RNA–Protein interactions for RNA: ENST00000455730.2

LDHBP1-201, Transcript of lactate dehydrogenase B pseudogene 1, humanhuman

BASIC

Gene LDHBP1, Length 1,119 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHBP1-201ENST00000455730 ADGBQ8N7X0 1667 aa22.88■■□□□ 1.25
LDHBP1-201ENST00000455730 ANKLE2Q86XL3 938 aa22.88■■□□□ 1.25
LDHBP1-201ENST00000455730 RGS17Q9UGC6 210 aaPredicted RBP22.88■■□□□ 1.25
LDHBP1-201ENST00000455730 PLEKHH2Q8IVE3 1493 aa22.86■■□□□ 1.25
LDHBP1-201ENST00000455730 FBXO31Q5XUX0 539 aaPredicted RBP22.86■■□□□ 1.25
LDHBP1-201ENST00000455730 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.86■■□□□ 1.25
LDHBP1-201ENST00000455730 NPHP4O75161 1426 aaPredicted RBP22.84■■□□□ 1.25
LDHBP1-201ENST00000455730 MED14O60244 1454 aa22.82■■□□□ 1.24
LDHBP1-201ENST00000455730 CFDP1Q9UEE9 299 aaPredicted RBP22.82■■□□□ 1.24
LDHBP1-201ENST00000455730 STRCP1A6NGW2 1772 aa22.81■■□□□ 1.24
LDHBP1-201ENST00000455730 PZPP20742 1482 aa22.81■■□□□ 1.24
LDHBP1-201ENST00000455730 DEPDC5O75140 1603 aa22.81■■□□□ 1.24
LDHBP1-201ENST00000455730 RNF17Q9BXT8 1623 aaKnown RBP22.81■■□□□ 1.24
LDHBP1-201ENST00000455730 LRRC7Q96NW7 1537 aa22.81■■□□□ 1.24
LDHBP1-201ENST00000455730 THEMISQ8N1K5 641 aaPredicted RBP22.8■■□□□ 1.24
LDHBP1-201ENST00000455730 IQGAP1P46940 1657 aa22.79■■□□□ 1.24
LDHBP1-201ENST00000455730 UGGT1Q9NYU2 1555 aa22.77■■□□□ 1.24
LDHBP1-201ENST00000455730 SYNMO15061 1565 aa22.76■■□□□ 1.23
LDHBP1-201ENST00000455730 KDM5DQ9BY66 1539 aa22.76■■□□□ 1.23
LDHBP1-201ENST00000455730 FAM135AQ9P2D6 1515 aa22.76■■□□□ 1.23
LDHBP1-201ENST00000455730 CCNB3Q8WWL7 1395 aa22.76■■□□□ 1.23
LDHBP1-201ENST00000455730 FYCO1Q9BQS8 1478 aa22.75■■□□□ 1.23
LDHBP1-201ENST00000455730 NLRP1Q9C000 1473 aa22.75■■□□□ 1.23
LDHBP1-201ENST00000455730 DHX29Q7Z478 1369 aaKnown RBP22.75■■□□□ 1.23
LDHBP1-201ENST00000455730 MIA2Q96PC5 1412 aa22.74■■□□□ 1.23
LDHBP1-201ENST00000455730 KIF3BO15066 747 aa22.73■■□□□ 1.23
LDHBP1-201ENST00000455730 POTEAQ6S8J7 498 aa22.71■■□□□ 1.23
LDHBP1-201ENST00000455730 ZNF644Q9H582 1327 aaPredicted RBP22.71■■□□□ 1.23
LDHBP1-201ENST00000455730 RTEL1-TNFRSF6BF6WH68 1400 aa22.71■■□□□ 1.23
LDHBP1-201ENST00000455730 WASHC2CQ9Y4E1 1318 aa22.7■■□□□ 1.22
LDHBP1-201ENST00000455730 MBD5Q9P267 1494 aa22.7■■□□□ 1.22
LDHBP1-201ENST00000455730 ZC3H13Q5T200 1668 aaKnown RBP22.64■■□□□ 1.21
LDHBP1-201ENST00000455730 TIAM1Q13009 1591 aa22.62■■□□□ 1.21
LDHBP1-201ENST00000455730 SETD1AO15047 1707 aaKnown RBP22.62■■□□□ 1.21
LDHBP1-201ENST00000455730 XIRP1Q702N8 1843 aaKnown RBP22.61■■□□□ 1.21
LDHBP1-201ENST00000455730 MTUS2Q5JR59 1369 aa22.61■■□□□ 1.21
LDHBP1-201ENST00000455730 FAM135BQ49AJ0 1406 aa22.57■■□□□ 1.2
LDHBP1-201ENST00000455730 CCDC141Q6ZP82 1450 aa22.56■■□□□ 1.2
LDHBP1-201ENST00000455730 SCAF11Q99590 1463 aaKnown RBP22.55■■□□□ 1.2
LDHBP1-201ENST00000455730 UBR1Q8IWV7 1749 aa22.53■■□□□ 1.2
LDHBP1-201ENST00000455730 ERVK-7P63135 1459 aa22.53■■□□□ 1.2
LDHBP1-201ENST00000455730 ABCC3O15438 1527 aa22.52■■□□□ 1.19
LDHBP1-201ENST00000455730 LTKP29376 864 aa22.5■■□□□ 1.19
LDHBP1-201ENST00000455730 ROBO1Q9Y6N7 1651 aa22.49■■□□□ 1.19
LDHBP1-201ENST00000455730 CFAP65Q6ZU64 1925 aaKnown RBP22.49■■□□□ 1.19
LDHBP1-201ENST00000455730 NCOA2Q15596 1464 aa22.48■■□□□ 1.19
LDHBP1-201ENST00000455730 EHBP1L1Q8N3D4 1523 aa22.48■■□□□ 1.19
LDHBP1-201ENST00000455730 TXNDC2Q86VQ3 553 aa22.48■■□□□ 1.19
LDHBP1-201ENST00000455730 CAMSAP2Q08AD1 1489 aa22.47■■□□□ 1.19
LDHBP1-201ENST00000455730 ARHGAP23Q9P227 1491 aa22.47■■□□□ 1.19
LDHBP1-201ENST00000455730 RSPH4AQ5TD94 716 aa22.46■■□□□ 1.19
LDHBP1-201ENST00000455730 CEP162Q5TB80 1403 aa22.46■■□□□ 1.19
LDHBP1-201ENST00000455730 SLIT1O75093 1534 aa22.46■■□□□ 1.19
LDHBP1-201ENST00000455730 TMEM94Q12767 1356 aa22.45■■□□□ 1.18
LDHBP1-201ENST00000455730 UPF1Q92900 1129 aaKnown RBP eCLIP22.42■■□□□ 1.18
LDHBP1-201ENST00000455730 CEP152O94986 1710 aa22.4■■□□□ 1.18
LDHBP1-201ENST00000455730 TSPY4P0CV99 314 aa22.4■■□□□ 1.18
LDHBP1-201ENST00000455730 TSPY10P0CW01 314 aa22.4■■□□□ 1.18
LDHBP1-201ENST00000455730 EID1Q9Y6B2 187 aa22.4■■□□□ 1.18
LDHBP1-201ENST00000455730 MAP3K1Q13233 1512 aa22.4■■□□□ 1.18
LDHBP1-201ENST00000455730 ARHGEF5Q12774 1597 aa22.39■■□□□ 1.18
LDHBP1-201ENST00000455730 MROH1Q8NDA8 1641 aa22.39■■□□□ 1.17
LDHBP1-201ENST00000455730 RBM33Q96EV2 1170 aaKnown RBP22.38■■□□□ 1.17
LDHBP1-201ENST00000455730 LRRC9Q6ZRR7 1453 aa22.38■■□□□ 1.17
LDHBP1-201ENST00000455730 PHLPP1O60346 1717 aa22.37■■□□□ 1.17
LDHBP1-201ENST00000455730 JCADQ9P266 1359 aa22.37■■□□□ 1.17
LDHBP1-201ENST00000455730 EIF2AK4Q9P2K8 1649 aaKnown RBP22.36■■□□□ 1.17
LDHBP1-201ENST00000455730 KCNA6P17658 529 aa22.35■■□□□ 1.17
LDHBP1-201ENST00000455730 PROSER2Q86WR7 435 aaPredicted RBP22.35■■□□□ 1.17
LDHBP1-201ENST00000455730 TRIM52Q96A61 297 aa22.33■■□□□ 1.17
LDHBP1-201ENST00000455730 TMEM2Q9UHN6 1383 aa22.33■■□□□ 1.17
LDHBP1-201ENST00000455730 PRDM15P57071 1507 aaPredicted RBP22.31■■□□□ 1.16
LDHBP1-201ENST00000455730 PIK3C2BO00750 1634 aa22.31■■□□□ 1.16
LDHBP1-201ENST00000455730 MAST1Q9Y2H9 1570 aa22.3■■□□□ 1.16
LDHBP1-201ENST00000455730 MSH6P52701 1360 aa22.29■■□□□ 1.16
LDHBP1-201ENST00000455730 LRP6O75581 1613 aa22.29■■□□□ 1.16
LDHBP1-201ENST00000455730 SLC26A8Q96RN1 970 aa22.29■■□□□ 1.16
LDHBP1-201ENST00000455730 ZNF772Q68DY9 489 aaPredicted RBP22.28■■□□□ 1.16
LDHBP1-201ENST00000455730 SLAIN2Q9P270 581 aa22.28■■□□□ 1.16
LDHBP1-201ENST00000455730 ARHGAP31Q2M1Z3 1444 aa22.28■■□□□ 1.16
LDHBP1-201ENST00000455730 NKTRP30414 1462 aaKnown RBP22.28■■□□□ 1.16
LDHBP1-201ENST00000455730 COL16A1Q07092 1604 aaPredicted RBP22.28■■□□□ 1.16
LDHBP1-201ENST00000455730 STAG3Q9UJ98 1225 aa22.27■■□□□ 1.16
LDHBP1-201ENST00000455730 TET3O43151 1660 aa22.26■■□□□ 1.15
LDHBP1-201ENST00000455730 NWD1Q149M9 1564 aa22.26■■□□□ 1.15
LDHBP1-201ENST00000455730 MEX3CQ5U5Q3 659 aaKnown RBP22.26■■□□□ 1.15
LDHBP1-201ENST00000455730 EFCAB6Q5THR3 1501 aa22.24■■□□□ 1.15
LDHBP1-201ENST00000455730 SPATA31A6Q5VVP1 1343 aa22.24■■□□□ 1.15
LDHBP1-201ENST00000455730 KDM5AP29375 1690 aaKnown RBP22.22■■□□□ 1.15
LDHBP1-201ENST00000455730 FGD6Q6ZV73 1430 aa22.22■■□□□ 1.15
LDHBP1-201ENST00000455730 DUOX2Q9NRD8 1548 aa22.21■■□□□ 1.15
LDHBP1-201ENST00000455730 RXRBP28702 533 aa22.2■■□□□ 1.14
LDHBP1-201ENST00000455730 IDI1Q13907 227 aa22.18■■□□□ 1.14
LDHBP1-201ENST00000455730 SRCAPQ6ZRS2 3230 aa22.17■■□□□ 1.14
LDHBP1-201ENST00000455730 CDK12Q9NYV4 1490 aaPredicted RBP22.16■■□□□ 1.14
LDHBP1-201ENST00000455730 SHPRHQ149N8 1683 aa22.15■■□□□ 1.14
LDHBP1-201ENST00000455730 BCANQ96GW7 911 aa22.15■■□□□ 1.14
LDHBP1-201ENST00000455730 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.14■■□□□ 1.13
LDHBP1-201ENST00000455730 CHD2O14647 1828 aaKnown RBP22.12■■□□□ 1.13
LDHBP1-201ENST00000455730 AHDC1Q5TGY3 1603 aaPredicted RBP22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms