RNA–Protein interactions for RNA: ENST00000455403.1

SAMM50P1-201, Transcript of SAMM50 sorting and assembly machinery component pseudogene 1, humanhuman

BASIC

Gene SAMM50P1, Length 1,399 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50P1-201ENST00000455403 GPIHBP1Q8IV16 184 aa9.8□□□□□ -0.84
SAMM50P1-201ENST00000455403 SHROOM4Q9ULL8 1493 aa9.79□□□□□ -0.84
SAMM50P1-201ENST00000455403 KRI1Q8N9T8 703 aaKnown RBP9.79□□□□□ -0.84
SAMM50P1-201ENST00000455403 MLLT3P42568 568 aaPredicted RBP9.78□□□□□ -0.84
SAMM50P1-201ENST00000455403 PCDH10Q9P2E7 1040 aa9.78□□□□□ -0.84
SAMM50P1-201ENST00000455403 KDM4FA0A1W2PPD8 638 aa9.77□□□□□ -0.84
SAMM50P1-201ENST00000455403 ARID3CA6NKF2 412 aa9.77□□□□□ -0.84
SAMM50P1-201ENST00000455403 TRIM66O15016 1216 aa9.77□□□□□ -0.84
SAMM50P1-201ENST00000455403 EVI5O60447 810 aa9.77□□□□□ -0.84
SAMM50P1-201ENST00000455403 PDE4DQ08499 809 aa9.77□□□□□ -0.84
SAMM50P1-201ENST00000455403 ZNF710Q8N1W2 664 aa9.77□□□□□ -0.84
SAMM50P1-201ENST00000455403 ZNF316A6NFI3 1004 aaPredicted RBP9.76□□□□□ -0.85
SAMM50P1-201ENST00000455403 GPR153Q6NV75 609 aa9.76□□□□□ -0.85
SAMM50P1-201ENST00000455403 ANO8Q9HCE9 1232 aaPredicted RBP9.76□□□□□ -0.85
SAMM50P1-201ENST00000455403 PTGER2P43116 358 aa9.75□□□□□ -0.85
SAMM50P1-201ENST00000455403 HOXB1P14653 301 aaPredicted RBP9.73□□□□□ -0.85
SAMM50P1-201ENST00000455403 MYT1Q01538 1121 aa9.73□□□□□ -0.85
SAMM50P1-201ENST00000455403 ARSIQ5FYB1 569 aa9.73□□□□□ -0.85
SAMM50P1-201ENST00000455403 RIMBP3CA6NJZ7 1639 aa9.72□□□□□ -0.85
SAMM50P1-201ENST00000455403 RIMBP3BA6NNM3 1639 aa9.72□□□□□ -0.85
SAMM50P1-201ENST00000455403 RIMBP3Q9UFD9 1639 aa9.72□□□□□ -0.85
SAMM50P1-201ENST00000455403 FAM117AQ9C073 453 aa9.72□□□□□ -0.85
SAMM50P1-201ENST00000455403 NUDT7P0C024 238 aa9.71□□□□□ -0.86
SAMM50P1-201ENST00000455403 KHSRPQ92945 711 aaKnown RBP eCLIP9.71□□□□□ -0.86
SAMM50P1-201ENST00000455403 APBB1O00213 710 aa9.7□□□□□ -0.86
SAMM50P1-201ENST00000455403 PLEKHG3A1L390 1219 aa9.67□□□□□ -0.86
SAMM50P1-201ENST00000455403 DDX12PQ92771 950 aa9.67□□□□□ -0.86
SAMM50P1-201ENST00000455403 JPH4Q96JJ6 628 aa9.67□□□□□ -0.86
SAMM50P1-201ENST00000455403 ST18O60284 1047 aa9.66□□□□□ -0.86
SAMM50P1-201ENST00000455403 PHF14O94880 888 aa9.66□□□□□ -0.86
SAMM50P1-201ENST00000455403 CYB5RLQ6IPT4 315 aa9.66□□□□□ -0.86
SAMM50P1-201ENST00000455403 FBXO41Q8TF61 875 aa9.65□□□□□ -0.86
SAMM50P1-201ENST00000455403 GRXCR2A6NFK2 248 aa9.64□□□□□ -0.87
SAMM50P1-201ENST00000455403 GPR37O15354 613 aa9.64□□□□□ -0.87
SAMM50P1-201ENST00000455403 FOSBP53539 338 aa9.64□□□□□ -0.87
SAMM50P1-201ENST00000455403 BAZ1AQ9NRL2 1556 aaPredicted RBP9.64□□□□□ -0.87
SAMM50P1-201ENST00000455403 OSBPP22059 807 aa9.63□□□□□ -0.87
SAMM50P1-201ENST00000455403 FAM163AQ96GL9 167 aaPredicted RBP9.63□□□□□ -0.87
SAMM50P1-201ENST00000455403 EPAS1Q99814 870 aa9.63□□□□□ -0.87
SAMM50P1-201ENST00000455403 LHX6Q9UPM6 363 aa9.63□□□□□ -0.87
SAMM50P1-201ENST00000455403 PCDHGA10Q9Y5H3 936 aa9.63□□□□□ -0.87
SAMM50P1-201ENST00000455403 PSDA5PKW4 1024 aaPredicted RBP9.63□□□□□ -0.87
SAMM50P1-201ENST00000455403 ILDR2Q71H61 639 aa9.63□□□□□ -0.87
SAMM50P1-201ENST00000455403 PDIA4P13667 645 aaKnown RBP9.62□□□□□ -0.87
SAMM50P1-201ENST00000455403 LCE2DQ5TA82 110 aaPredicted RBP9.62□□□□□ -0.87
SAMM50P1-201ENST00000455403 NECTIN2Q92692 538 aa9.62□□□□□ -0.87
SAMM50P1-201ENST00000455403 FBXW7Q969H0 707 aa9.62□□□□□ -0.87
SAMM50P1-201ENST00000455403 EN1Q05925 392 aaPredicted RBP9.61□□□□□ -0.87
SAMM50P1-201ENST00000455403 TYW1BQ6NUM6 668 aa9.61□□□□□ -0.87
SAMM50P1-201ENST00000455403 ZNF454Q8N9F8 522 aa9.61□□□□□ -0.87
SAMM50P1-201ENST00000455403 ONECUT3O60422 494 aaPredicted RBP9.6□□□□□ -0.87
SAMM50P1-201ENST00000455403 PRIM1P49642 420 aaKnown RBP9.6□□□□□ -0.87
SAMM50P1-201ENST00000455403 FLIIQ13045 1269 aa9.6□□□□□ -0.87
SAMM50P1-201ENST00000455403 THOC2Q8NI27 1593 aaKnown RBP9.59□□□□□ -0.87
SAMM50P1-201ENST00000455403 ZBTB7CA1YPR0 619 aa9.59□□□□□ -0.87
SAMM50P1-201ENST00000455403 PPP4R3BQ5MIZ7 849 aa9.59□□□□□ -0.87
SAMM50P1-201ENST00000455403 CCDC82Q8N4S0 544 aa9.59□□□□□ -0.87
SAMM50P1-201ENST00000455403 DDRGK1Q96HY6 314 aa9.59□□□□□ -0.87
SAMM50P1-201ENST00000455403 EMP3P54852 163 aa9.58□□□□□ -0.88
SAMM50P1-201ENST00000455403 ZDHHC16Q969W1 377 aa9.58□□□□□ -0.88
SAMM50P1-201ENST00000455403 PARP9Q8IXQ6 854 aa9.57□□□□□ -0.88
SAMM50P1-201ENST00000455403 CCDC102AQ96A19 550 aa9.57□□□□□ -0.88
SAMM50P1-201ENST00000455403 CLUAP1Q96AJ1 413 aa9.57□□□□□ -0.88
SAMM50P1-201ENST00000455403 CCDC9Q9Y3X0 531 aaKnown RBP9.56□□□□□ -0.88
SAMM50P1-201ENST00000455403 ARHGEF11O15085 1522 aa9.56□□□□□ -0.88
SAMM50P1-201ENST00000455403 MARVELD3Q96A59 401 aa9.55□□□□□ -0.88
SAMM50P1-201ENST00000455403 MAP3K7O43318 606 aa9.54□□□□□ -0.88
SAMM50P1-201ENST00000455403 ADAM33Q9BZ11 813 aa9.54□□□□□ -0.88
SAMM50P1-201ENST00000455403 BCL2L12Q9HB09 334 aa9.54□□□□□ -0.88
SAMM50P1-201ENST00000455403 ERBB3P21860 1342 aa9.54□□□□□ -0.88
SAMM50P1-201ENST00000455403 TRAK2O60296 914 aa9.53□□□□□ -0.88
SAMM50P1-201ENST00000455403 AMHR2Q16671 573 aa9.53□□□□□ -0.88
SAMM50P1-201ENST00000455403 MINK1Q8N4C8 1332 aaPredicted RBP9.53□□□□□ -0.88
SAMM50P1-201ENST00000455403 A6NJR5 290 aa9.52□□□□□ -0.88
SAMM50P1-201ENST00000455403 MAP2K5Q13163 448 aa9.52□□□□□ -0.88
SAMM50P1-201ENST00000455403 VARS2Q5ST30 1063 aaKnown RBP9.52□□□□□ -0.88
SAMM50P1-201ENST00000455403 RBM33Q96EV2 1170 aaKnown RBP9.52□□□□□ -0.88
SAMM50P1-201ENST00000455403 TSR1Q2NL82 804 aaKnown RBP9.51□□□□□ -0.89
SAMM50P1-201ENST00000455403 CDHR5Q9HBB8 845 aa9.51□□□□□ -0.89
SAMM50P1-201ENST00000455403 C6orf132Q5T0Z8 1188 aa9.5□□□□□ -0.89
SAMM50P1-201ENST00000455403 DISP3Q9P2K9 1392 aa9.5□□□□□ -0.89
SAMM50P1-201ENST00000455403 NUTM2FA1L443 756 aa9.5□□□□□ -0.89
SAMM50P1-201ENST00000455403 FAM205CA6NFA0 338 aa9.5□□□□□ -0.89
SAMM50P1-201ENST00000455403 IRF6O14896 467 aa9.5□□□□□ -0.89
SAMM50P1-201ENST00000455403 PTGDRQ13258 359 aa9.5□□□□□ -0.89
SAMM50P1-201ENST00000455403 HS3ST6Q96QI5 342 aa9.5□□□□□ -0.89
SAMM50P1-201ENST00000455403 NESP48681 1621 aa9.49□□□□□ -0.89
SAMM50P1-201ENST00000455403 FCHSD2O94868 740 aa9.49□□□□□ -0.89
SAMM50P1-201ENST00000455403 PTPREP23469 700 aa9.48□□□□□ -0.89
SAMM50P1-201ENST00000455403 CERKQ8TCT0 537 aa9.48□□□□□ -0.89
SAMM50P1-201ENST00000455403 NPDC1Q9NQX5 325 aaPredicted RBP9.48□□□□□ -0.89
SAMM50P1-201ENST00000455403 POTEB3A0JP26 581 aa9.47□□□□□ -0.89
SAMM50P1-201ENST00000455403 HIC1Q14526 733 aa9.47□□□□□ -0.89
SAMM50P1-201ENST00000455403 POTEBQ6S5H4 581 aa9.47□□□□□ -0.89
SAMM50P1-201ENST00000455403 ZNF687Q8N1G0 1237 aa9.47□□□□□ -0.89
SAMM50P1-201ENST00000455403 GOPCQ9HD26 462 aa9.47□□□□□ -0.89
SAMM50P1-201ENST00000455403 SMARCA2P51531 1590 aa9.47□□□□□ -0.89
SAMM50P1-201ENST00000455403 PPP1R3GB7ZBB8 358 aa9.46□□□□□ -0.9
SAMM50P1-201ENST00000455403 FECHP22830 423 aa9.46□□□□□ -0.9
SAMM50P1-201ENST00000455403 PBX2P40425 430 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms