RNA–Protein interactions for RNA: ENST00000455076.1

TNRC18-208, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2

Gene TNRC18, Length 577 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-208ENST00000455076 KDM5DQ9BY66 1539 aa31.7■■■□□ 2.66
TNRC18-208ENST00000455076 KIF3BO15066 747 aa31.68■■■□□ 2.66
TNRC18-208ENST00000455076 PTPRKQ15262 1439 aa31.65■■■□□ 2.66
TNRC18-208ENST00000455076 KIF15Q9NS87 1388 aa31.63■■■□□ 2.65
TNRC18-208ENST00000455076 ERBINQ96RT1 1412 aa31.63■■■□□ 2.65
TNRC18-208ENST00000455076 HSPA2P54652 639 aa31.62■■■□□ 2.65
TNRC18-208ENST00000455076 MROH1Q8NDA8 1641 aa31.62■■■□□ 2.65
TNRC18-208ENST00000455076 ZC3H13Q5T200 1668 aaKnown RBP31.61■■■□□ 2.65
TNRC18-208ENST00000455076 ADGRL2O95490 1459 aa31.61■■■□□ 2.65
TNRC18-208ENST00000455076 PZPP20742 1482 aa31.58■■■□□ 2.65
TNRC18-208ENST00000455076 ZNF142P52746 1687 aaPredicted RBP31.57■■■□□ 2.65
TNRC18-208ENST00000455076 MYO3AQ8NEV4 1616 aa31.57■■■□□ 2.64
TNRC18-208ENST00000455076 ANKRD30AQ9BXX3 1397 aa31.56■■■□□ 2.64
TNRC18-208ENST00000455076 ABCC3O15438 1527 aa31.55■■■□□ 2.64
TNRC18-208ENST00000455076 PRDM15P57071 1507 aaPredicted RBP31.55■■■□□ 2.64
TNRC18-208ENST00000455076 NCOA1Q15788 1441 aa31.55■■■□□ 2.64
TNRC18-208ENST00000455076 DEPDC5O75140 1603 aa31.53■■■□□ 2.64
TNRC18-208ENST00000455076 WASHC2CQ9Y4E1 1318 aa31.52■■■□□ 2.64
TNRC18-208ENST00000455076 STRCQ7RTU9 1775 aa31.51■■■□□ 2.63
TNRC18-208ENST00000455076 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.49■■■□□ 2.63
TNRC18-208ENST00000455076 CEP170BQ9Y4F5 1589 aaPredicted RBP31.48■■■□□ 2.63
TNRC18-208ENST00000455076 FAM50AQ14320 339 aaKnown RBP31.48■■■□□ 2.63
TNRC18-208ENST00000455076 RRP7BPQ9NSQ0 103 aa31.48■■■□□ 2.63
TNRC18-208ENST00000455076 CEP152O94986 1710 aa31.44■■■□□ 2.62
TNRC18-208ENST00000455076 CAMSAP1Q5T5Y3 1602 aa31.43■■■□□ 2.62
TNRC18-208ENST00000455076 CHIC2Q9UKJ5 165 aa31.42■■■□□ 2.62
TNRC18-208ENST00000455076 A2ML1A8K2U0 1454 aa31.41■■■□□ 2.62
TNRC18-208ENST00000455076 SPATA31D1Q6ZQQ2 1576 aa31.41■■■□□ 2.62
TNRC18-208ENST00000455076 VWDEQ8N2E2 1590 aa31.41■■■□□ 2.62
TNRC18-208ENST00000455076 TNRQ92752 1358 aa31.41■■■□□ 2.62
TNRC18-208ENST00000455076 PLA2R1Q13018 1463 aa31.4■■■□□ 2.62
TNRC18-208ENST00000455076 ROCK1Q13464 1354 aa31.39■■■□□ 2.62
TNRC18-208ENST00000455076 ARHGAP31Q2M1Z3 1444 aa31.39■■■□□ 2.62
TNRC18-208ENST00000455076 LMTK2Q8IWU2 1503 aa31.38■■■□□ 2.61
TNRC18-208ENST00000455076 FBXO31Q5XUX0 539 aaPredicted RBP31.37■■■□□ 2.61
TNRC18-208ENST00000455076 NLRP1Q9C000 1473 aa31.36■■■□□ 2.61
TNRC18-208ENST00000455076 PTPRTO14522 1441 aa31.36■■■□□ 2.61
TNRC18-208ENST00000455076 RRBP1Q9P2E9 1410 aaKnown RBP31.36■■■□□ 2.61
TNRC18-208ENST00000455076 ERVK-7P63135 1459 aa31.35■■■□□ 2.61
TNRC18-208ENST00000455076 DMRT2Q9Y5R5 561 aa31.35■■■□□ 2.61
TNRC18-208ENST00000455076 ANKRD50Q9ULJ7 1429 aa31.34■■■□□ 2.61
TNRC18-208ENST00000455076 PPARGC1BQ86YN6 1023 aaKnown RBP31.31■■■□□ 2.6
TNRC18-208ENST00000455076 KANK1Q14678 1352 aa31.3■■■□□ 2.6
TNRC18-208ENST00000455076 UNC13BO14795 1591 aa31.26■■■□□ 2.59
TNRC18-208ENST00000455076 EFCAB6Q5THR3 1501 aa31.24■■■□□ 2.59
TNRC18-208ENST00000455076 PKD2Q13563 968 aa31.23■■■□□ 2.59
TNRC18-208ENST00000455076 UGGT1Q9NYU2 1555 aa31.22■■■□□ 2.59
TNRC18-208ENST00000455076 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.2■■■□□ 2.59
TNRC18-208ENST00000455076 POLR1AO95602 1720 aaPredicted RBP31.18■■■□□ 2.58
TNRC18-208ENST00000455076 CFAP65Q6ZU64 1925 aaKnown RBP31.17■■■□□ 2.58
TNRC18-208ENST00000455076 RPRD2Q5VT52 1461 aaKnown RBP31.16■■■□□ 2.58
TNRC18-208ENST00000455076 TET3O43151 1660 aa31.16■■■□□ 2.58
TNRC18-208ENST00000455076 NEURL4Q96JN8 1562 aa31.15■■■□□ 2.58
TNRC18-208ENST00000455076 NCKAP5LQ9HCH0 1330 aa31.14■■■□□ 2.58
TNRC18-208ENST00000455076 UBR1Q8IWV7 1749 aa31.13■■■□□ 2.57
TNRC18-208ENST00000455076 THEMISQ8N1K5 641 aaPredicted RBP31.13■■■□□ 2.57
TNRC18-208ENST00000455076 NOS1P29475 1434 aa31.13■■■□□ 2.57
TNRC18-208ENST00000455076 IQGAP3Q86VI3 1631 aa31.12■■■□□ 2.57
TNRC18-208ENST00000455076 GCC2Q8IWJ2 1684 aa31.12■■■□□ 2.57
TNRC18-208ENST00000455076 KDM5AP29375 1690 aaKnown RBP31.11■■■□□ 2.57
TNRC18-208ENST00000455076 ILDR1Q86SU0 546 aaPredicted RBP31.11■■■□□ 2.57
TNRC18-208ENST00000455076 LTBP4Q8N2S1 1624 aa31.09■■■□□ 2.57
TNRC18-208ENST00000455076 SYNMO15061 1565 aa31.09■■■□□ 2.57
TNRC18-208ENST00000455076 MED14O60244 1454 aa31.08■■■□□ 2.57
TNRC18-208ENST00000455076 ITGAEP38570 1179 aa31.08■■■□□ 2.57
TNRC18-208ENST00000455076 CERKQ8TCT0 537 aa31.06■■■□□ 2.56
TNRC18-208ENST00000455076 FBXO41Q8TF61 875 aa31.06■■■□□ 2.56
TNRC18-208ENST00000455076 PIK3C2BO00750 1634 aa31.05■■■□□ 2.56
TNRC18-208ENST00000455076 SLIT1O75093 1534 aa31.04■■■□□ 2.56
TNRC18-208ENST00000455076 ARHGAP23Q9P227 1491 aa31.04■■■□□ 2.56
TNRC18-208ENST00000455076 ANKLE2Q86XL3 938 aa31.02■■■□□ 2.56
TNRC18-208ENST00000455076 NAIPQ13075 1403 aa31.01■■■□□ 2.55
TNRC18-208ENST00000455076 IQSEC2Q5JU85 1478 aa31■■■□□ 2.55
TNRC18-208ENST00000455076 E9PCH4 1651 aa31■■■□□ 2.55
TNRC18-208ENST00000455076 HFM1A2PYH4 1435 aa30.98■■■□□ 2.55
TNRC18-208ENST00000455076 NPHP4O75161 1426 aaPredicted RBP30.97■■■□□ 2.55
TNRC18-208ENST00000455076 IQGAP1P46940 1657 aa30.97■■■□□ 2.55
TNRC18-208ENST00000455076 SLC52A1Q9NWF4 448 aa30.96■■■□□ 2.55
TNRC18-208ENST00000455076 ADGRB3O60242 1522 aa30.96■■■□□ 2.55
TNRC18-208ENST00000455076 NUP155O75694 1391 aa30.95■■■□□ 2.55
TNRC18-208ENST00000455076 SCAF11Q99590 1463 aaKnown RBP30.95■■■□□ 2.54
TNRC18-208ENST00000455076 IDI1Q13907 227 aa30.94■■■□□ 2.54
TNRC18-208ENST00000455076 ZNF335Q9H4Z2 1342 aaPredicted RBP30.92■■■□□ 2.54
TNRC18-208ENST00000455076 TMEM2Q9UHN6 1383 aa30.91■■■□□ 2.54
TNRC18-208ENST00000455076 CPS1P31327 1500 aa30.85■■■□□ 2.53
TNRC18-208ENST00000455076 TMEM131LA2VDJ0 1609 aa30.84■■■□□ 2.53
TNRC18-208ENST00000455076 LTKP29376 864 aa30.83■■■□□ 2.53
TNRC18-208ENST00000455076 STAG3Q9UJ98 1225 aa30.82■■■□□ 2.52
TNRC18-208ENST00000455076 TXNDC2Q86VQ3 553 aa30.8■■■□□ 2.52
TNRC18-208ENST00000455076 SPHKAPQ2M3C7 1700 aa30.8■■■□□ 2.52
TNRC18-208ENST00000455076 EID1Q9Y6B2 187 aa30.79■■■□□ 2.52
TNRC18-208ENST00000455076 MYO5BQ9ULV0 1848 aa30.78■■■□□ 2.52
TNRC18-208ENST00000455076 ZFYVE9O95405 1425 aa30.78■■■□□ 2.52
TNRC18-208ENST00000455076 STRCP1A6NGW2 1772 aa30.72■■■□□ 2.51
TNRC18-208ENST00000455076 TRPM2O94759 1503 aa30.72■■■□□ 2.51
TNRC18-208ENST00000455076 RIMS2Q9UQ26 1411 aa30.68■■■□□ 2.5
TNRC18-208ENST00000455076 PLEKHG1Q9ULL1 1385 aa30.65■■■□□ 2.5
TNRC18-208ENST00000455076 CLTCL1P53675 1640 aa30.63■■■□□ 2.49
TNRC18-208ENST00000455076 LRRC7Q96NW7 1537 aa30.62■■■□□ 2.49
TNRC18-208ENST00000455076 HDGFP51858 240 aaKnown RBP30.61■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms