RNA–Protein interactions for RNA: ENST00000455214.1

PLXNB3-204, Transcript of plexin B3, humanhuman

TSL 3

Gene PLXNB3, Length 489 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-204ENST00000455214 ADAMTSL3P82987 1691 aa31.34■■■□□ 2.61
PLXNB3-204ENST00000455214 VWDEQ8N2E2 1590 aa31.33■■■□□ 2.61
PLXNB3-204ENST00000455214 FER1L4A9Z1Z3 1794 aa31.33■■■□□ 2.61
PLXNB3-204ENST00000455214 ZC3H13Q5T200 1668 aaKnown RBP31.32■■■□□ 2.6
PLXNB3-204ENST00000455214 KIF3BO15066 747 aa31.32■■■□□ 2.6
PLXNB3-204ENST00000455214 KDM5DQ9BY66 1539 aa31.3■■■□□ 2.6
PLXNB3-204ENST00000455214 CEP152O94986 1710 aa31.29■■■□□ 2.6
PLXNB3-204ENST00000455214 ARID4BQ4LE39 1312 aaPredicted RBP31.29■■■□□ 2.6
PLXNB3-204ENST00000455214 RAB3GAP2Q9H2M9 1393 aa31.29■■■□□ 2.6
PLXNB3-204ENST00000455214 IQGAP3Q86VI3 1631 aa31.28■■■□□ 2.6
PLXNB3-204ENST00000455214 MADDQ8WXG6 1647 aa31.26■■■□□ 2.59
PLXNB3-204ENST00000455214 CLTCQ00610 1675 aaKnown RBP31.24■■■□□ 2.59
PLXNB3-204ENST00000455214 MROH2AA6NES4 1674 aa31.23■■■□□ 2.59
PLXNB3-204ENST00000455214 ABCC3O15438 1527 aa31.23■■■□□ 2.59
PLXNB3-204ENST00000455214 LMTK2Q8IWU2 1503 aa31.22■■■□□ 2.59
PLXNB3-204ENST00000455214 PCGF6Q9BYE7 350 aa31.21■■■□□ 2.59
PLXNB3-204ENST00000455214 GGT6Q6P531 493 aa31.2■■■□□ 2.59
PLXNB3-204ENST00000455214 RIMS1Q86UR5 1692 aaKnown RBP31.19■■■□□ 2.58
PLXNB3-204ENST00000455214 PPP6R1Q9UPN7 881 aa31.19■■■□□ 2.58
PLXNB3-204ENST00000455214 CAMSAP1Q5T5Y3 1602 aa31.19■■■□□ 2.58
PLXNB3-204ENST00000455214 TET3O43151 1660 aa31.19■■■□□ 2.58
PLXNB3-204ENST00000455214 HRCP23327 699 aa31.18■■■□□ 2.58
PLXNB3-204ENST00000455214 MLECQ14165 292 aa31.18■■■□□ 2.58
PLXNB3-204ENST00000455214 KANK1Q14678 1352 aa31.16■■■□□ 2.58
PLXNB3-204ENST00000455214 CNTLNQ9NXG0 1405 aa31.15■■■□□ 2.58
PLXNB3-204ENST00000455214 ACIN1Q9UKV3 1341 aaKnown RBP31.15■■■□□ 2.58
PLXNB3-204ENST00000455214 PZPP20742 1482 aa31.14■■■□□ 2.57
PLXNB3-204ENST00000455214 EFCAB6Q5THR3 1501 aa31.14■■■□□ 2.57
PLXNB3-204ENST00000455214 NUP155O75694 1391 aa31.12■■■□□ 2.57
PLXNB3-204ENST00000455214 C3P01024 1663 aa31.1■■■□□ 2.57
PLXNB3-204ENST00000455214 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.1■■■□□ 2.57
PLXNB3-204ENST00000455214 E9PCH4 1651 aa31.09■■■□□ 2.57
PLXNB3-204ENST00000455214 WASHC2CQ9Y4E1 1318 aa31.06■■■□□ 2.56
PLXNB3-204ENST00000455214 ARHGAP31Q2M1Z3 1444 aa31.05■■■□□ 2.56
PLXNB3-204ENST00000455214 TRIM52Q96A61 297 aa31.03■■■□□ 2.56
PLXNB3-204ENST00000455214 PREX1Q8TCU6 1659 aa31■■■□□ 2.55
PLXNB3-204ENST00000455214 KDM4FA0A1W2PPD8 638 aa31■■■□□ 2.55
PLXNB3-204ENST00000455214 RPRD2Q5VT52 1461 aaKnown RBP31■■■□□ 2.55
PLXNB3-204ENST00000455214 NPATQ14207 1427 aa30.99■■■□□ 2.55
PLXNB3-204ENST00000455214 CFAP65Q6ZU64 1925 aaKnown RBP30.99■■■□□ 2.55
PLXNB3-204ENST00000455214 ESF1Q9H501 851 aaKnown RBP30.99■■■□□ 2.55
PLXNB3-204ENST00000455214 PTPRMP28827 1452 aa30.99■■■□□ 2.55
PLXNB3-204ENST00000455214 ZMYM3Q14202 1370 aa30.98■■■□□ 2.55
PLXNB3-204ENST00000455214 SPHKAPQ2M3C7 1700 aa30.95■■■□□ 2.55
PLXNB3-204ENST00000455214 SPATA31D1Q6ZQQ2 1576 aa30.95■■■□□ 2.54
PLXNB3-204ENST00000455214 ERVK-7P63135 1459 aa30.92■■■□□ 2.54
PLXNB3-204ENST00000455214 MPHOSPH9Q99550 1183 aa30.91■■■□□ 2.54
PLXNB3-204ENST00000455214 SLC4A1APQ9BWU0 796 aaKnown RBP30.91■■■□□ 2.54
PLXNB3-204ENST00000455214 NOS1P29475 1434 aa30.88■■■□□ 2.53
PLXNB3-204ENST00000455214 SYNMO15061 1565 aa30.88■■■□□ 2.53
PLXNB3-204ENST00000455214 DHX57Q6P158 1386 aaKnown RBP30.86■■■□□ 2.53
PLXNB3-204ENST00000455214 PKD2Q13563 968 aa30.85■■■□□ 2.53
PLXNB3-204ENST00000455214 SETD1BQ9UPS6 1966 aaKnown RBP30.85■■■□□ 2.53
PLXNB3-204ENST00000455214 TRPM2O94759 1503 aa30.84■■■□□ 2.53
PLXNB3-204ENST00000455214 PTPRTO14522 1441 aa30.84■■■□□ 2.53
PLXNB3-204ENST00000455214 PIK3C2BO00750 1634 aa30.83■■■□□ 2.53
PLXNB3-204ENST00000455214 MYO3AQ8NEV4 1616 aa30.81■■■□□ 2.52
PLXNB3-204ENST00000455214 CEBPAP49715 358 aaPredicted RBP30.81■■■□□ 2.52
PLXNB3-204ENST00000455214 PLA2R1Q13018 1463 aa30.79■■■□□ 2.52
PLXNB3-204ENST00000455214 FBXO31Q5XUX0 539 aaPredicted RBP30.78■■■□□ 2.52
PLXNB3-204ENST00000455214 ZNF142P52746 1687 aaPredicted RBP30.77■■■□□ 2.52
PLXNB3-204ENST00000455214 TNRQ92752 1358 aa30.76■■■□□ 2.51
PLXNB3-204ENST00000455214 CLTCL1P53675 1640 aa30.76■■■□□ 2.51
PLXNB3-204ENST00000455214 FOXD1Q16676 465 aa30.74■■■□□ 2.51
PLXNB3-204ENST00000455214 UGGT1Q9NYU2 1555 aa30.73■■■□□ 2.51
PLXNB3-204ENST00000455214 ANKRD30BQ9BXX2 1392 aa30.71■■■□□ 2.51
PLXNB3-204ENST00000455214 KDM5AP29375 1690 aaKnown RBP30.71■■■□□ 2.51
PLXNB3-204ENST00000455214 NLRP1Q9C000 1473 aa30.7■■■□□ 2.51
PLXNB3-204ENST00000455214 PLPPR3Q6T4P5 718 aa30.69■■■□□ 2.5
PLXNB3-204ENST00000455214 KIF1BO60333 1816 aa30.68■■■□□ 2.5
PLXNB3-204ENST00000455214 CEP170BQ9Y4F5 1589 aaPredicted RBP30.67■■■□□ 2.5
PLXNB3-204ENST00000455214 MYO5BQ9ULV0 1848 aa30.66■■■□□ 2.5
PLXNB3-204ENST00000455214 UBR1Q8IWV7 1749 aa30.66■■■□□ 2.5
PLXNB3-204ENST00000455214 ADGRB3O60242 1522 aa30.64■■■□□ 2.5
PLXNB3-204ENST00000455214 A2ML1A8K2U0 1454 aa30.63■■■□□ 2.49
PLXNB3-204ENST00000455214 TMEM131LA2VDJ0 1609 aa30.62■■■□□ 2.49
PLXNB3-204ENST00000455214 CCDC144AA2RUR9 1427 aa30.62■■■□□ 2.49
PLXNB3-204ENST00000455214 SLC52A1Q9NWF4 448 aa30.61■■■□□ 2.49
PLXNB3-204ENST00000455214 UHRF1BP1Q6BDS2 1440 aa30.61■■■□□ 2.49
PLXNB3-204ENST00000455214 NEURL4Q96JN8 1562 aa30.61■■■□□ 2.49
PLXNB3-204ENST00000455214 IDI1Q13907 227 aa30.56■■■□□ 2.48
PLXNB3-204ENST00000455214 LMTK3Q96Q04 1460 aa30.54■■■□□ 2.48
PLXNB3-204ENST00000455214 CLSPNQ9HAW4 1339 aa30.53■■■□□ 2.48
PLXNB3-204ENST00000455214 SPATA31E1Q6ZUB1 1445 aa30.51■■■□□ 2.47
PLXNB3-204ENST00000455214 IFT172Q9UG01 1749 aa30.5■■■□□ 2.47
PLXNB3-204ENST00000455214 PPLO60437 1756 aa30.46■■■□□ 2.47
PLXNB3-204ENST00000455214 SLIT1O75093 1534 aa30.45■■■□□ 2.47
PLXNB3-204ENST00000455214 ARHGAP23Q9P227 1491 aa30.44■■■□□ 2.46
PLXNB3-204ENST00000455214 CCER1Q8TC90 406 aaPredicted RBP30.44■■■□□ 2.46
PLXNB3-204ENST00000455214 NEXMIFQ5QGS0 1516 aa30.42■■■□□ 2.46
PLXNB3-204ENST00000455214 POLR1AO95602 1720 aaPredicted RBP30.41■■■□□ 2.46
PLXNB3-204ENST00000455214 SIN3AQ96ST3 1273 aa30.4■■■□□ 2.46
PLXNB3-204ENST00000455214 AEBP2Q6ZN18 517 aaPredicted RBP30.39■■■□□ 2.46
PLXNB3-204ENST00000455214 ZFYVE9O95405 1425 aa30.39■■■□□ 2.45
PLXNB3-204ENST00000455214 STAG3Q9UJ98 1225 aa30.37■■■□□ 2.45
PLXNB3-204ENST00000455214 TMEM2Q9UHN6 1383 aa30.37■■■□□ 2.45
PLXNB3-204ENST00000455214 CHGAP10645 457 aaKnown RBP30.36■■■□□ 2.45
PLXNB3-204ENST00000455214 THEMISQ8N1K5 641 aaPredicted RBP30.35■■■□□ 2.45
PLXNB3-204ENST00000455214 RIMS2Q9UQ26 1411 aa30.33■■■□□ 2.45
PLXNB3-204ENST00000455214 STRCQ7RTU9 1775 aa30.31■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms