RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 LMTK3Q96Q04 1460 aa14.21□□□□□ -0.13
CHCHD4P3-201ENST00000455954 SETD5Q9C0A6 1442 aa14.21□□□□□ -0.13
CHCHD4P3-201ENST00000455954 GGT6Q6P531 493 aa14.2□□□□□ -0.14
CHCHD4P3-201ENST00000455954 ANP32EQ9BTT0 268 aa14.2□□□□□ -0.14
CHCHD4P3-201ENST00000455954 PPP6R1Q9UPN7 881 aa14.2□□□□□ -0.14
CHCHD4P3-201ENST00000455954 RAB3GAP2Q9H2M9 1393 aa14.2□□□□□ -0.14
CHCHD4P3-201ENST00000455954 MAST1Q9Y2H9 1570 aa14.17□□□□□ -0.14
CHCHD4P3-201ENST00000455954 FGD6Q6ZV73 1430 aa14.17□□□□□ -0.14
CHCHD4P3-201ENST00000455954 PTPN23Q9H3S7 1636 aa14.17□□□□□ -0.14
CHCHD4P3-201ENST00000455954 KIF3BO15066 747 aa14.17□□□□□ -0.14
CHCHD4P3-201ENST00000455954 ZMYM3Q14202 1370 aa14.16□□□□□ -0.14
CHCHD4P3-201ENST00000455954 C3P01024 1663 aa14.16□□□□□ -0.14
CHCHD4P3-201ENST00000455954 TCOF1Q13428 1488 aaKnown RBP14.15□□□□□ -0.14
CHCHD4P3-201ENST00000455954 CCER2I3L3R5 266 aa14.15□□□□□ -0.14
CHCHD4P3-201ENST00000455954 HSPA2P54652 639 aa14.15□□□□□ -0.14
CHCHD4P3-201ENST00000455954 MROH2AA6NES4 1674 aa14.14□□□□□ -0.15
CHCHD4P3-201ENST00000455954 PREX1Q8TCU6 1659 aa14.14□□□□□ -0.15
CHCHD4P3-201ENST00000455954 ABCC5O15440 1437 aa14.14□□□□□ -0.15
CHCHD4P3-201ENST00000455954 UHRF1BP1Q6BDS2 1440 aa14.13□□□□□ -0.15
CHCHD4P3-201ENST00000455954 CLTCQ00610 1675 aaKnown RBP14.13□□□□□ -0.15
CHCHD4P3-201ENST00000455954 DAPK1P53355 1430 aa14.12□□□□□ -0.15
CHCHD4P3-201ENST00000455954 NPATQ14207 1427 aa14.12□□□□□ -0.15
CHCHD4P3-201ENST00000455954 SETD1BQ9UPS6 1966 aaKnown RBP14.12□□□□□ -0.15
CHCHD4P3-201ENST00000455954 SHANK2Q9UPX8 1470 aa14.12□□□□□ -0.15
CHCHD4P3-201ENST00000455954 DNMT1P26358 1616 aaKnown RBP14.1□□□□□ -0.15
CHCHD4P3-201ENST00000455954 WASHC2CQ9Y4E1 1318 aa14.1□□□□□ -0.15
CHCHD4P3-201ENST00000455954 FAM50AQ14320 339 aaKnown RBP14.09□□□□□ -0.15
CHCHD4P3-201ENST00000455954 CROCC2H7BZ55 1655 aa14.09□□□□□ -0.15
CHCHD4P3-201ENST00000455954 DUOX2Q9NRD8 1548 aa14.09□□□□□ -0.15
CHCHD4P3-201ENST00000455954 FAM135AQ9P2D6 1515 aa14.09□□□□□ -0.15
CHCHD4P3-201ENST00000455954 PTPRKQ15262 1439 aa14.08□□□□□ -0.15
CHCHD4P3-201ENST00000455954 RRP7BPQ9NSQ0 103 aa14.08□□□□□ -0.16
CHCHD4P3-201ENST00000455954 KIF15Q9NS87 1388 aa14.08□□□□□ -0.16
CHCHD4P3-201ENST00000455954 EIF2AK4Q9P2K8 1649 aaKnown RBP14.08□□□□□ -0.16
CHCHD4P3-201ENST00000455954 KDM5DQ9BY66 1539 aa14.07□□□□□ -0.16
CHCHD4P3-201ENST00000455954 ANKRD30AQ9BXX3 1397 aa14.07□□□□□ -0.16
CHCHD4P3-201ENST00000455954 PPP1R15AO75807 674 aaPredicted RBP14.06□□□□□ -0.16
CHCHD4P3-201ENST00000455954 NEFLP07196 543 aa14.06□□□□□ -0.16
CHCHD4P3-201ENST00000455954 CHIC2Q9UKJ5 165 aa14.06□□□□□ -0.16
CHCHD4P3-201ENST00000455954 RNF17Q9BXT8 1623 aaKnown RBP14.05□□□□□ -0.16
CHCHD4P3-201ENST00000455954 ERBINQ96RT1 1412 aa14.05□□□□□ -0.16
CHCHD4P3-201ENST00000455954 DMRT2Q9Y5R5 561 aa14.03□□□□□ -0.16
CHCHD4P3-201ENST00000455954 NCOA1Q15788 1441 aa14.03□□□□□ -0.16
CHCHD4P3-201ENST00000455954 PZPP20742 1482 aa14.03□□□□□ -0.16
CHCHD4P3-201ENST00000455954 FBXO31Q5XUX0 539 aaPredicted RBP14.02□□□□□ -0.17
CHCHD4P3-201ENST00000455954 ABCC3O15438 1527 aa14.01□□□□□ -0.17
CHCHD4P3-201ENST00000455954 ADGRL2O95490 1459 aa14.01□□□□□ -0.17
CHCHD4P3-201ENST00000455954 ZC3H13Q5T200 1668 aaKnown RBP14.01□□□□□ -0.17
CHCHD4P3-201ENST00000455954 MROH1Q8NDA8 1641 aa14.01□□□□□ -0.17
CHCHD4P3-201ENST00000455954 TNRQ92752 1358 aa14□□□□□ -0.17
CHCHD4P3-201ENST00000455954 MYO3AQ8NEV4 1616 aa14□□□□□ -0.17
CHCHD4P3-201ENST00000455954 STRCQ7RTU9 1775 aa13.99□□□□□ -0.17
CHCHD4P3-201ENST00000455954 CEP170BQ9Y4F5 1589 aaPredicted RBP13.98□□□□□ -0.17
CHCHD4P3-201ENST00000455954 ANP32CO43423 234 aa13.98□□□□□ -0.17
CHCHD4P3-201ENST00000455954 FKBP8Q14318 412 aa13.98□□□□□ -0.17
CHCHD4P3-201ENST00000455954 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.98□□□□□ -0.17
CHCHD4P3-201ENST00000455954 PRDM15P57071 1507 aaPredicted RBP13.98□□□□□ -0.17
CHCHD4P3-201ENST00000455954 ZNF142P52746 1687 aaPredicted RBP13.98□□□□□ -0.17
CHCHD4P3-201ENST00000455954 KANK1Q14678 1352 aa13.97□□□□□ -0.17
CHCHD4P3-201ENST00000455954 CAMSAP1Q5T5Y3 1602 aa13.97□□□□□ -0.17
CHCHD4P3-201ENST00000455954 ERICH6BQ5W0A0 696 aa13.97□□□□□ -0.17
CHCHD4P3-201ENST00000455954 A2ML1A8K2U0 1454 aa13.97□□□□□ -0.17
CHCHD4P3-201ENST00000455954 DEPDC5O75140 1603 aa13.96□□□□□ -0.17
CHCHD4P3-201ENST00000455954 PTPRTO14522 1441 aa13.96□□□□□ -0.18
CHCHD4P3-201ENST00000455954 ANKRD50Q9ULJ7 1429 aa13.96□□□□□ -0.18
CHCHD4P3-201ENST00000455954 PKD2Q13563 968 aa13.95□□□□□ -0.18
CHCHD4P3-201ENST00000455954 HFM1A2PYH4 1435 aa13.95□□□□□ -0.18
CHCHD4P3-201ENST00000455954 CEP152O94986 1710 aa13.95□□□□□ -0.18
CHCHD4P3-201ENST00000455954 ROCK1Q13464 1354 aa13.95□□□□□ -0.18
CHCHD4P3-201ENST00000455954 GCC2Q8IWJ2 1684 aa13.95□□□□□ -0.18
CHCHD4P3-201ENST00000455954 PLA2R1Q13018 1463 aa13.94□□□□□ -0.18
CHCHD4P3-201ENST00000455954 NLRP1Q9C000 1473 aa13.94□□□□□ -0.18
CHCHD4P3-201ENST00000455954 ITGAEP38570 1179 aa13.94□□□□□ -0.18
CHCHD4P3-201ENST00000455954 DDX10Q13206 875 aaKnown RBP13.94□□□□□ -0.18
CHCHD4P3-201ENST00000455954 ARHGAP31Q2M1Z3 1444 aa13.94□□□□□ -0.18
CHCHD4P3-201ENST00000455954 NCKAP5LQ9HCH0 1330 aa13.93□□□□□ -0.18
CHCHD4P3-201ENST00000455954 SPATA31D1Q6ZQQ2 1576 aa13.93□□□□□ -0.18
CHCHD4P3-201ENST00000455954 ILDR1Q86SU0 546 aaPredicted RBP13.93□□□□□ -0.18
CHCHD4P3-201ENST00000455954 THEMISQ8N1K5 641 aaPredicted RBP13.93□□□□□ -0.18
CHCHD4P3-201ENST00000455954 ERVK-7P63135 1459 aa13.93□□□□□ -0.18
CHCHD4P3-201ENST00000455954 VWDEQ8N2E2 1590 aa13.92□□□□□ -0.18
CHCHD4P3-201ENST00000455954 LMTK2Q8IWU2 1503 aa13.91□□□□□ -0.18
CHCHD4P3-201ENST00000455954 RBM19Q9Y4C8 960 aaKnown RBP13.91□□□□□ -0.18
CHCHD4P3-201ENST00000455954 POLR1AO95602 1720 aaPredicted RBP13.9□□□□□ -0.18
CHCHD4P3-201ENST00000455954 TONSLQ96HA7 1378 aa13.9□□□□□ -0.18
CHCHD4P3-201ENST00000455954 FANCIQ9NVI1 1328 aa13.9□□□□□ -0.19
CHCHD4P3-201ENST00000455954 UGGT1Q9NYU2 1555 aa13.89□□□□□ -0.19
CHCHD4P3-201ENST00000455954 CERKQ8TCT0 537 aa13.89□□□□□ -0.19
CHCHD4P3-201ENST00000455954 ANKLE2Q86XL3 938 aa13.88□□□□□ -0.19
CHCHD4P3-201ENST00000455954 FBXO41Q8TF61 875 aa13.88□□□□□ -0.19
CHCHD4P3-201ENST00000455954 SIN3AQ96ST3 1273 aa13.88□□□□□ -0.19
CHCHD4P3-201ENST00000455954 CFAP65Q6ZU64 1925 aaKnown RBP13.86□□□□□ -0.19
CHCHD4P3-201ENST00000455954 EFCAB6Q5THR3 1501 aa13.85□□□□□ -0.19
CHCHD4P3-201ENST00000455954 UNC13BO14795 1591 aa13.85□□□□□ -0.19
CHCHD4P3-201ENST00000455954 BCANQ96GW7 911 aa13.84□□□□□ -0.19
CHCHD4P3-201ENST00000455954 BCL11AQ9H165 835 aa13.84□□□□□ -0.19
CHCHD4P3-201ENST00000455954 RPRD2Q5VT52 1461 aaKnown RBP13.84□□□□□ -0.19
CHCHD4P3-201ENST00000455954 NAIPQ13075 1403 aa13.83□□□□□ -0.2
CHCHD4P3-201ENST00000455954 NOS1P29475 1434 aa13.82□□□□□ -0.2
CHCHD4P3-201ENST00000455954 TET3O43151 1660 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms