RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 WASHC2CQ9Y4E1 1318 aa27.2■■□□□ 1.95
COPS7A-202ENST00000455113 KIF15Q9NS87 1388 aa27.2■■□□□ 1.95
COPS7A-202ENST00000455113 CHIC2Q9UKJ5 165 aa27.2■■□□□ 1.94
COPS7A-202ENST00000455113 ANKRD30AQ9BXX3 1397 aa27.2■■□□□ 1.94
COPS7A-202ENST00000455113 EIF2AK4Q9P2K8 1649 aaKnown RBP27.19■■□□□ 1.94
COPS7A-202ENST00000455113 FAM135AQ9P2D6 1515 aa27.18■■□□□ 1.94
COPS7A-202ENST00000455113 HSPA2P54652 639 aa27.18■■□□□ 1.94
COPS7A-202ENST00000455113 NPATQ14207 1427 aa27.17■■□□□ 1.94
COPS7A-202ENST00000455113 KDM5DQ9BY66 1539 aa27.17■■□□□ 1.94
COPS7A-202ENST00000455113 ERBINQ96RT1 1412 aa27.13■■□□□ 1.93
COPS7A-202ENST00000455113 RNF17Q9BXT8 1623 aaKnown RBP27.12■■□□□ 1.93
COPS7A-202ENST00000455113 NCOA1Q15788 1441 aa27.09■■□□□ 1.93
COPS7A-202ENST00000455113 PTPRKQ15262 1439 aa27.07■■□□□ 1.92
COPS7A-202ENST00000455113 ZC3H13Q5T200 1668 aaKnown RBP27.07■■□□□ 1.92
COPS7A-202ENST00000455113 ADGRL2O95490 1459 aa27.06■■□□□ 1.92
COPS7A-202ENST00000455113 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.04■■□□□ 1.92
COPS7A-202ENST00000455113 PZPP20742 1482 aa27.03■■□□□ 1.92
COPS7A-202ENST00000455113 KANK1Q14678 1352 aa27.03■■□□□ 1.92
COPS7A-202ENST00000455113 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.03■■□□□ 1.92
COPS7A-202ENST00000455113 ITGAEP38570 1179 aa27.02■■□□□ 1.92
COPS7A-202ENST00000455113 ABCC3O15438 1527 aa27.01■■□□□ 1.91
COPS7A-202ENST00000455113 MYO3AQ8NEV4 1616 aa27■■□□□ 1.91
COPS7A-202ENST00000455113 MROH1Q8NDA8 1641 aa26.99■■□□□ 1.91
COPS7A-202ENST00000455113 PRDM15P57071 1507 aaPredicted RBP26.99■■□□□ 1.91
COPS7A-202ENST00000455113 FBXO31Q5XUX0 539 aaPredicted RBP26.99■■□□□ 1.91
COPS7A-202ENST00000455113 DMRT2Q9Y5R5 561 aa26.98■■□□□ 1.91
COPS7A-202ENST00000455113 ANKRD50Q9ULJ7 1429 aa26.98■■□□□ 1.91
COPS7A-202ENST00000455113 CEP152O94986 1710 aa26.97■■□□□ 1.91
COPS7A-202ENST00000455113 TNRQ92752 1358 aa26.97■■□□□ 1.91
COPS7A-202ENST00000455113 ROCK1Q13464 1354 aa26.96■■□□□ 1.91
COPS7A-202ENST00000455113 DEPDC5O75140 1603 aa26.96■■□□□ 1.91
COPS7A-202ENST00000455113 CEP170BQ9Y4F5 1589 aaPredicted RBP26.94■■□□□ 1.9
COPS7A-202ENST00000455113 ZNF142P52746 1687 aaPredicted RBP26.94■■□□□ 1.9
COPS7A-202ENST00000455113 CAMSAP1Q5T5Y3 1602 aa26.94■■□□□ 1.9
COPS7A-202ENST00000455113 RRBP1Q9P2E9 1410 aaKnown RBP26.94■■□□□ 1.9
COPS7A-202ENST00000455113 A2ML1A8K2U0 1454 aa26.9■■□□□ 1.9
COPS7A-202ENST00000455113 STRCQ7RTU9 1775 aa26.89■■□□□ 1.9
COPS7A-202ENST00000455113 CFAP65Q6ZU64 1925 aaKnown RBP26.89■■□□□ 1.89
COPS7A-202ENST00000455113 NLRP1Q9C000 1473 aa26.87■■□□□ 1.89
COPS7A-202ENST00000455113 ARHGAP31Q2M1Z3 1444 aa26.87■■□□□ 1.89
COPS7A-202ENST00000455113 SPATA31D1Q6ZQQ2 1576 aa26.85■■□□□ 1.89
COPS7A-202ENST00000455113 ERVK-7P63135 1459 aa26.85■■□□□ 1.89
COPS7A-202ENST00000455113 PLA2R1Q13018 1463 aa26.83■■□□□ 1.89
COPS7A-202ENST00000455113 LMTK2Q8IWU2 1503 aa26.83■■□□□ 1.89
COPS7A-202ENST00000455113 PKD2Q13563 968 aa26.82■■□□□ 1.88
COPS7A-202ENST00000455113 THEMISQ8N1K5 641 aaPredicted RBP26.82■■□□□ 1.88
COPS7A-202ENST00000455113 VWDEQ8N2E2 1590 aa26.82■■□□□ 1.88
COPS7A-202ENST00000455113 UGGT1Q9NYU2 1555 aa26.81■■□□□ 1.88
COPS7A-202ENST00000455113 PTPRTO14522 1441 aa26.8■■□□□ 1.88
COPS7A-202ENST00000455113 NCKAP5LQ9HCH0 1330 aa26.78■■□□□ 1.88
COPS7A-202ENST00000455113 UNC13BO14795 1591 aa26.76■■□□□ 1.88
COPS7A-202ENST00000455113 EFCAB6Q5THR3 1501 aa26.76■■□□□ 1.87
COPS7A-202ENST00000455113 ANKLE2Q86XL3 938 aa26.73■■□□□ 1.87
COPS7A-202ENST00000455113 STAG3Q9UJ98 1225 aa26.72■■□□□ 1.87
COPS7A-202ENST00000455113 NUP155O75694 1391 aa26.72■■□□□ 1.87
COPS7A-202ENST00000455113 TET3O43151 1660 aa26.71■■□□□ 1.87
COPS7A-202ENST00000455113 RPRD2Q5VT52 1461 aaKnown RBP26.71■■□□□ 1.87
COPS7A-202ENST00000455113 POLR1AO95602 1720 aaPredicted RBP26.69■■□□□ 1.86
COPS7A-202ENST00000455113 GCC2Q8IWJ2 1684 aa26.69■■□□□ 1.86
COPS7A-202ENST00000455113 IQGAP3Q86VI3 1631 aa26.67■■□□□ 1.86
COPS7A-202ENST00000455113 SLC52A1Q9NWF4 448 aa26.65■■□□□ 1.86
COPS7A-202ENST00000455113 NAIPQ13075 1403 aa26.65■■□□□ 1.86
COPS7A-202ENST00000455113 UBR1Q8IWV7 1749 aa26.65■■□□□ 1.86
COPS7A-202ENST00000455113 NOS1P29475 1434 aa26.64■■□□□ 1.86
COPS7A-202ENST00000455113 CERKQ8TCT0 537 aa26.64■■□□□ 1.85
COPS7A-202ENST00000455113 IDI1Q13907 227 aa26.63■■□□□ 1.85
COPS7A-202ENST00000455113 HFM1A2PYH4 1435 aa26.63■■□□□ 1.85
COPS7A-202ENST00000455113 PIK3C2BO00750 1634 aa26.62■■□□□ 1.85
COPS7A-202ENST00000455113 ILDR1Q86SU0 546 aaPredicted RBP26.61■■□□□ 1.85
COPS7A-202ENST00000455113 SYNMO15061 1565 aa26.6■■□□□ 1.85
COPS7A-202ENST00000455113 EID1Q9Y6B2 187 aa26.6■■□□□ 1.85
COPS7A-202ENST00000455113 FBXO41Q8TF61 875 aa26.59■■□□□ 1.85
COPS7A-202ENST00000455113 E9PCH4 1651 aa26.58■■□□□ 1.85
COPS7A-202ENST00000455113 KDM5AP29375 1690 aaKnown RBP26.58■■□□□ 1.85
COPS7A-202ENST00000455113 NEURL4Q96JN8 1562 aa26.57■■□□□ 1.84
COPS7A-202ENST00000455113 TRIM52Q96A61 297 aa26.57■■□□□ 1.84
COPS7A-202ENST00000455113 NPHP4O75161 1426 aaPredicted RBP26.57■■□□□ 1.84
COPS7A-202ENST00000455113 TXNDC2Q86VQ3 553 aa26.56■■□□□ 1.84
COPS7A-202ENST00000455113 MED14O60244 1454 aa26.55■■□□□ 1.84
COPS7A-202ENST00000455113 SLIT1O75093 1534 aa26.54■■□□□ 1.84
COPS7A-202ENST00000455113 ZNF335Q9H4Z2 1342 aaPredicted RBP26.54■■□□□ 1.84
COPS7A-202ENST00000455113 SCAF11Q99590 1463 aaKnown RBP26.53■■□□□ 1.84
COPS7A-202ENST00000455113 TMEM2Q9UHN6 1383 aa26.52■■□□□ 1.84
COPS7A-202ENST00000455113 IQGAP1P46940 1657 aa26.52■■□□□ 1.84
COPS7A-202ENST00000455113 TRIM26Q12899 539 aaPredicted RBP26.52■■□□□ 1.84
COPS7A-202ENST00000455113 ADGRB3O60242 1522 aa26.52■■□□□ 1.84
COPS7A-202ENST00000455113 ARHGAP23Q9P227 1491 aa26.51■■□□□ 1.84
COPS7A-202ENST00000455113 LTBP4Q8N2S1 1624 aa26.5■■□□□ 1.83
COPS7A-202ENST00000455113 CHGAP10645 457 aaKnown RBP26.5■■□□□ 1.83
COPS7A-202ENST00000455113 LTKP29376 864 aa26.48■■□□□ 1.83
COPS7A-202ENST00000455113 HDGFP51858 240 aaKnown RBP26.48■■□□□ 1.83
COPS7A-202ENST00000455113 SLC4A1APQ9BWU0 796 aaKnown RBP26.45■■□□□ 1.82
COPS7A-202ENST00000455113 ACIN1Q9UKV3 1341 aaKnown RBP26.44■■□□□ 1.82
COPS7A-202ENST00000455113 SPHKAPQ2M3C7 1700 aa26.44■■□□□ 1.82
COPS7A-202ENST00000455113 IQSEC2Q5JU85 1478 aa26.43■■□□□ 1.82
COPS7A-202ENST00000455113 PPP1R15AO75807 674 aaPredicted RBP26.42■■□□□ 1.82
COPS7A-202ENST00000455113 BCANQ96GW7 911 aa26.42■■□□□ 1.82
COPS7A-202ENST00000455113 TMEM131LA2VDJ0 1609 aa26.41■■□□□ 1.82
COPS7A-202ENST00000455113 MYO5BQ9ULV0 1848 aa26.41■■□□□ 1.82
COPS7A-202ENST00000455113 CPS1P31327 1500 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms