RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 RNF17Q9BXT8 1623 aaKnown RBP21.28■■□□□ 1
TIMP1-205ENST00000456754 NAIPQ13075 1403 aa21.28■■□□□ 1
TIMP1-205ENST00000456754 CLTCQ00610 1675 aaKnown RBP21.24■□□□□ 0.99
TIMP1-205ENST00000456754 DEPDC5O75140 1603 aa21.24■□□□□ 0.99
TIMP1-205ENST00000456754 HFM1A2PYH4 1435 aa21.23■□□□□ 0.99
TIMP1-205ENST00000456754 PLPPR3Q6T4P5 718 aa21.23■□□□□ 0.99
TIMP1-205ENST00000456754 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.23■□□□□ 0.99
TIMP1-205ENST00000456754 CEP152O94986 1710 aa21.22■□□□□ 0.99
TIMP1-205ENST00000456754 PRDM15P57071 1507 aaPredicted RBP21.19■□□□□ 0.98
TIMP1-205ENST00000456754 CEBPAP49715 358 aaPredicted RBP21.19■□□□□ 0.98
TIMP1-205ENST00000456754 UNC13BO14795 1591 aa21.19■□□□□ 0.98
TIMP1-205ENST00000456754 PTPRMP28827 1452 aa21.18■□□□□ 0.98
TIMP1-205ENST00000456754 ABCC3O15438 1527 aa21.18■□□□□ 0.98
TIMP1-205ENST00000456754 C3P01024 1663 aa21.16■□□□□ 0.98
TIMP1-205ENST00000456754 KDM5DQ9BY66 1539 aa21.16■□□□□ 0.98
TIMP1-205ENST00000456754 VWDEQ8N2E2 1590 aa21.15■□□□□ 0.98
TIMP1-205ENST00000456754 TRIM26Q12899 539 aaPredicted RBP21.15■□□□□ 0.98
TIMP1-205ENST00000456754 WASHC2CQ9Y4E1 1318 aa21.14■□□□□ 0.97
TIMP1-205ENST00000456754 SETD5Q9C0A6 1442 aa21.12■□□□□ 0.97
TIMP1-205ENST00000456754 MROH2AA6NES4 1674 aa21.12■□□□□ 0.97
TIMP1-205ENST00000456754 CAMSAP1Q5T5Y3 1602 aa21.12■□□□□ 0.97
TIMP1-205ENST00000456754 ESF1Q9H501 851 aaKnown RBP21.12■□□□□ 0.97
TIMP1-205ENST00000456754 ZMYM3Q14202 1370 aa21.11■□□□□ 0.97
TIMP1-205ENST00000456754 CFAP65Q6ZU64 1925 aaKnown RBP21.11■□□□□ 0.97
TIMP1-205ENST00000456754 ZC3H13Q5T200 1668 aaKnown RBP21.11■□□□□ 0.97
TIMP1-205ENST00000456754 RAB3GAP2Q9H2M9 1393 aa21.1■□□□□ 0.97
TIMP1-205ENST00000456754 CNTLNQ9NXG0 1405 aa21.1■□□□□ 0.97
TIMP1-205ENST00000456754 NUP155O75694 1391 aa21.1■□□□□ 0.97
TIMP1-205ENST00000456754 IQGAP3Q86VI3 1631 aa21.09■□□□□ 0.97
TIMP1-205ENST00000456754 PPP6R1Q9UPN7 881 aa21.09■□□□□ 0.97
TIMP1-205ENST00000456754 KANK1Q14678 1352 aa21.08■□□□□ 0.96
TIMP1-205ENST00000456754 FBXO31Q5XUX0 539 aaPredicted RBP21.07■□□□□ 0.96
TIMP1-205ENST00000456754 FAM135AQ9P2D6 1515 aa21.07■□□□□ 0.96
TIMP1-205ENST00000456754 LMTK2Q8IWU2 1503 aa21.06■□□□□ 0.96
TIMP1-205ENST00000456754 TRIM52Q96A61 297 aa21.06■□□□□ 0.96
TIMP1-205ENST00000456754 PZPP20742 1482 aa21.05■□□□□ 0.96
TIMP1-205ENST00000456754 TET3O43151 1660 aa21.04■□□□□ 0.96
TIMP1-205ENST00000456754 EFCAB6Q5THR3 1501 aa21.04■□□□□ 0.96
TIMP1-205ENST00000456754 NPATQ14207 1427 aa21.03■□□□□ 0.96
TIMP1-205ENST00000456754 E9PCH4 1651 aa21.02■□□□□ 0.96
TIMP1-205ENST00000456754 PREX1Q8TCU6 1659 aa21■□□□□ 0.95
TIMP1-205ENST00000456754 PCGF6Q9BYE7 350 aa21■□□□□ 0.95
TIMP1-205ENST00000456754 AEBP2Q6ZN18 517 aaPredicted RBP20.99■□□□□ 0.95
TIMP1-205ENST00000456754 ERVK-7P63135 1459 aa20.98■□□□□ 0.95
TIMP1-205ENST00000456754 ARHGAP31Q2M1Z3 1444 aa20.97■□□□□ 0.95
TIMP1-205ENST00000456754 FOXD1Q16676 465 aa20.96■□□□□ 0.95
TIMP1-205ENST00000456754 SPATA31D1Q6ZQQ2 1576 aa20.96■□□□□ 0.95
TIMP1-205ENST00000456754 SYNMO15061 1565 aa20.94■□□□□ 0.94
TIMP1-205ENST00000456754 SLC4A1APQ9BWU0 796 aaKnown RBP20.94■□□□□ 0.94
TIMP1-205ENST00000456754 MYO3AQ8NEV4 1616 aa20.93■□□□□ 0.94
TIMP1-205ENST00000456754 PKD2Q13563 968 aa20.93■□□□□ 0.94
TIMP1-205ENST00000456754 TNRQ92752 1358 aa20.93■□□□□ 0.94
TIMP1-205ENST00000456754 MPHOSPH9Q99550 1183 aa20.92■□□□□ 0.94
TIMP1-205ENST00000456754 UGGT1Q9NYU2 1555 aa20.92■□□□□ 0.94
TIMP1-205ENST00000456754 SETD1BQ9UPS6 1966 aaKnown RBP20.91■□□□□ 0.94
TIMP1-205ENST00000456754 NOS1P29475 1434 aa20.9■□□□□ 0.94
TIMP1-205ENST00000456754 RPRD2Q5VT52 1461 aaKnown RBP20.89■□□□□ 0.94
TIMP1-205ENST00000456754 LMTK3Q96Q04 1460 aa20.89■□□□□ 0.94
TIMP1-205ENST00000456754 SPHKAPQ2M3C7 1700 aa20.89■□□□□ 0.93
TIMP1-205ENST00000456754 HRCP23327 699 aa20.87■□□□□ 0.93
TIMP1-205ENST00000456754 PLA2R1Q13018 1463 aa20.87■□□□□ 0.93
TIMP1-205ENST00000456754 HSPA2P54652 639 aa20.86■□□□□ 0.93
TIMP1-205ENST00000456754 CEP170BQ9Y4F5 1589 aaPredicted RBP20.85■□□□□ 0.93
TIMP1-205ENST00000456754 ZNF142P52746 1687 aaPredicted RBP20.85■□□□□ 0.93
TIMP1-205ENST00000456754 UHRF1BP1Q6BDS2 1440 aa20.85■□□□□ 0.93
TIMP1-205ENST00000456754 PIK3C2BO00750 1634 aa20.85■□□□□ 0.93
TIMP1-205ENST00000456754 PTPRTO14522 1441 aa20.83■□□□□ 0.93
TIMP1-205ENST00000456754 IDI1Q13907 227 aa20.82■□□□□ 0.92
TIMP1-205ENST00000456754 CLTCL1P53675 1640 aa20.82■□□□□ 0.92
TIMP1-205ENST00000456754 A2ML1A8K2U0 1454 aa20.81■□□□□ 0.92
TIMP1-205ENST00000456754 MYO5BQ9ULV0 1848 aa20.81■□□□□ 0.92
TIMP1-205ENST00000456754 TRPM2O94759 1503 aa20.8■□□□□ 0.92
TIMP1-205ENST00000456754 UBR1Q8IWV7 1749 aa20.8■□□□□ 0.92
TIMP1-205ENST00000456754 NLRP1Q9C000 1473 aa20.8■□□□□ 0.92
TIMP1-205ENST00000456754 DHX57Q6P158 1386 aaKnown RBP20.76■□□□□ 0.91
TIMP1-205ENST00000456754 ACIN1Q9UKV3 1341 aaKnown RBP20.75■□□□□ 0.91
TIMP1-205ENST00000456754 ADGRB3O60242 1522 aa20.74■□□□□ 0.91
TIMP1-205ENST00000456754 TMEM131LA2VDJ0 1609 aa20.74■□□□□ 0.91
TIMP1-205ENST00000456754 CHGAP10645 457 aaKnown RBP20.73■□□□□ 0.91
TIMP1-205ENST00000456754 ANKRD30BQ9BXX2 1392 aa20.72■□□□□ 0.91
TIMP1-205ENST00000456754 SLC52A1Q9NWF4 448 aa20.72■□□□□ 0.91
TIMP1-205ENST00000456754 STRCQ7RTU9 1775 aa20.71■□□□□ 0.91
TIMP1-205ENST00000456754 KIF1BO60333 1816 aa20.69■□□□□ 0.9
TIMP1-205ENST00000456754 STAG3Q9UJ98 1225 aa20.69■□□□□ 0.9
TIMP1-205ENST00000456754 NCKAP5LQ9HCH0 1330 aa20.68■□□□□ 0.9
TIMP1-205ENST00000456754 CCDC144AA2RUR9 1427 aa20.68■□□□□ 0.9
TIMP1-205ENST00000456754 KDM5AP29375 1690 aaKnown RBP20.67■□□□□ 0.9
TIMP1-205ENST00000456754 SENP3Q9H4L4 574 aaPredicted RBP20.66■□□□□ 0.9
TIMP1-205ENST00000456754 NUTM2DQ5VT03 806 aaPredicted RBP20.65■□□□□ 0.9
TIMP1-205ENST00000456754 THEMISQ8N1K5 641 aaPredicted RBP20.65■□□□□ 0.9
TIMP1-205ENST00000456754 ARHGAP23Q9P227 1491 aa20.64■□□□□ 0.89
TIMP1-205ENST00000456754 LTKP29376 864 aa20.64■□□□□ 0.89
TIMP1-205ENST00000456754 POLR1AO95602 1720 aaPredicted RBP20.64■□□□□ 0.89
TIMP1-205ENST00000456754 NEURL4Q96JN8 1562 aa20.63■□□□□ 0.89
TIMP1-205ENST00000456754 TMEM2Q9UHN6 1383 aa20.63■□□□□ 0.89
TIMP1-205ENST00000456754 SLIT1O75093 1534 aa20.63■□□□□ 0.89
TIMP1-205ENST00000456754 SIN3AQ96ST3 1273 aa20.62■□□□□ 0.89
TIMP1-205ENST00000456754 ZFYVE9O95405 1425 aa20.61■□□□□ 0.89
TIMP1-205ENST00000456754 SPATA31E1Q6ZUB1 1445 aa20.61■□□□□ 0.89
TIMP1-205ENST00000456754 RIMS2Q9UQ26 1411 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms