RNA–Protein interactions for RNA: ENST00000457647.2

RGPD4-AS1-202, Transcript of RGPD4 antisense RNA 1 (head to head), humanhuman

TSL 1 (best) BASIC

Gene RGPD4-AS1, Length 1,792 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-AS1-202ENST00000457647 RNF17Q9BXT8 1623 aaKnown RBP18.9■□□□□ 0.62
RGPD4-AS1-202ENST00000457647 DEPDC5O75140 1603 aa18.89■□□□□ 0.61
RGPD4-AS1-202ENST00000457647 MLECQ14165 292 aa18.88■□□□□ 0.61
RGPD4-AS1-202ENST00000457647 UNC13BO14795 1591 aa18.88■□□□□ 0.61
RGPD4-AS1-202ENST00000457647 GGT6Q6P531 493 aa18.86■□□□□ 0.61
RGPD4-AS1-202ENST00000457647 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.86■□□□□ 0.61
RGPD4-AS1-202ENST00000457647 PRDM15P57071 1507 aaPredicted RBP18.85■□□□□ 0.61
RGPD4-AS1-202ENST00000457647 CEP152O94986 1710 aa18.83■□□□□ 0.61
RGPD4-AS1-202ENST00000457647 TRIM52Q96A61 297 aa18.81■□□□□ 0.6
RGPD4-AS1-202ENST00000457647 NUP155O75694 1391 aa18.81■□□□□ 0.6
RGPD4-AS1-202ENST00000457647 VWDEQ8N2E2 1590 aa18.81■□□□□ 0.6
RGPD4-AS1-202ENST00000457647 IQGAP3Q86VI3 1631 aa18.8■□□□□ 0.6
RGPD4-AS1-202ENST00000457647 PZPP20742 1482 aa18.79■□□□□ 0.6
RGPD4-AS1-202ENST00000457647 KDM5DQ9BY66 1539 aa18.79■□□□□ 0.6
RGPD4-AS1-202ENST00000457647 HRCP23327 699 aa18.78■□□□□ 0.6
RGPD4-AS1-202ENST00000457647 CLTCQ00610 1675 aaKnown RBP18.78■□□□□ 0.6
RGPD4-AS1-202ENST00000457647 FER1L4A9Z1Z3 1794 aa18.78■□□□□ 0.6
RGPD4-AS1-202ENST00000457647 ABCC3O15438 1527 aa18.78■□□□□ 0.6
RGPD4-AS1-202ENST00000457647 FAM135AQ9P2D6 1515 aa18.78■□□□□ 0.6
RGPD4-AS1-202ENST00000457647 ADAMTSL3P82987 1691 aa18.77■□□□□ 0.6
RGPD4-AS1-202ENST00000457647 MADDQ8WXG6 1647 aa18.77■□□□□ 0.59
RGPD4-AS1-202ENST00000457647 CFAP65Q6ZU64 1925 aaKnown RBP18.75■□□□□ 0.59
RGPD4-AS1-202ENST00000457647 KANK1Q14678 1352 aa18.75■□□□□ 0.59
RGPD4-AS1-202ENST00000457647 WASHC2CQ9Y4E1 1318 aa18.75■□□□□ 0.59
RGPD4-AS1-202ENST00000457647 ZC3H13Q5T200 1668 aaKnown RBP18.74■□□□□ 0.59
RGPD4-AS1-202ENST00000457647 CAMSAP1Q5T5Y3 1602 aa18.73■□□□□ 0.59
RGPD4-AS1-202ENST00000457647 TET3O43151 1660 aa18.73■□□□□ 0.59
RGPD4-AS1-202ENST00000457647 RIMS1Q86UR5 1692 aaKnown RBP18.73■□□□□ 0.59
RGPD4-AS1-202ENST00000457647 LMTK2Q8IWU2 1503 aa18.73■□□□□ 0.59
RGPD4-AS1-202ENST00000457647 MPHOSPH9Q99550 1183 aa18.71■□□□□ 0.59
RGPD4-AS1-202ENST00000457647 SLC4A1APQ9BWU0 796 aaKnown RBP18.71■□□□□ 0.59
RGPD4-AS1-202ENST00000457647 E9PCH4 1651 aa18.71■□□□□ 0.59
RGPD4-AS1-202ENST00000457647 PPP6R1Q9UPN7 881 aa18.7■□□□□ 0.58
RGPD4-AS1-202ENST00000457647 EFCAB6Q5THR3 1501 aa18.7■□□□□ 0.58
RGPD4-AS1-202ENST00000457647 FOXD1Q16676 465 aa18.7■□□□□ 0.58
RGPD4-AS1-202ENST00000457647 DHX57Q6P158 1386 aaKnown RBP18.68■□□□□ 0.58
RGPD4-AS1-202ENST00000457647 MROH2AA6NES4 1674 aa18.68■□□□□ 0.58
RGPD4-AS1-202ENST00000457647 PKD2Q13563 968 aa18.68■□□□□ 0.58
RGPD4-AS1-202ENST00000457647 C3P01024 1663 aa18.67■□□□□ 0.58
RGPD4-AS1-202ENST00000457647 NPATQ14207 1427 aa18.67■□□□□ 0.58
RGPD4-AS1-202ENST00000457647 KDM4FA0A1W2PPD8 638 aa18.67■□□□□ 0.58
RGPD4-AS1-202ENST00000457647 ESF1Q9H501 851 aaKnown RBP18.67■□□□□ 0.58
RGPD4-AS1-202ENST00000457647 CNTLNQ9NXG0 1405 aa18.66■□□□□ 0.58
RGPD4-AS1-202ENST00000457647 ACIN1Q9UKV3 1341 aaKnown RBP18.66■□□□□ 0.58
RGPD4-AS1-202ENST00000457647 ZMYM3Q14202 1370 aa18.66■□□□□ 0.58
RGPD4-AS1-202ENST00000457647 CEBPAP49715 358 aaPredicted RBP18.65■□□□□ 0.58
RGPD4-AS1-202ENST00000457647 PLPPR3Q6T4P5 718 aa18.64■□□□□ 0.57
RGPD4-AS1-202ENST00000457647 FBXO31Q5XUX0 539 aaPredicted RBP18.63■□□□□ 0.57
RGPD4-AS1-202ENST00000457647 ARHGAP31Q2M1Z3 1444 aa18.63■□□□□ 0.57
RGPD4-AS1-202ENST00000457647 PREX1Q8TCU6 1659 aa18.62■□□□□ 0.57
RGPD4-AS1-202ENST00000457647 SPHKAPQ2M3C7 1700 aa18.61■□□□□ 0.57
RGPD4-AS1-202ENST00000457647 PTPRMP28827 1452 aa18.6■□□□□ 0.57
RGPD4-AS1-202ENST00000457647 PLA2R1Q13018 1463 aa18.6■□□□□ 0.57
RGPD4-AS1-202ENST00000457647 RPRD2Q5VT52 1461 aaKnown RBP18.6■□□□□ 0.57
RGPD4-AS1-202ENST00000457647 ERVK-7P63135 1459 aa18.58■□□□□ 0.57
RGPD4-AS1-202ENST00000457647 SYNMO15061 1565 aa18.58■□□□□ 0.56
RGPD4-AS1-202ENST00000457647 NOS1P29475 1434 aa18.57■□□□□ 0.56
RGPD4-AS1-202ENST00000457647 SPATA31D1Q6ZQQ2 1576 aa18.57■□□□□ 0.56
RGPD4-AS1-202ENST00000457647 UGGT1Q9NYU2 1555 aa18.57■□□□□ 0.56
RGPD4-AS1-202ENST00000457647 PTPRTO14522 1441 aa18.56■□□□□ 0.56
RGPD4-AS1-202ENST00000457647 ANKRD30BQ9BXX2 1392 aa18.56■□□□□ 0.56
RGPD4-AS1-202ENST00000457647 TRPM2O94759 1503 aa18.54■□□□□ 0.56
RGPD4-AS1-202ENST00000457647 CCER1Q8TC90 406 aaPredicted RBP18.53■□□□□ 0.56
RGPD4-AS1-202ENST00000457647 CLTCL1P53675 1640 aa18.53■□□□□ 0.56
RGPD4-AS1-202ENST00000457647 TNRQ92752 1358 aa18.51■□□□□ 0.55
RGPD4-AS1-202ENST00000457647 SETD1BQ9UPS6 1966 aaKnown RBP18.51■□□□□ 0.55
RGPD4-AS1-202ENST00000457647 PIK3C2BO00750 1634 aa18.5■□□□□ 0.55
RGPD4-AS1-202ENST00000457647 SIN3AQ96ST3 1273 aa18.5■□□□□ 0.55
RGPD4-AS1-202ENST00000457647 MYO5BQ9ULV0 1848 aa18.48■□□□□ 0.55
RGPD4-AS1-202ENST00000457647 MYO3AQ8NEV4 1616 aa18.47■□□□□ 0.55
RGPD4-AS1-202ENST00000457647 IDI1Q13907 227 aa18.47■□□□□ 0.55
RGPD4-AS1-202ENST00000457647 CCDC144AA2RUR9 1427 aa18.46■□□□□ 0.55
RGPD4-AS1-202ENST00000457647 KIF1BO60333 1816 aa18.45■□□□□ 0.54
RGPD4-AS1-202ENST00000457647 NEUROD1Q13562 356 aa18.43■□□□□ 0.54
RGPD4-AS1-202ENST00000457647 SLC52A1Q9NWF4 448 aa18.42■□□□□ 0.54
RGPD4-AS1-202ENST00000457647 TMEM131LA2VDJ0 1609 aa18.42■□□□□ 0.54
RGPD4-AS1-202ENST00000457647 NLRP1Q9C000 1473 aa18.41■□□□□ 0.54
RGPD4-AS1-202ENST00000457647 UBR1Q8IWV7 1749 aa18.41■□□□□ 0.54
RGPD4-AS1-202ENST00000457647 CEP170BQ9Y4F5 1589 aaPredicted RBP18.4■□□□□ 0.54
RGPD4-AS1-202ENST00000457647 CLSPNQ9HAW4 1339 aa18.4■□□□□ 0.54
RGPD4-AS1-202ENST00000457647 ZNF142P52746 1687 aaPredicted RBP18.4■□□□□ 0.54
RGPD4-AS1-202ENST00000457647 CHGAP10645 457 aaKnown RBP18.4■□□□□ 0.54
RGPD4-AS1-202ENST00000457647 ADGRB3O60242 1522 aa18.4■□□□□ 0.54
RGPD4-AS1-202ENST00000457647 SPATA31E1Q6ZUB1 1445 aa18.39■□□□□ 0.54
RGPD4-AS1-202ENST00000457647 A2ML1A8K2U0 1454 aa18.38■□□□□ 0.53
RGPD4-AS1-202ENST00000457647 UHRF1BP1Q6BDS2 1440 aa18.37■□□□□ 0.53
RGPD4-AS1-202ENST00000457647 RGL3Q3MIN7 710 aa18.37■□□□□ 0.53
RGPD4-AS1-202ENST00000457647 KDM5AP29375 1690 aaKnown RBP18.35■□□□□ 0.53
RGPD4-AS1-202ENST00000457647 STAG3Q9UJ98 1225 aa18.35■□□□□ 0.53
RGPD4-AS1-202ENST00000457647 LMTK3Q96Q04 1460 aa18.32■□□□□ 0.52
RGPD4-AS1-202ENST00000457647 NEURL4Q96JN8 1562 aa18.32■□□□□ 0.52
RGPD4-AS1-202ENST00000457647 IFT172Q9UG01 1749 aa18.32■□□□□ 0.52
RGPD4-AS1-202ENST00000457647 PPLO60437 1756 aa18.31■□□□□ 0.52
RGPD4-AS1-202ENST00000457647 ZNF326Q5BKZ1 582 aaKnown RBP18.31■□□□□ 0.52
RGPD4-AS1-202ENST00000457647 NEXMIFQ5QGS0 1516 aa18.3■□□□□ 0.52
RGPD4-AS1-202ENST00000457647 NUTM2DQ5VT03 806 aaPredicted RBP18.3■□□□□ 0.52
RGPD4-AS1-202ENST00000457647 L3MBTL2Q969R5 705 aa18.3■□□□□ 0.52
RGPD4-AS1-202ENST00000457647 HSPA2P54652 639 aa18.28■□□□□ 0.52
RGPD4-AS1-202ENST00000457647 ZFYVE9O95405 1425 aa18.28■□□□□ 0.52
RGPD4-AS1-202ENST00000457647 TONSLQ96HA7 1378 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms