RNA–Protein interactions for RNA: ENST00000455656.1

TMEM56-202, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-202ENST00000455656 DUOX2Q9NRD8 1548 aa18.47■□□□□ 0.55
TMEM56-202ENST00000455656 NPATQ14207 1427 aa18.47■□□□□ 0.55
TMEM56-202ENST00000455656 STRCQ7RTU9 1775 aa18.46■□□□□ 0.55
TMEM56-202ENST00000455656 ESF1Q9H501 851 aaKnown RBP18.46■□□□□ 0.55
TMEM56-202ENST00000455656 PTPRKQ15262 1439 aa18.46■□□□□ 0.55
TMEM56-202ENST00000455656 UHRF1BP1Q6BDS2 1440 aa18.45■□□□□ 0.54
TMEM56-202ENST00000455656 MYO3AQ8NEV4 1616 aa18.45■□□□□ 0.54
TMEM56-202ENST00000455656 ZNF142P52746 1687 aaPredicted RBP18.44■□□□□ 0.54
TMEM56-202ENST00000455656 ZC3H13Q5T200 1668 aaKnown RBP18.44■□□□□ 0.54
TMEM56-202ENST00000455656 ADGRL2O95490 1459 aa18.43■□□□□ 0.54
TMEM56-202ENST00000455656 KIF15Q9NS87 1388 aa18.42■□□□□ 0.54
TMEM56-202ENST00000455656 DEPDC5O75140 1603 aa18.42■□□□□ 0.54
TMEM56-202ENST00000455656 CEP152O94986 1710 aa18.42■□□□□ 0.54
TMEM56-202ENST00000455656 ABCC3O15438 1527 aa18.41■□□□□ 0.54
TMEM56-202ENST00000455656 PRDM15P57071 1507 aaPredicted RBP18.4■□□□□ 0.54
TMEM56-202ENST00000455656 NCOA1Q15788 1441 aa18.4■□□□□ 0.54
TMEM56-202ENST00000455656 ERBINQ96RT1 1412 aa18.4■□□□□ 0.54
TMEM56-202ENST00000455656 PZPP20742 1482 aa18.39■□□□□ 0.54
TMEM56-202ENST00000455656 CEP170BQ9Y4F5 1589 aaPredicted RBP18.37■□□□□ 0.53
TMEM56-202ENST00000455656 CAMSAP1Q5T5Y3 1602 aa18.37■□□□□ 0.53
TMEM56-202ENST00000455656 PPARGC1BQ86YN6 1023 aaKnown RBP18.36■□□□□ 0.53
TMEM56-202ENST00000455656 RRP7BPQ9NSQ0 103 aa18.36■□□□□ 0.53
TMEM56-202ENST00000455656 ANKRD30AQ9BXX3 1397 aa18.35■□□□□ 0.53
TMEM56-202ENST00000455656 CHIC2Q9UKJ5 165 aa18.35■□□□□ 0.53
TMEM56-202ENST00000455656 VWDEQ8N2E2 1590 aa18.34■□□□□ 0.53
TMEM56-202ENST00000455656 WASHC2CQ9Y4E1 1318 aa18.34■□□□□ 0.53
TMEM56-202ENST00000455656 FAM50AQ14320 339 aaKnown RBP18.34■□□□□ 0.53
TMEM56-202ENST00000455656 FBXO31Q5XUX0 539 aaPredicted RBP18.33■□□□□ 0.52
TMEM56-202ENST00000455656 SPATA31D1Q6ZQQ2 1576 aa18.33■□□□□ 0.52
TMEM56-202ENST00000455656 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.31■□□□□ 0.52
TMEM56-202ENST00000455656 A2ML1A8K2U0 1454 aa18.31■□□□□ 0.52
TMEM56-202ENST00000455656 TNRQ92752 1358 aa18.3■□□□□ 0.52
TMEM56-202ENST00000455656 CFAP65Q6ZU64 1925 aaKnown RBP18.29■□□□□ 0.52
TMEM56-202ENST00000455656 LMTK2Q8IWU2 1503 aa18.28■□□□□ 0.52
TMEM56-202ENST00000455656 ERVK-7P63135 1459 aa18.28■□□□□ 0.52
TMEM56-202ENST00000455656 PLA2R1Q13018 1463 aa18.28■□□□□ 0.52
TMEM56-202ENST00000455656 RRBP1Q9P2E9 1410 aaKnown RBP18.28■□□□□ 0.52
TMEM56-202ENST00000455656 ARHGAP31Q2M1Z3 1444 aa18.27■□□□□ 0.52
TMEM56-202ENST00000455656 ROCK1Q13464 1354 aa18.26■□□□□ 0.51
TMEM56-202ENST00000455656 UNC13BO14795 1591 aa18.25■□□□□ 0.51
TMEM56-202ENST00000455656 PTPRTO14522 1441 aa18.25■□□□□ 0.51
TMEM56-202ENST00000455656 ANKRD50Q9ULJ7 1429 aa18.25■□□□□ 0.51
TMEM56-202ENST00000455656 NLRP1Q9C000 1473 aa18.24■□□□□ 0.51
TMEM56-202ENST00000455656 POLR1AO95602 1720 aaPredicted RBP18.23■□□□□ 0.51
TMEM56-202ENST00000455656 EFCAB6Q5THR3 1501 aa18.23■□□□□ 0.51
TMEM56-202ENST00000455656 NEURL4Q96JN8 1562 aa18.21■□□□□ 0.51
TMEM56-202ENST00000455656 UBR1Q8IWV7 1749 aa18.21■□□□□ 0.51
TMEM56-202ENST00000455656 UGGT1Q9NYU2 1555 aa18.21■□□□□ 0.51
TMEM56-202ENST00000455656 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.2■□□□□ 0.5
TMEM56-202ENST00000455656 TET3O43151 1660 aa18.19■□□□□ 0.5
TMEM56-202ENST00000455656 DMRT2Q9Y5R5 561 aa18.19■□□□□ 0.5
TMEM56-202ENST00000455656 NCKAP5LQ9HCH0 1330 aa18.19■□□□□ 0.5
TMEM56-202ENST00000455656 GCC2Q8IWJ2 1684 aa18.18■□□□□ 0.5
TMEM56-202ENST00000455656 KANK1Q14678 1352 aa18.18■□□□□ 0.5
TMEM56-202ENST00000455656 SYNMO15061 1565 aa18.18■□□□□ 0.5
TMEM56-202ENST00000455656 IQGAP3Q86VI3 1631 aa18.17■□□□□ 0.5
TMEM56-202ENST00000455656 LTBP4Q8N2S1 1624 aa18.17■□□□□ 0.5
TMEM56-202ENST00000455656 ILDR1Q86SU0 546 aaPredicted RBP18.17■□□□□ 0.5
TMEM56-202ENST00000455656 PIK3C2BO00750 1634 aa18.16■□□□□ 0.5
TMEM56-202ENST00000455656 NOS1P29475 1434 aa18.15■□□□□ 0.5
TMEM56-202ENST00000455656 ITGAEP38570 1179 aa18.15■□□□□ 0.5
TMEM56-202ENST00000455656 PKD2Q13563 968 aa18.15■□□□□ 0.5
TMEM56-202ENST00000455656 E9PCH4 1651 aa18.14■□□□□ 0.49
TMEM56-202ENST00000455656 KDM5AP29375 1690 aaKnown RBP18.14■□□□□ 0.49
TMEM56-202ENST00000455656 RPRD2Q5VT52 1461 aaKnown RBP18.12■□□□□ 0.49
TMEM56-202ENST00000455656 MED14O60244 1454 aa18.11■□□□□ 0.49
TMEM56-202ENST00000455656 ARHGAP23Q9P227 1491 aa18.11■□□□□ 0.49
TMEM56-202ENST00000455656 SLIT1O75093 1534 aa18.1■□□□□ 0.49
TMEM56-202ENST00000455656 NAIPQ13075 1403 aa18.1■□□□□ 0.49
TMEM56-202ENST00000455656 CERKQ8TCT0 537 aa18.1■□□□□ 0.49
TMEM56-202ENST00000455656 THEMISQ8N1K5 641 aaPredicted RBP18.09■□□□□ 0.49
TMEM56-202ENST00000455656 IQGAP1P46940 1657 aa18.09■□□□□ 0.49
TMEM56-202ENST00000455656 MYO5BQ9ULV0 1848 aa18.08■□□□□ 0.48
TMEM56-202ENST00000455656 FBXO41Q8TF61 875 aa18.07■□□□□ 0.48
TMEM56-202ENST00000455656 ADGRB3O60242 1522 aa18.06■□□□□ 0.48
TMEM56-202ENST00000455656 ZNF335Q9H4Z2 1342 aaPredicted RBP18.05■□□□□ 0.48
TMEM56-202ENST00000455656 IDI1Q13907 227 aa18.05■□□□□ 0.48
TMEM56-202ENST00000455656 HFM1A2PYH4 1435 aa18.05■□□□□ 0.48
TMEM56-202ENST00000455656 NPHP4O75161 1426 aaPredicted RBP18.05■□□□□ 0.48
TMEM56-202ENST00000455656 ANKLE2Q86XL3 938 aa18.04■□□□□ 0.48
TMEM56-202ENST00000455656 NUP155O75694 1391 aa18.04■□□□□ 0.48
TMEM56-202ENST00000455656 STRCP1A6NGW2 1772 aa18.03■□□□□ 0.48
TMEM56-202ENST00000455656 SCAF11Q99590 1463 aaKnown RBP18.02■□□□□ 0.48
TMEM56-202ENST00000455656 TMEM131LA2VDJ0 1609 aa18.02■□□□□ 0.48
TMEM56-202ENST00000455656 IQSEC2Q5JU85 1478 aa18.01■□□□□ 0.47
TMEM56-202ENST00000455656 SPHKAPQ2M3C7 1700 aa18.01■□□□□ 0.47
TMEM56-202ENST00000455656 LTKP29376 864 aa18■□□□□ 0.47
TMEM56-202ENST00000455656 TMEM2Q9UHN6 1383 aa18■□□□□ 0.47
TMEM56-202ENST00000455656 SLC52A1Q9NWF4 448 aa17.99■□□□□ 0.47
TMEM56-202ENST00000455656 ZFYVE9O95405 1425 aa17.96■□□□□ 0.47
TMEM56-202ENST00000455656 CPS1P31327 1500 aa17.95■□□□□ 0.46
TMEM56-202ENST00000455656 TXNDC2Q86VQ3 553 aa17.94■□□□□ 0.46
TMEM56-202ENST00000455656 CLTCL1P53675 1640 aa17.92■□□□□ 0.46
TMEM56-202ENST00000455656 STAG3Q9UJ98 1225 aa17.91■□□□□ 0.46
TMEM56-202ENST00000455656 TRPM2O94759 1503 aa17.91■□□□□ 0.46
TMEM56-202ENST00000455656 XIRP1Q702N8 1843 aaKnown RBP17.91■□□□□ 0.46
TMEM56-202ENST00000455656 EID1Q9Y6B2 187 aa17.89■□□□□ 0.45
TMEM56-202ENST00000455656 RIMS2Q9UQ26 1411 aa17.89■□□□□ 0.45
TMEM56-202ENST00000455656 LRRC7Q96NW7 1537 aa17.88■□□□□ 0.45
TMEM56-202ENST00000455656 ALKQ9UM73 1620 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms