RNA–Protein interactions for RNA: ENST00000458729.5

SEMA3C-205, Transcript of semaphorin 3C, humanhuman

TSL 2

Gene SEMA3C, Length 1,318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-205ENST00000458729 RIMS1Q86UR5 1692 aaKnown RBP39.2■■■■□ 3.87
SEMA3C-205ENST00000458729 CNTLNQ9NXG0 1405 aa39.17■■■■□ 3.86
SEMA3C-205ENST00000458729 ANKRD50Q9ULJ7 1429 aa39.11■■■■□ 3.85
SEMA3C-205ENST00000458729 RNF17Q9BXT8 1623 aaKnown RBP39.1■■■■□ 3.85
SEMA3C-205ENST00000458729 FAM135AQ9P2D6 1515 aa39.07■■■■□ 3.84
SEMA3C-205ENST00000458729 WASHC2CQ9Y4E1 1318 aa39.04■■■■□ 3.84
SEMA3C-205ENST00000458729 MROH2AA6NES4 1674 aa39■■■■□ 3.83
SEMA3C-205ENST00000458729 CLTCQ00610 1675 aaKnown RBP39■■■■□ 3.83
SEMA3C-205ENST00000458729 KDM5DQ9BY66 1539 aa39■■■■□ 3.83
SEMA3C-205ENST00000458729 ZMYM3Q14202 1370 aa39■■■■□ 3.83
SEMA3C-205ENST00000458729 PLPPR3Q6T4P5 718 aa39■■■■□ 3.83
SEMA3C-205ENST00000458729 CEBPAP49715 358 aaPredicted RBP38.98■■■■□ 3.83
SEMA3C-205ENST00000458729 MROH1Q8NDA8 1641 aa38.97■■■■□ 3.83
SEMA3C-205ENST00000458729 DEPDC5O75140 1603 aa38.96■■■■□ 3.83
SEMA3C-205ENST00000458729 PRDM15P57071 1507 aaPredicted RBP38.95■■■■□ 3.83
SEMA3C-205ENST00000458729 KANK1Q14678 1352 aa38.95■■■■□ 3.83
SEMA3C-205ENST00000458729 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.94■■■■□ 3.82
SEMA3C-205ENST00000458729 C3P01024 1663 aa38.93■■■■□ 3.82
SEMA3C-205ENST00000458729 ZC3H13Q5T200 1668 aaKnown RBP38.91■■■■□ 3.82
SEMA3C-205ENST00000458729 NAIPQ13075 1403 aa38.91■■■■□ 3.82
SEMA3C-205ENST00000458729 HFM1A2PYH4 1435 aa38.9■■■■□ 3.82
SEMA3C-205ENST00000458729 ABCC3O15438 1527 aa38.9■■■■□ 3.82
SEMA3C-205ENST00000458729 GCC2Q8IWJ2 1684 aa38.84■■■■□ 3.81
SEMA3C-205ENST00000458729 VWDEQ8N2E2 1590 aa38.82■■■■□ 3.81
SEMA3C-205ENST00000458729 NPATQ14207 1427 aa38.82■■■■□ 3.81
SEMA3C-205ENST00000458729 UNC13BO14795 1591 aa38.8■■■■□ 3.8
SEMA3C-205ENST00000458729 CEP152O94986 1710 aa38.8■■■■□ 3.8
SEMA3C-205ENST00000458729 PZPP20742 1482 aa38.79■■■■□ 3.8
SEMA3C-205ENST00000458729 SETD1BQ9UPS6 1966 aaKnown RBP38.79■■■■□ 3.8
SEMA3C-205ENST00000458729 LMTK2Q8IWU2 1503 aa38.79■■■■□ 3.8
SEMA3C-205ENST00000458729 CAMSAP1Q5T5Y3 1602 aa38.75■■■■□ 3.79
SEMA3C-205ENST00000458729 ARHGAP31Q2M1Z3 1444 aa38.74■■■■□ 3.79
SEMA3C-205ENST00000458729 NUP155O75694 1391 aa38.73■■■■□ 3.79
SEMA3C-205ENST00000458729 FBXO31Q5XUX0 539 aaPredicted RBP38.7■■■■□ 3.79
SEMA3C-205ENST00000458729 PREX1Q8TCU6 1659 aa38.67■■■■□ 3.78
SEMA3C-205ENST00000458729 UHRF1BP1Q6BDS2 1440 aa38.67■■■■□ 3.78
SEMA3C-205ENST00000458729 IQGAP3Q86VI3 1631 aa38.65■■■■□ 3.78
SEMA3C-205ENST00000458729 SETD5Q9C0A6 1442 aa38.64■■■■□ 3.78
SEMA3C-205ENST00000458729 TNRQ92752 1358 aa38.64■■■■□ 3.78
SEMA3C-205ENST00000458729 LMTK3Q96Q04 1460 aa38.63■■■■□ 3.77
SEMA3C-205ENST00000458729 EFCAB6Q5THR3 1501 aa38.62■■■■□ 3.77
SEMA3C-205ENST00000458729 TET3O43151 1660 aa38.62■■■■□ 3.77
SEMA3C-205ENST00000458729 ACIN1Q9UKV3 1341 aaKnown RBP38.61■■■■□ 3.77
SEMA3C-205ENST00000458729 ERVK-7P63135 1459 aa38.6■■■■□ 3.77
SEMA3C-205ENST00000458729 TRIM52Q96A61 297 aa38.6■■■■□ 3.77
SEMA3C-205ENST00000458729 SPATA31D1Q6ZQQ2 1576 aa38.59■■■■□ 3.77
SEMA3C-205ENST00000458729 RPRD2Q5VT52 1461 aaKnown RBP38.57■■■■□ 3.76
SEMA3C-205ENST00000458729 CFAP65Q6ZU64 1925 aaKnown RBP38.54■■■■□ 3.76
SEMA3C-205ENST00000458729 MYO3AQ8NEV4 1616 aa38.53■■■■□ 3.76
SEMA3C-205ENST00000458729 NLRP1Q9C000 1473 aa38.5■■■■□ 3.75
SEMA3C-205ENST00000458729 RAB3GAP2Q9H2M9 1393 aa38.48■■■■□ 3.75
SEMA3C-205ENST00000458729 TRIM26Q12899 539 aaPredicted RBP38.47■■■■□ 3.75
SEMA3C-205ENST00000458729 A2ML1A8K2U0 1454 aa38.47■■■■□ 3.75
SEMA3C-205ENST00000458729 HSPA2P54652 639 aa38.46■■■■□ 3.75
SEMA3C-205ENST00000458729 NOS1P29475 1434 aa38.46■■■■□ 3.75
SEMA3C-205ENST00000458729 CEP170BQ9Y4F5 1589 aaPredicted RBP38.45■■■■□ 3.75
SEMA3C-205ENST00000458729 E9PCH4 1651 aa38.45■■■■□ 3.75
SEMA3C-205ENST00000458729 ZNF142P52746 1687 aaPredicted RBP38.45■■■■□ 3.75
SEMA3C-205ENST00000458729 HRCP23327 699 aa38.44■■■■□ 3.74
SEMA3C-205ENST00000458729 SLC4A1APQ9BWU0 796 aaKnown RBP38.42■■■■□ 3.74
SEMA3C-205ENST00000458729 SLC52A1Q9NWF4 448 aa38.38■■■■□ 3.73
SEMA3C-205ENST00000458729 SYNMO15061 1565 aa38.36■■■■□ 3.73
SEMA3C-205ENST00000458729 PKD2Q13563 968 aa38.36■■■■□ 3.73
SEMA3C-205ENST00000458729 THEMISQ8N1K5 641 aaPredicted RBP38.34■■■■□ 3.73
SEMA3C-205ENST00000458729 IDI1Q13907 227 aa38.33■■■■□ 3.73
SEMA3C-205ENST00000458729 MPHOSPH9Q99550 1183 aa38.33■■■■□ 3.73
SEMA3C-205ENST00000458729 UGGT1Q9NYU2 1555 aa38.33■■■■□ 3.73
SEMA3C-205ENST00000458729 PTPRTO14522 1441 aa38.29■■■■□ 3.72
SEMA3C-205ENST00000458729 STAG3Q9UJ98 1225 aa38.26■■■■□ 3.72
SEMA3C-205ENST00000458729 PLA2R1Q13018 1463 aa38.25■■■■□ 3.71
SEMA3C-205ENST00000458729 PIK3C2BO00750 1634 aa38.23■■■■□ 3.71
SEMA3C-205ENST00000458729 SPHKAPQ2M3C7 1700 aa38.23■■■■□ 3.71
SEMA3C-205ENST00000458729 UBR1Q8IWV7 1749 aa38.21■■■■□ 3.71
SEMA3C-205ENST00000458729 KDM5AP29375 1690 aaKnown RBP38.19■■■■□ 3.7
SEMA3C-205ENST00000458729 DMRT2Q9Y5R5 561 aa38.16■■■■□ 3.7
SEMA3C-205ENST00000458729 TRPM2O94759 1503 aa38.16■■■■□ 3.7
SEMA3C-205ENST00000458729 STRCQ7RTU9 1775 aa38.15■■■■□ 3.7
SEMA3C-205ENST00000458729 FOXD1Q16676 465 aa38.15■■■■□ 3.7
SEMA3C-205ENST00000458729 ADGRB3O60242 1522 aa38.15■■■■□ 3.7
SEMA3C-205ENST00000458729 ANKLE2Q86XL3 938 aa38.14■■■■□ 3.7
SEMA3C-205ENST00000458729 NCKAP5LQ9HCH0 1330 aa38.12■■■■□ 3.69
SEMA3C-205ENST00000458729 CHGAP10645 457 aaKnown RBP38.1■■■■□ 3.69
SEMA3C-205ENST00000458729 TMEM2Q9UHN6 1383 aa38.08■■■■□ 3.69
SEMA3C-205ENST00000458729 SLIT1O75093 1534 aa38.08■■■■□ 3.69
SEMA3C-205ENST00000458729 ARHGAP23Q9P227 1491 aa38.07■■■■□ 3.69
SEMA3C-205ENST00000458729 TMEM131LA2VDJ0 1609 aa38.07■■■■□ 3.68
SEMA3C-205ENST00000458729 EID1Q9Y6B2 187 aa38.05■■■■□ 3.68
SEMA3C-205ENST00000458729 CLTCL1P53675 1640 aa38.04■■■■□ 3.68
SEMA3C-205ENST00000458729 TXNDC2Q86VQ3 553 aa38.02■■■■□ 3.68
SEMA3C-205ENST00000458729 POLR1AO95602 1720 aaPredicted RBP38.01■■■■□ 3.68
SEMA3C-205ENST00000458729 HDGFP51858 240 aaKnown RBP38■■■■□ 3.67
SEMA3C-205ENST00000458729 CCDC144AA2RUR9 1427 aa37.99■■■■□ 3.67
SEMA3C-205ENST00000458729 SCAF11Q99590 1463 aaKnown RBP37.98■■■■□ 3.67
SEMA3C-205ENST00000458729 LTKP29376 864 aa37.97■■■■□ 3.67
SEMA3C-205ENST00000458729 MYO5BQ9ULV0 1848 aa37.97■■■■□ 3.67
SEMA3C-205ENST00000458729 MED14O60244 1454 aa37.96■■■■□ 3.67
SEMA3C-205ENST00000458729 NEURL4Q96JN8 1562 aa37.95■■■■□ 3.67
SEMA3C-205ENST00000458729 KIF1BO60333 1816 aa37.94■■■■□ 3.66
SEMA3C-205ENST00000458729 NPHP4O75161 1426 aaPredicted RBP37.93■■■■□ 3.66
SEMA3C-205ENST00000458729 RIMS2Q9UQ26 1411 aa37.93■■■■□ 3.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms