RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 SOCS7O14512 581 aa23.23■■□□□ 1.31
UPF3AP2-201ENST00000457924 MTUS2Q5JR59 1369 aa23.23■■□□□ 1.31
UPF3AP2-201ENST00000457924 ADGBQ8N7X0 1667 aa23.22■■□□□ 1.31
UPF3AP2-201ENST00000457924 ZBTB22O15209 634 aa23.21■■□□□ 1.31
UPF3AP2-201ENST00000457924 PKD2Q13563 968 aa23.21■■□□□ 1.31
UPF3AP2-201ENST00000457924 PTPRKQ15262 1439 aa23.21■■□□□ 1.31
UPF3AP2-201ENST00000457924 CEP170BQ9Y4F5 1589 aaPredicted RBP23.2■■□□□ 1.3
UPF3AP2-201ENST00000457924 PLA2R1Q13018 1463 aa23.2■■□□□ 1.3
UPF3AP2-201ENST00000457924 ZNF335Q9H4Z2 1342 aaPredicted RBP23.19■■□□□ 1.3
UPF3AP2-201ENST00000457924 FOXD4L1Q9NU39 408 aa23.16■■□□□ 1.3
UPF3AP2-201ENST00000457924 TCOF1Q13428 1488 aaKnown RBP23.15■■□□□ 1.3
UPF3AP2-201ENST00000457924 TIAM1Q13009 1591 aa23.14■■□□□ 1.3
UPF3AP2-201ENST00000457924 ZNF644Q9H582 1327 aaPredicted RBP23.14■■□□□ 1.3
UPF3AP2-201ENST00000457924 UBAP1LF5GYI3 381 aa23.14■■□□□ 1.29
UPF3AP2-201ENST00000457924 EHBP1L1Q8N3D4 1523 aa23.12■■□□□ 1.29
UPF3AP2-201ENST00000457924 MBD5Q9P267 1494 aa23.11■■□□□ 1.29
UPF3AP2-201ENST00000457924 RTEL1-TNFRSF6BF6WH68 1400 aa23.11■■□□□ 1.29
UPF3AP2-201ENST00000457924 A2ML1A8K2U0 1454 aa23.1■■□□□ 1.29
UPF3AP2-201ENST00000457924 DHX29Q7Z478 1369 aaKnown RBP23.08■■□□□ 1.29
UPF3AP2-201ENST00000457924 DNMT1P26358 1616 aaKnown RBP23.08■■□□□ 1.28
UPF3AP2-201ENST00000457924 CEP162Q5TB80 1403 aa23.07■■□□□ 1.28
UPF3AP2-201ENST00000457924 KIF3BO15066 747 aa23.04■■□□□ 1.28
UPF3AP2-201ENST00000457924 TNRQ92752 1358 aa23.02■■□□□ 1.28
UPF3AP2-201ENST00000457924 POLR1AO95602 1720 aaPredicted RBP23.02■■□□□ 1.28
UPF3AP2-201ENST00000457924 RNF39Q9H2S5 420 aa23.02■■□□□ 1.28
UPF3AP2-201ENST00000457924 CCDC141Q6ZP82 1450 aa23.02■■□□□ 1.28
UPF3AP2-201ENST00000457924 RSPH4AQ5TD94 716 aa23.01■■□□□ 1.27
UPF3AP2-201ENST00000457924 KDM5DQ9BY66 1539 aa23.01■■□□□ 1.27
UPF3AP2-201ENST00000457924 FAM135AQ9P2D6 1515 aa23.01■■□□□ 1.27
UPF3AP2-201ENST00000457924 FBXO31Q5XUX0 539 aaPredicted RBP23■■□□□ 1.27
UPF3AP2-201ENST00000457924 U3KPZ7 1027 aaPredicted RBP23■■□□□ 1.27
UPF3AP2-201ENST00000457924 PZPP20742 1482 aa22.99■■□□□ 1.27
UPF3AP2-201ENST00000457924 WASHC2CQ9Y4E1 1318 aa22.99■■□□□ 1.27
UPF3AP2-201ENST00000457924 CAMSAP2Q08AD1 1489 aa22.98■■□□□ 1.27
UPF3AP2-201ENST00000457924 NCOA2Q15596 1464 aa22.98■■□□□ 1.27
UPF3AP2-201ENST00000457924 CPS1P31327 1500 aa22.97■■□□□ 1.27
UPF3AP2-201ENST00000457924 NEURL4Q96JN8 1562 aa22.97■■□□□ 1.27
UPF3AP2-201ENST00000457924 ANKLE2Q86XL3 938 aa22.95■■□□□ 1.26
UPF3AP2-201ENST00000457924 SHANK2Q9UPX8 1470 aa22.94■■□□□ 1.26
UPF3AP2-201ENST00000457924 TOM1O60784 492 aa22.94■■□□□ 1.26
UPF3AP2-201ENST00000457924 THEMISQ8N1K5 641 aaPredicted RBP22.93■■□□□ 1.26
UPF3AP2-201ENST00000457924 TSPY4P0CV99 314 aa22.92■■□□□ 1.26
UPF3AP2-201ENST00000457924 TSPY10P0CW01 314 aa22.92■■□□□ 1.26
UPF3AP2-201ENST00000457924 PIP4K2BP78356 416 aa22.92■■□□□ 1.26
UPF3AP2-201ENST00000457924 NLRP1Q9C000 1473 aa22.92■■□□□ 1.26
UPF3AP2-201ENST00000457924 MIA2Q96PC5 1412 aa22.91■■□□□ 1.26
UPF3AP2-201ENST00000457924 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.91■■□□□ 1.26
UPF3AP2-201ENST00000457924 ARHGEF5Q12774 1597 aa22.91■■□□□ 1.26
UPF3AP2-201ENST00000457924 UGGT1Q9NYU2 1555 aa22.9■■□□□ 1.26
UPF3AP2-201ENST00000457924 HSPA1LP34931 641 aa22.9■■□□□ 1.26
UPF3AP2-201ENST00000457924 DEPDC5O75140 1603 aa22.86■■□□□ 1.25
UPF3AP2-201ENST00000457924 VWDEQ8N2E2 1590 aa22.86■■□□□ 1.25
UPF3AP2-201ENST00000457924 NPHP4O75161 1426 aaPredicted RBP22.86■■□□□ 1.25
UPF3AP2-201ENST00000457924 MED14O60244 1454 aa22.85■■□□□ 1.25
UPF3AP2-201ENST00000457924 MYCNP04198 464 aaPredicted RBP22.84■■□□□ 1.25
UPF3AP2-201ENST00000457924 MED1Q15648 1581 aaPredicted RBP22.83■■□□□ 1.25
UPF3AP2-201ENST00000457924 IQGAP1P46940 1657 aa22.83■■□□□ 1.24
UPF3AP2-201ENST00000457924 ZC3H13Q5T200 1668 aaKnown RBP22.83■■□□□ 1.24
UPF3AP2-201ENST00000457924 RNF17Q9BXT8 1623 aaKnown RBP22.82■■□□□ 1.24
UPF3AP2-201ENST00000457924 MAST1Q9Y2H9 1570 aa22.8■■□□□ 1.24
UPF3AP2-201ENST00000457924 ABCC3O15438 1527 aa22.8■■□□□ 1.24
UPF3AP2-201ENST00000457924 LRRC9Q6ZRR7 1453 aa22.79■■□□□ 1.24
UPF3AP2-201ENST00000457924 EIF2AK4Q9P2K8 1649 aaKnown RBP22.79■■□□□ 1.24
UPF3AP2-201ENST00000457924 ERVK-7P63135 1459 aa22.75■■□□□ 1.23
UPF3AP2-201ENST00000457924 CFAP65Q6ZU64 1925 aaKnown RBP22.74■■□□□ 1.23
UPF3AP2-201ENST00000457924 ALKQ9UM73 1620 aa22.74■■□□□ 1.23
UPF3AP2-201ENST00000457924 VPS8Q8N3P4 1428 aa22.74■■□□□ 1.23
UPF3AP2-201ENST00000457924 STRCP1A6NGW2 1772 aa22.73■■□□□ 1.23
UPF3AP2-201ENST00000457924 CEP152O94986 1710 aa22.73■■□□□ 1.23
UPF3AP2-201ENST00000457924 C1QBPQ07021 282 aaKnown RBP22.72■■□□□ 1.23
UPF3AP2-201ENST00000457924 LRRC7Q96NW7 1537 aa22.72■■□□□ 1.23
UPF3AP2-201ENST00000457924 SYNMO15061 1565 aa22.72■■□□□ 1.23
UPF3AP2-201ENST00000457924 MROH1Q8NDA8 1641 aa22.71■■□□□ 1.23
UPF3AP2-201ENST00000457924 UBR1Q8IWV7 1749 aa22.71■■□□□ 1.23
UPF3AP2-201ENST00000457924 DUOX2Q9NRD8 1548 aa22.69■■□□□ 1.22
UPF3AP2-201ENST00000457924 MYOM3Q5VTT5 1437 aa22.69■■□□□ 1.22
UPF3AP2-201ENST00000457924 KANK4Q5T7N3 995 aaPredicted RBP22.67■■□□□ 1.22
UPF3AP2-201ENST00000457924 MAP3K1Q13233 1512 aa22.67■■□□□ 1.22
UPF3AP2-201ENST00000457924 SCAF11Q99590 1463 aaKnown RBP22.66■■□□□ 1.22
UPF3AP2-201ENST00000457924 TXNDC2Q86VQ3 553 aa22.63■■□□□ 1.21
UPF3AP2-201ENST00000457924 SLIT1O75093 1534 aa22.62■■□□□ 1.21
UPF3AP2-201ENST00000457924 ARHGAP31Q2M1Z3 1444 aa22.62■■□□□ 1.21
UPF3AP2-201ENST00000457924 PRDM15P57071 1507 aaPredicted RBP22.62■■□□□ 1.21
UPF3AP2-201ENST00000457924 ARHGAP23Q9P227 1491 aa22.61■■□□□ 1.21
UPF3AP2-201ENST00000457924 LTKP29376 864 aa22.61■■□□□ 1.21
UPF3AP2-201ENST00000457924 EID1Q9Y6B2 187 aa22.61■■□□□ 1.21
UPF3AP2-201ENST00000457924 KIF15Q9NS87 1388 aa22.61■■□□□ 1.21
UPF3AP2-201ENST00000457924 ERBINQ96RT1 1412 aa22.6■■□□□ 1.21
UPF3AP2-201ENST00000457924 LOC105371045A0A1W2PR82 267 aa22.59■■□□□ 1.21
UPF3AP2-201ENST00000457924 CROCC2H7BZ55 1655 aa22.58■■□□□ 1.21
UPF3AP2-201ENST00000457924 RRP7BPQ9NSQ0 103 aa22.58■■□□□ 1.21
UPF3AP2-201ENST00000457924 STAG3Q9UJ98 1225 aa22.56■■□□□ 1.2
UPF3AP2-201ENST00000457924 XIRP1Q702N8 1843 aaKnown RBP22.56■■□□□ 1.2
UPF3AP2-201ENST00000457924 PIK3C2BO00750 1634 aa22.56■■□□□ 1.2
UPF3AP2-201ENST00000457924 ABCC5O15440 1437 aa22.56■■□□□ 1.2
UPF3AP2-201ENST00000457924 KANK1Q14678 1352 aa22.55■■□□□ 1.2
UPF3AP2-201ENST00000457924 SAMD1Q6SPF0 538 aaPredicted RBP22.55■■□□□ 1.2
UPF3AP2-201ENST00000457924 PTPN23Q9H3S7 1636 aa22.54■■□□□ 1.2
UPF3AP2-201ENST00000457924 TMEM2Q9UHN6 1383 aa22.53■■□□□ 1.2
UPF3AP2-201ENST00000457924 APLP2Q06481 763 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms