RNA–Protein interactions for RNA: ENST00000456542.5

SP140-207, Transcript of SP140 nuclear body protein, humanhuman

TSL 4

Gene SP140, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-207ENST00000456542 NCOA1Q15788 1441 aa13.04□□□□□ -0.32
SP140-207ENST00000456542 CLTCQ00610 1675 aaKnown RBP13.03□□□□□ -0.32
SP140-207ENST00000456542 KIF3BO15066 747 aa13.03□□□□□ -0.32
SP140-207ENST00000456542 ESF1Q9H501 851 aaKnown RBP13.03□□□□□ -0.32
SP140-207ENST00000456542 SETD1BQ9UPS6 1966 aaKnown RBP13.03□□□□□ -0.32
SP140-207ENST00000456542 GGT6Q6P531 493 aa13.02□□□□□ -0.33
SP140-207ENST00000456542 ILDR1Q86SU0 546 aaPredicted RBP13.02□□□□□ -0.33
SP140-207ENST00000456542 ZC3H13Q5T200 1668 aaKnown RBP13.02□□□□□ -0.33
SP140-207ENST00000456542 PTPRKQ15262 1439 aa13.01□□□□□ -0.33
SP140-207ENST00000456542 KDM5DQ9BY66 1539 aa13.01□□□□□ -0.33
SP140-207ENST00000456542 DEPDC5O75140 1603 aa13□□□□□ -0.33
SP140-207ENST00000456542 MROH1Q8NDA8 1641 aa13□□□□□ -0.33
SP140-207ENST00000456542 ROCK1Q13464 1354 aa13□□□□□ -0.33
SP140-207ENST00000456542 RRP7BPQ9NSQ0 103 aa13□□□□□ -0.33
SP140-207ENST00000456542 CHIC2Q9UKJ5 165 aa13□□□□□ -0.33
SP140-207ENST00000456542 PREX1Q8TCU6 1659 aa12.99□□□□□ -0.33
SP140-207ENST00000456542 PRDM15P57071 1507 aaPredicted RBP12.99□□□□□ -0.33
SP140-207ENST00000456542 ZMYM3Q14202 1370 aa12.98□□□□□ -0.33
SP140-207ENST00000456542 NPATQ14207 1427 aa12.97□□□□□ -0.33
SP140-207ENST00000456542 CEBPAP49715 358 aaPredicted RBP12.97□□□□□ -0.33
SP140-207ENST00000456542 LMTK3Q96Q04 1460 aa12.97□□□□□ -0.33
SP140-207ENST00000456542 ANKRD50Q9ULJ7 1429 aa12.96□□□□□ -0.33
SP140-207ENST00000456542 ABCC3O15438 1527 aa12.96□□□□□ -0.33
SP140-207ENST00000456542 CEP152O94986 1710 aa12.96□□□□□ -0.34
SP140-207ENST00000456542 WASHC2CQ9Y4E1 1318 aa12.95□□□□□ -0.34
SP140-207ENST00000456542 PLPPR3Q6T4P5 718 aa12.95□□□□□ -0.34
SP140-207ENST00000456542 PZPP20742 1482 aa12.94□□□□□ -0.34
SP140-207ENST00000456542 CAMSAP1Q5T5Y3 1602 aa12.94□□□□□ -0.34
SP140-207ENST00000456542 VWDEQ8N2E2 1590 aa12.94□□□□□ -0.34
SP140-207ENST00000456542 UNC13BO14795 1591 aa12.92□□□□□ -0.34
SP140-207ENST00000456542 ITGAEP38570 1179 aa12.92□□□□□ -0.34
SP140-207ENST00000456542 UHRF1BP1Q6BDS2 1440 aa12.92□□□□□ -0.34
SP140-207ENST00000456542 GCC2Q8IWJ2 1684 aa12.92□□□□□ -0.34
SP140-207ENST00000456542 LMTK2Q8IWU2 1503 aa12.92□□□□□ -0.34
SP140-207ENST00000456542 KANK1Q14678 1352 aa12.92□□□□□ -0.34
SP140-207ENST00000456542 ZNF142P52746 1687 aaPredicted RBP12.91□□□□□ -0.34
SP140-207ENST00000456542 MYO3AQ8NEV4 1616 aa12.91□□□□□ -0.34
SP140-207ENST00000456542 ARHGAP31Q2M1Z3 1444 aa12.9□□□□□ -0.34
SP140-207ENST00000456542 SPATA31D1Q6ZQQ2 1576 aa12.89□□□□□ -0.35
SP140-207ENST00000456542 HFM1A2PYH4 1435 aa12.88□□□□□ -0.35
SP140-207ENST00000456542 TET3O43151 1660 aa12.87□□□□□ -0.35
SP140-207ENST00000456542 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.87□□□□□ -0.35
SP140-207ENST00000456542 CFAP65Q6ZU64 1925 aaKnown RBP12.87□□□□□ -0.35
SP140-207ENST00000456542 IQGAP3Q86VI3 1631 aa12.87□□□□□ -0.35
SP140-207ENST00000456542 EFCAB6Q5THR3 1501 aa12.87□□□□□ -0.35
SP140-207ENST00000456542 NAIPQ13075 1403 aa12.87□□□□□ -0.35
SP140-207ENST00000456542 CEP170BQ9Y4F5 1589 aaPredicted RBP12.86□□□□□ -0.35
SP140-207ENST00000456542 ERVK-7P63135 1459 aa12.86□□□□□ -0.35
SP140-207ENST00000456542 TNRQ92752 1358 aa12.86□□□□□ -0.35
SP140-207ENST00000456542 MSH5O43196 834 aa12.86□□□□□ -0.35
SP140-207ENST00000456542 FBXO31Q5XUX0 539 aaPredicted RBP12.85□□□□□ -0.35
SP140-207ENST00000456542 A2ML1A8K2U0 1454 aa12.85□□□□□ -0.35
SP140-207ENST00000456542 RPRD2Q5VT52 1461 aaKnown RBP12.85□□□□□ -0.35
SP140-207ENST00000456542 NLRP1Q9C000 1473 aa12.85□□□□□ -0.35
SP140-207ENST00000456542 HSPA2P54652 639 aa12.83□□□□□ -0.36
SP140-207ENST00000456542 PIAS4Q8N2W9 510 aaPredicted RBP12.83□□□□□ -0.36
SP140-207ENST00000456542 STRCQ7RTU9 1775 aa12.81□□□□□ -0.36
SP140-207ENST00000456542 PLA2R1Q13018 1463 aa12.81□□□□□ -0.36
SP140-207ENST00000456542 POTEDQ86YR6 584 aa12.81□□□□□ -0.36
SP140-207ENST00000456542 NUP155O75694 1391 aa12.81□□□□□ -0.36
SP140-207ENST00000456542 NOS1P29475 1434 aa12.8□□□□□ -0.36
SP140-207ENST00000456542 E9PCH4 1651 aa12.8□□□□□ -0.36
SP140-207ENST00000456542 UGGT1Q9NYU2 1555 aa12.79□□□□□ -0.36
SP140-207ENST00000456542 KDM5AP29375 1690 aaKnown RBP12.79□□□□□ -0.36
SP140-207ENST00000456542 SYNMO15061 1565 aa12.78□□□□□ -0.36
SP140-207ENST00000456542 ADRA2BP18089 450 aa12.78□□□□□ -0.36
SP140-207ENST00000456542 UBR1Q8IWV7 1749 aa12.78□□□□□ -0.36
SP140-207ENST00000456542 POLR1AO95602 1720 aaPredicted RBP12.76□□□□□ -0.37
SP140-207ENST00000456542 PIK3C2BO00750 1634 aa12.76□□□□□ -0.37
SP140-207ENST00000456542 ACIN1Q9UKV3 1341 aaKnown RBP12.75□□□□□ -0.37
SP140-207ENST00000456542 SPHKAPQ2M3C7 1700 aa12.74□□□□□ -0.37
SP140-207ENST00000456542 PTPRTO14522 1441 aa12.74□□□□□ -0.37
SP140-207ENST00000456542 THEMISQ8N1K5 641 aaPredicted RBP12.74□□□□□ -0.37
SP140-207ENST00000456542 DMRT2Q9Y5R5 561 aa12.74□□□□□ -0.37
SP140-207ENST00000456542 SETD5Q9C0A6 1442 aa12.73□□□□□ -0.37
SP140-207ENST00000456542 PKD2Q13563 968 aa12.73□□□□□ -0.37
SP140-207ENST00000456542 SLC52A1Q9NWF4 448 aa12.73□□□□□ -0.37
SP140-207ENST00000456542 ADGRB3O60242 1522 aa12.72□□□□□ -0.37
SP140-207ENST00000456542 SLIT1O75093 1534 aa12.72□□□□□ -0.37
SP140-207ENST00000456542 IDI1Q13907 227 aa12.71□□□□□ -0.37
SP140-207ENST00000456542 TRIM52Q96A61 297 aa12.71□□□□□ -0.37
SP140-207ENST00000456542 NEURL4Q96JN8 1562 aa12.71□□□□□ -0.37
SP140-207ENST00000456542 ARHGAP23Q9P227 1491 aa12.71□□□□□ -0.38
SP140-207ENST00000456542 MYO5BQ9ULV0 1848 aa12.69□□□□□ -0.38
SP140-207ENST00000456542 TRPM2O94759 1503 aa12.69□□□□□ -0.38
SP140-207ENST00000456542 MED14O60244 1454 aa12.69□□□□□ -0.38
SP140-207ENST00000456542 TMEM131LA2VDJ0 1609 aa12.69□□□□□ -0.38
SP140-207ENST00000456542 RAB3GAP2Q9H2M9 1393 aa12.69□□□□□ -0.38
SP140-207ENST00000456542 NCKAP5LQ9HCH0 1330 aa12.68□□□□□ -0.38
SP140-207ENST00000456542 ANKLE2Q86XL3 938 aa12.68□□□□□ -0.38
SP140-207ENST00000456542 SLC4A1APQ9BWU0 796 aaKnown RBP12.68□□□□□ -0.38
SP140-207ENST00000456542 TMEM2Q9UHN6 1383 aa12.68□□□□□ -0.38
SP140-207ENST00000456542 STAG3Q9UJ98 1225 aa12.67□□□□□ -0.38
SP140-207ENST00000456542 IQGAP1P46940 1657 aa12.67□□□□□ -0.38
SP140-207ENST00000456542 SCAF11Q99590 1463 aaKnown RBP12.66□□□□□ -0.38
SP140-207ENST00000456542 HRCP23327 699 aa12.66□□□□□ -0.38
SP140-207ENST00000456542 CLTCL1P53675 1640 aa12.66□□□□□ -0.38
SP140-207ENST00000456542 KIF1BO60333 1816 aa12.65□□□□□ -0.38
SP140-207ENST00000456542 NPHP4O75161 1426 aaPredicted RBP12.65□□□□□ -0.38
SP140-207ENST00000456542 MPHOSPH9Q99550 1183 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms