RNA–Protein interactions for RNA: ENST00000455624.6

SCN5A-210, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 7,170 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-210ENST00000455624 KIF16BQ96L93 1317 aa12.59□□□□□ -0.39
SCN5A-210ENST00000455624 DEKP35659 375 aaKnown RBP12.59□□□□□ -0.39
SCN5A-210ENST00000455624 EVA1CP58658 441 aa12.59□□□□□ -0.39
SCN5A-210ENST00000455624 FOXD4L1Q9NU39 408 aa12.59□□□□□ -0.39
SCN5A-210ENST00000455624 TPD52L1Q16890 204 aaPredicted RBP12.58□□□□□ -0.39
SCN5A-210ENST00000455624 USP35Q9P2H5 1018 aa12.58□□□□□ -0.4
SCN5A-210ENST00000455624 TCEAL9Q9UHQ7 104 aa12.58□□□□□ -0.4
SCN5A-210ENST00000455624 EFCAB2Q5VUJ9 269 aa12.58□□□□□ -0.4
SCN5A-210ENST00000455624 TPM2P07951 284 aa12.57□□□□□ -0.4
SCN5A-210ENST00000455624 SLKQ9H2G2 1235 aaPredicted RBP12.57□□□□□ -0.4
SCN5A-210ENST00000455624 NOL10Q9BSC4 688 aaKnown RBP12.57□□□□□ -0.4
SCN5A-210ENST00000455624 C1orf141Q5JVX7 400 aa12.57□□□□□ -0.4
SCN5A-210ENST00000455624 TIMELESSQ9UNS1 1208 aa12.57□□□□□ -0.4
SCN5A-210ENST00000455624 AMOTL1Q8IY63 956 aa12.56□□□□□ -0.4
SCN5A-210ENST00000455624 TCERG1O14776 1098 aaKnown RBP12.56□□□□□ -0.4
SCN5A-210ENST00000455624 H3BQV1 296 aa12.56□□□□□ -0.4
SCN5A-210ENST00000455624 PES1O00541 588 aaKnown RBP12.56□□□□□ -0.4
SCN5A-210ENST00000455624 IFFO2Q5TF58 517 aa12.56□□□□□ -0.4
SCN5A-210ENST00000455624 KIF3BO15066 747 aa12.56□□□□□ -0.4
SCN5A-210ENST00000455624 PHF14O94880 888 aa12.56□□□□□ -0.4
SCN5A-210ENST00000455624 MPHOSPH9Q99550 1183 aa12.55□□□□□ -0.4
SCN5A-210ENST00000455624 GOLGA6L3A6NEY3 463 aa12.55□□□□□ -0.4
SCN5A-210ENST00000455624 SF3A1Q15459 793 aaKnown RBP12.55□□□□□ -0.4
SCN5A-210ENST00000455624 WASHC2CQ9Y4E1 1318 aa12.55□□□□□ -0.4
SCN5A-210ENST00000455624 TSHZ2Q9NRE2 1034 aa12.55□□□□□ -0.4
SCN5A-210ENST00000455624 AKAP17AQ02040 695 aaKnown RBP12.54□□□□□ -0.4
SCN5A-210ENST00000455624 KIF3AQ9Y496 699 aa12.54□□□□□ -0.4
SCN5A-210ENST00000455624 CENPJQ9HC77 1338 aaPredicted RBP12.54□□□□□ -0.4
SCN5A-210ENST00000455624 RAD21O60216 631 aa12.54□□□□□ -0.4
SCN5A-210ENST00000455624 FBXW7Q969H0 707 aa12.54□□□□□ -0.4
SCN5A-210ENST00000455624 ST18O60284 1047 aa12.53□□□□□ -0.4
SCN5A-210ENST00000455624 FOXD4L5Q5VV16 416 aaPredicted RBP12.53□□□□□ -0.4
SCN5A-210ENST00000455624 FOXD4L4Q8WXT5 416 aaPredicted RBP12.53□□□□□ -0.4
SCN5A-210ENST00000455624 PDS5BQ9NTI5 1447 aa12.53□□□□□ -0.4
SCN5A-210ENST00000455624 PRKCSHP14314 528 aaPredicted RBP12.53□□□□□ -0.4
SCN5A-210ENST00000455624 HNRNPMP52272 730 aaKnown RBP eCLIP12.53□□□□□ -0.4
SCN5A-210ENST00000455624 NUTM2FA1L443 756 aa12.52□□□□□ -0.4
SCN5A-210ENST00000455624 TNNT3P45378 269 aaPredicted RBP12.52□□□□□ -0.4
SCN5A-210ENST00000455624 CWC22Q9HCG8 908 aaKnown RBP12.52□□□□□ -0.41
SCN5A-210ENST00000455624 TSR1Q2NL82 804 aaKnown RBP12.52□□□□□ -0.41
SCN5A-210ENST00000455624 SOGA1O94964 1423 aa12.52□□□□□ -0.41
SCN5A-210ENST00000455624 SYNE3Q6ZMZ3 975 aa12.51□□□□□ -0.41
SCN5A-210ENST00000455624 FMN1Q68DA7 1419 aa12.51□□□□□ -0.41
SCN5A-210ENST00000455624 FAM184AQ8NB25 1140 aa12.51□□□□□ -0.41
SCN5A-210ENST00000455624 RILPL2Q969X0 211 aa12.51□□□□□ -0.41
SCN5A-210ENST00000455624 TTC5Q8N0Z6 440 aa12.49□□□□□ -0.41
SCN5A-210ENST00000455624 CLUAP1Q96AJ1 413 aa12.49□□□□□ -0.41
SCN5A-210ENST00000455624 WWC1Q8IX03 1113 aa12.49□□□□□ -0.41
SCN5A-210ENST00000455624 CHMP4CQ96CF2 233 aa12.49□□□□□ -0.41
SCN5A-210ENST00000455624 CNKSR2Q8WXI2 1034 aa12.49□□□□□ -0.41
SCN5A-210ENST00000455624 AEBP2Q6ZN18 517 aaPredicted RBP12.48□□□□□ -0.41
SCN5A-210ENST00000455624 UACAQ9BZF9 1416 aa12.48□□□□□ -0.41
SCN5A-210ENST00000455624 SETQ01105 290 aaPredicted RBP12.48□□□□□ -0.41
SCN5A-210ENST00000455624 COG3Q96JB2 828 aa12.48□□□□□ -0.41
SCN5A-210ENST00000455624 CCDC18Q5T9S5 1454 aa12.47□□□□□ -0.41
SCN5A-210ENST00000455624 TPM1P09493 284 aa12.47□□□□□ -0.41
SCN5A-210ENST00000455624 RBM19Q9Y4C8 960 aaKnown RBP12.47□□□□□ -0.41
SCN5A-210ENST00000455624 NGEFQ8N5V2 710 aa12.47□□□□□ -0.41
SCN5A-210ENST00000455624 PCMTD1Q96MG8 357 aaPredicted RBP12.47□□□□□ -0.41
SCN5A-210ENST00000455624 TRIM29Q14134 588 aa12.47□□□□□ -0.41
SCN5A-210ENST00000455624 PHLDB1Q86UU1 1377 aa12.46□□□□□ -0.41
SCN5A-210ENST00000455624 LRRFIP1Q32MZ4 808 aaKnown RBP12.46□□□□□ -0.41
SCN5A-210ENST00000455624 TRAK1Q9UPV9 953 aa12.46□□□□□ -0.41
SCN5A-210ENST00000455624 RAB3GAP2Q9H2M9 1393 aa12.46□□□□□ -0.41
SCN5A-210ENST00000455624 SMARCA2P51531 1590 aa12.46□□□□□ -0.41
SCN5A-210ENST00000455624 ABCC8Q09428 1581 aa12.46□□□□□ -0.41
SCN5A-210ENST00000455624 CCDC70Q6NSX1 233 aa12.46□□□□□ -0.42
SCN5A-210ENST00000455624 VPS8Q8N3P4 1428 aa12.46□□□□□ -0.42
SCN5A-210ENST00000455624 FBXO3Q9UK99 471 aa12.46□□□□□ -0.42
SCN5A-210ENST00000455624 KIF15Q9NS87 1388 aa12.46□□□□□ -0.42
SCN5A-210ENST00000455624 RRP7AQ9Y3A4 280 aaKnown RBP12.45□□□□□ -0.42
SCN5A-210ENST00000455624 VPS37DQ86XT2 251 aa12.45□□□□□ -0.42
SCN5A-210ENST00000455624 CCDC47Q96A33 483 aaKnown RBP12.45□□□□□ -0.42
SCN5A-210ENST00000455624 KLHL34Q8N239 644 aa12.45□□□□□ -0.42
SCN5A-210ENST00000455624 MCTP1Q6DN14 999 aa12.44□□□□□ -0.42
SCN5A-210ENST00000455624 DDX11L8A8MPP1 907 aa12.44□□□□□ -0.42
SCN5A-210ENST00000455624 GOLGA6L19H0YKK7 550 aa12.44□□□□□ -0.42
SCN5A-210ENST00000455624 DHX16O60231 1041 aaKnown RBP12.44□□□□□ -0.42
SCN5A-210ENST00000455624 ANO2Q9NQ90 1003 aa12.44□□□□□ -0.42
SCN5A-210ENST00000455624 NEXNQ0ZGT2 675 aa12.43□□□□□ -0.42
SCN5A-210ENST00000455624 DIAPH3Q9NSV4 1193 aa12.43□□□□□ -0.42
SCN5A-210ENST00000455624 ANKRD45Q5TZF3 282 aa12.43□□□□□ -0.42
SCN5A-210ENST00000455624 CCAR2Q8N163 923 aaKnown RBP12.42□□□□□ -0.42
SCN5A-210ENST00000455624 SYTL4Q96C24 671 aaPredicted RBP12.42□□□□□ -0.42
SCN5A-210ENST00000455624 CECR2Q9BXF3 1484 aa12.42□□□□□ -0.42
SCN5A-210ENST00000455624 EIF2S2P20042 333 aaKnown RBP12.42□□□□□ -0.42
SCN5A-210ENST00000455624 DCAF8L1A6NGE4 600 aa12.42□□□□□ -0.42
SCN5A-210ENST00000455624 KANK4Q5T7N3 995 aaPredicted RBP12.42□□□□□ -0.42
SCN5A-210ENST00000455624 APPP05067 770 aa12.41□□□□□ -0.42
SCN5A-210ENST00000455624 TEFQ10587 303 aa12.41□□□□□ -0.42
SCN5A-210ENST00000455624 EVC2Q86UK5 1308 aa12.41□□□□□ -0.42
SCN5A-210ENST00000455624 CCDC43Q96MW1 224 aaKnown RBP12.41□□□□□ -0.42
SCN5A-210ENST00000455624 PATL2C9JE40 543 aaKnown RBP12.41□□□□□ -0.42
SCN5A-210ENST00000455624 C9orf78Q9NZ63 289 aaPredicted RBP12.41□□□□□ -0.42
SCN5A-210ENST00000455624 NFXL1Q6ZNB6 911 aa12.4□□□□□ -0.42
SCN5A-210ENST00000455624 ATP6V1DQ9Y5K8 247 aa12.4□□□□□ -0.42
SCN5A-210ENST00000455624 CGNL1Q0VF96 1302 aa12.4□□□□□ -0.42
SCN5A-210ENST00000455624 ERICH2A1L162 156 aa12.4□□□□□ -0.42
SCN5A-210ENST00000455624 RSPH4AQ5TD94 716 aa12.4□□□□□ -0.42
SCN5A-210ENST00000455624 RUFY2Q8WXA3 655 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms