31.62■■■□□ 2.65
VARS-218ENST00000459667 CEP170BQ9Y4F5 1589 aaPredicted RBP31.62■■■□□ 2.65
VARS-218ENST00000459667 VWDEQ8N2E2 1590 aa31.59■■■□□ 2.65
VARS-218ENST00000459667 STRCQ7RTU9 1775 aa31.56■■■□□ 2.64
VARS-218ENST00000459667 SPATA31D1Q6ZQQ2 1576 aa31.56■■■□□ 2.64
VARS-218ENST00000459667 LMTK2Q8IWU2 1503 aa31.55■■■□□ 2.64
VARS-218ENST00000459667 A2ML1A8K2U0 1454 aa31.55■■■□□ 2.64
VARS-218ENST00000459667 ERVK-7P63135 1459 aa31.54■■■□□ 2.64
VARS-218ENST00000459667 ARHGAP31Q2M1Z3 1444 aa31.54■■■□□ 2.64
VARS-218ENST00000459667 UNC13BO14795 1591 aa31.51■■■□□ 2.64
VARS-218ENST00000459667 CFAP65Q6ZU64 1925 aaKnown RBP31.51■■■□□ 2.63
VARS-218ENST00000459667 NLRP1Q9C000 1473 aa31.5■■■□□ 2.63
VARS-218ENST00000459667 EFCAB6Q5THR3 1501 aa31.47■■■□□ 2.63
VARS-218ENST00000459667 PLA2R1Q13018 1463 aa31.46■■■□□ 2.63
VARS-218ENST00000459667 DMRT2Q9Y5R5 561 aa31.43■■■□□ 2.62
VARS-218ENST00000459667 UGGT1Q9NYU2 1555 aa31.42■■■□□ 2.62
VARS-218ENST00000459667 TET3O43151 1660 aa31.41■■■□□ 2.62
VARS-218ENST00000459667 GCC2Q8IWJ2 1684 aa31.41■■■□□ 2.62
VARS-218ENST00000459667 IQGAP3Q86VI3 1631 aa31.38■■■□□ 2.61
VARS-218ENST00000459667 PTPRTO14522 1441 aa31.38■■■□□ 2.61
VARS-218ENST00000459667 NAIPQ13075 1403 aa31.38■■■□□ 2.61
VARS-218ENST00000459667 NCKAP5LQ9HCH0 1330 aa31.36■■■□□ 2.61
VARS-218ENST00000459667 RPRD2Q5VT52 1461 aaKnown RBP31.35■■■□□ 2.61
VARS-218ENST00000459667 NUP155O75694 1391 aa31.34■■■□□ 2.61
VARS-218ENST00000459667 PKD2Q13563 968 aa31.34■■■□□ 2.61
VARS-218ENST00000459667 HFM1A2PYH4 1435 aa31.33■■■□□ 2.61
VARS-218ENST00000459667 THEMISQ8N1K5 641 aaPredicted RBP31.33■■■□□ 2.61
VARS-218ENST00000459667 SYNMO15061 1565 aa31.32■■■□□ 2.6
VARS-218ENST00000459667 NOS1P29475 1434 aa31.32■■■□□ 2.6
VARS-218ENST00000459667 POLR1AO95602 1720 aaPredicted RBP31.31■■■□□ 2.6
VARS-218ENST00000459667 UBR1Q8IWV7 1749 aa31.31■■■□□ 2.6
VARS-218ENST00000459667 E9PCH4 1651 aa31.29■■■□□ 2.6
VARS-218ENST00000459667 PIK3C2BO00750 1634 aa31.28■■■□□ 2.6
VARS-218ENST00000459667 NEURL4Q96JN8 1562 aa31.24■■■□□ 2.59
VARS-218ENST00000459667 ANKLE2Q86XL3 938 aa31.23■■■□□ 2.59
VARS-218ENST00000459667 IDI1Q13907 227 aa31.21■■■□□ 2.59
VARS-218ENST00000459667 KDM5AP29375 1690 aaKnown RBP31.2■■■□□ 2.59
VARS-218ENST00000459667 SLC52A1Q9NWF4 448 aa31.19■■■□□ 2.58
VARS-218ENST00000459667 STAG3Q9UJ98 1225 aa31.19■■■□□ 2.58
VARS-218ENST00000459667 ADGRB3O60242 1522 aa31.17■■■□□ 2.58
VARS-218ENST00000459667 SLIT1O75093 1534 aa31.16■■■□□ 2.58
VARS-218ENST00000459667 ARHGAP23Q9P227 1491 aa31.15■■■□□ 2.58
VARS-218ENST00000459667 MED14O60244 1454 aa31.14■■■□□ 2.58
VARS-218ENST00000459667 NPHP4O75161 1426 aaPredicted RBP31.14■■■□□ 2.58
VARS-218ENST00000459667 TRIM52Q96A61 297 aa31.13■■■□□ 2.57
VARS-218ENST00000459667 SCAF11Q99590 1463 aaKnown RBP31.12■■■□□ 2.57
VARS-218ENST00000459667 IQGAP1P46940 1657 aa31.12■■■□□ 2.57
VARS-218ENST00000459667 CERKQ8TCT0 537 aa31.11■■■□□ 2.57
VARS-218ENST00000459667 LTBP4Q8N2S1 1624 aa31.1■■■□□ 2.57
VARS-218ENST00000459667 TMEM2Q9UHN6 1383 aa31.1■■■□□ 2.57
VARS-218ENST00000459667 SPHKAPQ2M3C7 1700 aa31.09■■■□□ 2.57
VARS-218ENST00000459667 ZNF335Q9H4Z2 1342 aaPredicted RBP31.08■■■□□ 2.57
VARS-218ENST00000459667 TXNDC2Q86VQ3 553 aa31.06■■■□□ 2.56
VARS-218ENST00000459667 EID1Q9Y6B2 187 aa31.06■■■□□ 2.56
VARS-218ENST00000459667 MYO5BQ9ULV0 1848 aa31.05■■■□□ 2.56
VARS-218ENST00000459667 LTKP29376 864 aa31.05■■■□□ 2.56
VARS-218ENST00000459667 TMEM131LA2VDJ0 1609 aa31.05■■■□□ 2.56
VARS-218ENST00000459667 ILDR1Q86SU0 546 aaPredicted RBP31.03■■■□□ 2.56
VARS-218ENST00000459667 SETD5Q9C0A6 1442 aa31.01■■■□□ 2.55
VARS-218ENST00000459667 CHGAP10645 457 aaKnown RBP31■■■□□ 2.55
VARS-218ENST00000459667 FBXO41Q8TF61 875 aa31■■■□□ 2.55
VARS-218ENST00000459667 SLC4A1APQ9BWU0 796 aaKnown RBP31■■■□□ 2.55
VARS-218ENST00000459667 TRPM2O94759 1503 aa30.98■■■□□ 2.55
VARS-218ENST00000459667 ZFYVE9O95405 1425 aa30.94■■■□□ 2.54
VARS-218ENST00000459667 RIMS2Q9UQ26 1411 aa30.94■■■□□ 2.54
VARS-218ENST00000459667 CLTCL1P53675 1640 aa30.93■■■□□ 2.54
VARS-218ENST00000459667 IQSEC2Q5JU85 1478 aa30.92■■■□□ 2.54
VARS-218ENST00000459667 CPS1P31327 1500 aa30.91■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms