RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 NEFLP07196 543 aa10.54□□□□□ -0.72
HDAC9-218ENST00000456174 IL27Q8NEV9 243 aa10.54□□□□□ -0.72
HDAC9-218ENST00000456174 KIF15Q9NS87 1388 aa10.54□□□□□ -0.72
HDAC9-218ENST00000456174 ABCC1P33527 1531 aa10.54□□□□□ -0.72
HDAC9-218ENST00000456174 ARHGEF12Q9NZN5 1544 aa10.54□□□□□ -0.72
HDAC9-218ENST00000456174 PODXL2Q9NZ53 605 aa10.53□□□□□ -0.72
HDAC9-218ENST00000456174 PZPP20742 1482 aa10.53□□□□□ -0.72
HDAC9-218ENST00000456174 PPP1R15AO75807 674 aaPredicted RBP10.52□□□□□ -0.73
HDAC9-218ENST00000456174 PLXNC1O60486 1568 aa10.52□□□□□ -0.73
HDAC9-218ENST00000456174 ANKRD30BQ9BXX2 1392 aa10.5□□□□□ -0.73
HDAC9-218ENST00000456174 FANCAO15360 1455 aa10.5□□□□□ -0.73
HDAC9-218ENST00000456174 TRAPPC8Q9Y2L5 1435 aa10.49□□□□□ -0.73
HDAC9-218ENST00000456174 KDM5DQ9BY66 1539 aa10.49□□□□□ -0.73
HDAC9-218ENST00000456174 RIMBP3CA6NJZ7 1639 aa10.49□□□□□ -0.73
HDAC9-218ENST00000456174 RIMBP3BA6NNM3 1639 aa10.49□□□□□ -0.73
HDAC9-218ENST00000456174 RIMBP3Q9UFD9 1639 aa10.49□□□□□ -0.73
HDAC9-218ENST00000456174 NUP155O75694 1391 aa10.49□□□□□ -0.73
HDAC9-218ENST00000456174 C11orf95C9JLR9 678 aaPredicted RBP10.48□□□□□ -0.73
HDAC9-218ENST00000456174 DUOX2Q9NRD8 1548 aa10.47□□□□□ -0.73
HDAC9-218ENST00000456174 RPRD2Q5VT52 1461 aaKnown RBP10.47□□□□□ -0.73
HDAC9-218ENST00000456174 PKD2Q13563 968 aa10.47□□□□□ -0.73
HDAC9-218ENST00000456174 NOP58Q9Y2X3 529 aaKnown RBP10.47□□□□□ -0.73
HDAC9-218ENST00000456174 UNC13BO14795 1591 aa10.46□□□□□ -0.73
HDAC9-218ENST00000456174 ADGRL1O94910 1474 aa10.46□□□□□ -0.74
HDAC9-218ENST00000456174 CYB5RLQ6IPT4 315 aa10.45□□□□□ -0.74
HDAC9-218ENST00000456174 AFAP1Q8N556 730 aa10.45□□□□□ -0.74
HDAC9-218ENST00000456174 SPAG9O60271 1321 aaKnown RBP10.45□□□□□ -0.74
HDAC9-218ENST00000456174 RTEL1-TNFRSF6BF6WH68 1400 aa10.45□□□□□ -0.74
HDAC9-218ENST00000456174 ZFYVE16Q7Z3T8 1539 aa10.44□□□□□ -0.74
HDAC9-218ENST00000456174 SCAPERQ9BY12 1400 aa10.44□□□□□ -0.74
HDAC9-218ENST00000456174 CFAP74Q9C0B2 1584 aa10.44□□□□□ -0.74
HDAC9-218ENST00000456174 FAM135AQ9P2D6 1515 aa10.44□□□□□ -0.74
HDAC9-218ENST00000456174 CD109Q6YHK3 1445 aa10.44□□□□□ -0.74
HDAC9-218ENST00000456174 ERBINQ96RT1 1412 aa10.44□□□□□ -0.74
HDAC9-218ENST00000456174 INO80Q9ULG1 1556 aaPredicted RBP10.43□□□□□ -0.74
HDAC9-218ENST00000456174 L3MBTL2Q969R5 705 aa10.43□□□□□ -0.74
HDAC9-218ENST00000456174 ATP7AQ04656 1500 aa10.43□□□□□ -0.74
HDAC9-218ENST00000456174 IQGAP3Q86VI3 1631 aa10.42□□□□□ -0.74
HDAC9-218ENST00000456174 WASHC2AQ641Q2 1341 aa10.42□□□□□ -0.74
HDAC9-218ENST00000456174 TEX14Q8IWB6 1497 aa10.41□□□□□ -0.74
HDAC9-218ENST00000456174 NBR1Q14596 966 aa10.41□□□□□ -0.74
HDAC9-218ENST00000456174 RTL5Q5HYW3 569 aaPredicted RBP10.41□□□□□ -0.74
HDAC9-218ENST00000456174 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.41□□□□□ -0.74
HDAC9-218ENST00000456174 MAGI2Q86UL8 1455 aa10.4□□□□□ -0.74
HDAC9-218ENST00000456174 KIDINS220Q9ULH0 1771 aa10.39□□□□□ -0.75
HDAC9-218ENST00000456174 ZNF518AQ6AHZ1 1483 aa10.39□□□□□ -0.75
HDAC9-218ENST00000456174 WASHC2CQ9Y4E1 1318 aa10.39□□□□□ -0.75
HDAC9-218ENST00000456174 MAP3K4Q9Y6R4 1608 aa10.39□□□□□ -0.75
HDAC9-218ENST00000456174 GLIPR1L2Q4G1C9 344 aa10.39□□□□□ -0.75
HDAC9-218ENST00000456174 RSPH6AQ9H0K4 717 aa10.38□□□□□ -0.75
HDAC9-218ENST00000456174 DEPDC5O75140 1603 aa10.37□□□□□ -0.75
HDAC9-218ENST00000456174 GLI2P10070 1586 aa10.37□□□□□ -0.75
HDAC9-218ENST00000456174 PAK3O75914 559 aaPredicted RBP10.37□□□□□ -0.75
HDAC9-218ENST00000456174 HIRIP3Q9BW71 556 aaPredicted RBP10.37□□□□□ -0.75
HDAC9-218ENST00000456174 NEO1Q92859 1461 aa10.37□□□□□ -0.75
HDAC9-218ENST00000456174 EIF2AK4Q9P2K8 1649 aaKnown RBP10.37□□□□□ -0.75
HDAC9-218ENST00000456174 POGZQ7Z3K3 1410 aa10.36□□□□□ -0.75
HDAC9-218ENST00000456174 KDM5CP41229 1560 aa10.36□□□□□ -0.75
HDAC9-218ENST00000456174 NBPF8Q3BBV2 869 aa10.35□□□□□ -0.75
HDAC9-218ENST00000456174 DHX29Q7Z478 1369 aaKnown RBP10.35□□□□□ -0.75
HDAC9-218ENST00000456174 HECW2Q9P2P5 1572 aa10.34□□□□□ -0.75
HDAC9-218ENST00000456174 E9PCH4 1651 aa10.34□□□□□ -0.75
HDAC9-218ENST00000456174 ZMYND15Q9H091 742 aa10.34□□□□□ -0.75
HDAC9-218ENST00000456174 DIP2BQ9P265 1576 aa10.33□□□□□ -0.76
HDAC9-218ENST00000456174 PLA2R1Q13018 1463 aa10.33□□□□□ -0.76
HDAC9-218ENST00000456174 CCDC144AA2RUR9 1427 aa10.33□□□□□ -0.76
HDAC9-218ENST00000456174 MLH3Q9UHC1 1453 aa10.33□□□□□ -0.76
HDAC9-218ENST00000456174 TET3O43151 1660 aa10.33□□□□□ -0.76
HDAC9-218ENST00000456174 KIF3BO15066 747 aa10.33□□□□□ -0.76
HDAC9-218ENST00000456174 RICTORQ6R327 1708 aa10.32□□□□□ -0.76
HDAC9-218ENST00000456174 EIF4G2P78344 907 aaKnown RBP eCLIP10.32□□□□□ -0.76
HDAC9-218ENST00000456174 ATP10AO60312 1499 aa10.32□□□□□ -0.76
HDAC9-218ENST00000456174 TSPOAP1O95153 1857 aa10.32□□□□□ -0.76
HDAC9-218ENST00000456174 KANK1Q14678 1352 aa10.32□□□□□ -0.76
HDAC9-218ENST00000456174 VWDEQ8N2E2 1590 aa10.32□□□□□ -0.76
HDAC9-218ENST00000456174 HSPA5P11021 654 aaKnown RBP10.32□□□□□ -0.76
HDAC9-218ENST00000456174 FAM69CQ0P6D2 419 aa10.32□□□□□ -0.76
HDAC9-218ENST00000456174 A2MP01023 1474 aa10.31□□□□□ -0.76
HDAC9-218ENST00000456174 MROH1Q8NDA8 1641 aa10.31□□□□□ -0.76
HDAC9-218ENST00000456174 PRDM15P57071 1507 aaPredicted RBP10.31□□□□□ -0.76
HDAC9-218ENST00000456174 DDX10Q13206 875 aaKnown RBP10.31□□□□□ -0.76
HDAC9-218ENST00000456174 ABCA6Q8N139 1617 aa10.31□□□□□ -0.76
HDAC9-218ENST00000456174 RAPGEF3O95398 923 aa10.3□□□□□ -0.76
HDAC9-218ENST00000456174 ZNF326Q5BKZ1 582 aaKnown RBP10.3□□□□□ -0.76
HDAC9-218ENST00000456174 FOXD4L1Q9NU39 408 aa10.3□□□□□ -0.76
HDAC9-218ENST00000456174 USP35Q9P2H5 1018 aa10.3□□□□□ -0.76
HDAC9-218ENST00000456174 SPHKAPQ2M3C7 1700 aa10.3□□□□□ -0.76
HDAC9-218ENST00000456174 UHRF1BP1Q6BDS2 1440 aa10.3□□□□□ -0.76
HDAC9-218ENST00000456174 RNF17Q9BXT8 1623 aaKnown RBP10.3□□□□□ -0.76
HDAC9-218ENST00000456174 FRMPD1Q5SYB0 1578 aa10.29□□□□□ -0.76
HDAC9-218ENST00000456174 CCER2I3L3R5 266 aa10.29□□□□□ -0.76
HDAC9-218ENST00000456174 DCAF11Q8TEB1 546 aa10.29□□□□□ -0.76
HDAC9-218ENST00000456174 PPRC1Q5VV67 1664 aaKnown RBP10.29□□□□□ -0.76
HDAC9-218ENST00000456174 CEP152O94986 1710 aa10.28□□□□□ -0.76
HDAC9-218ENST00000456174 IPO9Q96P70 1041 aaKnown RBP10.28□□□□□ -0.76
HDAC9-218ENST00000456174 KDM2AQ9Y2K7 1162 aa10.28□□□□□ -0.76
HDAC9-218ENST00000456174 BCORL1Q5H9F3 1711 aa10.28□□□□□ -0.76
HDAC9-218ENST00000456174 TRPM2O94759 1503 aa10.27□□□□□ -0.76
HDAC9-218ENST00000456174 KIF13AQ9H1H9 1805 aa10.27□□□□□ -0.77
HDAC9-218ENST00000456174 CNKSR2Q8WXI2 1034 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms