RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 FBXO31Q5XUX0 539 aaPredicted RBP28.08■■■□□ 2.09
UBE2D4-209ENST00000454428 RTEL1-TNFRSF6BF6WH68 1400 aa28.08■■■□□ 2.09
UBE2D4-209ENST00000454428 DHX29Q7Z478 1369 aaKnown RBP28.07■■■□□ 2.08
UBE2D4-209ENST00000454428 PIP4K2BP78356 416 aa28.06■■■□□ 2.08
UBE2D4-209ENST00000454428 MTUS2Q5JR59 1369 aa28.06■■■□□ 2.08
UBE2D4-209ENST00000454428 ALKQ9UM73 1620 aa28.06■■■□□ 2.08
UBE2D4-209ENST00000454428 VWDEQ8N2E2 1590 aa28.05■■■□□ 2.08
UBE2D4-209ENST00000454428 TNRQ92752 1358 aa28.05■■■□□ 2.08
UBE2D4-209ENST00000454428 PZPP20742 1482 aa28.04■■■□□ 2.08
UBE2D4-209ENST00000454428 SCAF1Q9H7N4 1312 aaKnown RBP28.03■■■□□ 2.08
UBE2D4-209ENST00000454428 KDM5DQ9BY66 1539 aa28.02■■■□□ 2.08
UBE2D4-209ENST00000454428 TOM1O60784 492 aa28.01■■■□□ 2.07
UBE2D4-209ENST00000454428 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.99■■■□□ 2.07
UBE2D4-209ENST00000454428 EHBP1L1Q8N3D4 1523 aa27.98■■■□□ 2.07
UBE2D4-209ENST00000454428 FAM135AQ9P2D6 1515 aa27.98■■■□□ 2.07
UBE2D4-209ENST00000454428 KIF3BO15066 747 aa27.97■■■□□ 2.07
UBE2D4-209ENST00000454428 MED14O60244 1454 aa27.95■■■□□ 2.07
UBE2D4-209ENST00000454428 CEP162Q5TB80 1403 aa27.95■■■□□ 2.07
UBE2D4-209ENST00000454428 DEPDC5O75140 1603 aa27.95■■■□□ 2.06
UBE2D4-209ENST00000454428 MIA2Q96PC5 1412 aa27.93■■■□□ 2.06
UBE2D4-209ENST00000454428 ANKLE2Q86XL3 938 aa27.93■■■□□ 2.06
UBE2D4-209ENST00000454428 CCDC141Q6ZP82 1450 aa27.93■■■□□ 2.06
UBE2D4-209ENST00000454428 STRCP1A6NGW2 1772 aa27.93■■■□□ 2.06
UBE2D4-209ENST00000454428 UGGT1Q9NYU2 1555 aa27.92■■■□□ 2.06
UBE2D4-209ENST00000454428 NLRP1Q9C000 1473 aa27.92■■■□□ 2.06
UBE2D4-209ENST00000454428 NPHP4O75161 1426 aaPredicted RBP27.92■■■□□ 2.06
UBE2D4-209ENST00000454428 WASHC2CQ9Y4E1 1318 aa27.9■■■□□ 2.06
UBE2D4-209ENST00000454428 THEMISQ8N1K5 641 aaPredicted RBP27.89■■■□□ 2.06
UBE2D4-209ENST00000454428 CAMSAP2Q08AD1 1489 aa27.89■■■□□ 2.05
UBE2D4-209ENST00000454428 IQGAP1P46940 1657 aa27.88■■■□□ 2.05
UBE2D4-209ENST00000454428 LRRC7Q96NW7 1537 aa27.84■■■□□ 2.05
UBE2D4-209ENST00000454428 NCOA2Q15596 1464 aa27.83■■■□□ 2.04
UBE2D4-209ENST00000454428 ARHGEF5Q12774 1597 aa27.81■■■□□ 2.04
UBE2D4-209ENST00000454428 RNF17Q9BXT8 1623 aaKnown RBP27.81■■■□□ 2.04
UBE2D4-209ENST00000454428 ABCC3O15438 1527 aa27.79■■■□□ 2.04
UBE2D4-209ENST00000454428 RSPH4AQ5TD94 716 aa27.79■■■□□ 2.04
UBE2D4-209ENST00000454428 PHF23Q9BUL5 403 aaPredicted RBP27.79■■■□□ 2.04
UBE2D4-209ENST00000454428 ZC3H13Q5T200 1668 aaKnown RBP27.78■■■□□ 2.04
UBE2D4-209ENST00000454428 SYNMO15061 1565 aa27.78■■■□□ 2.04
UBE2D4-209ENST00000454428 ERVK-7P63135 1459 aa27.74■■■□□ 2.03
UBE2D4-209ENST00000454428 MROH1Q8NDA8 1641 aa27.74■■■□□ 2.03
UBE2D4-209ENST00000454428 SENP3Q9H4L4 574 aaPredicted RBP27.73■■■□□ 2.03
UBE2D4-209ENST00000454428 UBR1Q8IWV7 1749 aa27.72■■■□□ 2.03
UBE2D4-209ENST00000454428 MAST1Q9Y2H9 1570 aa27.69■■■□□ 2.02
UBE2D4-209ENST00000454428 RGS17Q9UGC6 210 aaPredicted RBP27.69■■■□□ 2.02
UBE2D4-209ENST00000454428 XIRP1Q702N8 1843 aaKnown RBP27.69■■■□□ 2.02
UBE2D4-209ENST00000454428 EIF2AK4Q9P2K8 1649 aaKnown RBP27.68■■■□□ 2.02
UBE2D4-209ENST00000454428 CEP152O94986 1710 aa27.67■■■□□ 2.02
UBE2D4-209ENST00000454428 TSPY4P0CV99 314 aa27.67■■■□□ 2.02
UBE2D4-209ENST00000454428 TSPY10P0CW01 314 aa27.67■■■□□ 2.02
UBE2D4-209ENST00000454428 CFAP65Q6ZU64 1925 aaKnown RBP27.66■■■□□ 2.02
UBE2D4-209ENST00000454428 SCAF11Q99590 1463 aaKnown RBP27.64■■■□□ 2.02
UBE2D4-209ENST00000454428 ARHGAP23Q9P227 1491 aa27.64■■■□□ 2.01
UBE2D4-209ENST00000454428 LTKP29376 864 aa27.62■■■□□ 2.01
UBE2D4-209ENST00000454428 SLIT1O75093 1534 aa27.62■■■□□ 2.01
UBE2D4-209ENST00000454428 LRRC9Q6ZRR7 1453 aa27.56■■■□□ 2
UBE2D4-209ENST00000454428 TXNDC2Q86VQ3 553 aa27.54■■■□□ 2
UBE2D4-209ENST00000454428 ARHGAP31Q2M1Z3 1444 aa27.52■■■□□ 2
UBE2D4-209ENST00000454428 PRDM15P57071 1507 aaPredicted RBP27.51■■■□□ 2
UBE2D4-209ENST00000454428 DUOX2Q9NRD8 1548 aa27.51■■■□□ 2
UBE2D4-209ENST00000454428 FAM135BQ49AJ0 1406 aa27.5■■□□□ 1.99
UBE2D4-209ENST00000454428 PIK3C2BO00750 1634 aa27.5■■□□□ 1.99
UBE2D4-209ENST00000454428 POTEAQ6S8J7 498 aa27.46■■□□□ 1.99
UBE2D4-209ENST00000454428 TMEM2Q9UHN6 1383 aa27.45■■□□□ 1.98
UBE2D4-209ENST00000454428 KANK4Q5T7N3 995 aaPredicted RBP27.44■■□□□ 1.98
UBE2D4-209ENST00000454428 MAP3K1Q13233 1512 aa27.44■■□□□ 1.98
UBE2D4-209ENST00000454428 MYOM3Q5VTT5 1437 aa27.43■■□□□ 1.98
UBE2D4-209ENST00000454428 TMEM94Q12767 1356 aa27.43■■□□□ 1.98
UBE2D4-209ENST00000454428 ROBO1Q9Y6N7 1651 aa27.43■■□□□ 1.98
UBE2D4-209ENST00000454428 EID1Q9Y6B2 187 aa27.42■■□□□ 1.98
UBE2D4-209ENST00000454428 TET3O43151 1660 aa27.41■■□□□ 1.98
UBE2D4-209ENST00000454428 KIF15Q9NS87 1388 aa27.41■■□□□ 1.98
UBE2D4-209ENST00000454428 VPS8Q8N3P4 1428 aa27.41■■□□□ 1.98
UBE2D4-209ENST00000454428 ERBINQ96RT1 1412 aa27.41■■□□□ 1.98
UBE2D4-209ENST00000454428 CROCC2H7BZ55 1655 aa27.4■■□□□ 1.98
UBE2D4-209ENST00000454428 KDM5AP29375 1690 aaKnown RBP27.4■■□□□ 1.98
UBE2D4-209ENST00000454428 EFCAB6Q5THR3 1501 aa27.37■■□□□ 1.97
UBE2D4-209ENST00000454428 ABCC5O15440 1437 aa27.37■■□□□ 1.97
UBE2D4-209ENST00000454428 KCNA6P17658 529 aa27.36■■□□□ 1.97
UBE2D4-209ENST00000454428 RBM33Q96EV2 1170 aaKnown RBP27.36■■□□□ 1.97
UBE2D4-209ENST00000454428 IDI1Q13907 227 aa27.34■■□□□ 1.97
UBE2D4-209ENST00000454428 RRP7BPQ9NSQ0 103 aa27.34■■□□□ 1.97
UBE2D4-209ENST00000454428 NWD1Q149M9 1564 aa27.33■■□□□ 1.97
UBE2D4-209ENST00000454428 LMTK2Q8IWU2 1503 aa27.32■■□□□ 1.96
UBE2D4-209ENST00000454428 SLC26A8Q96RN1 970 aa27.32■■□□□ 1.96
UBE2D4-209ENST00000454428 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.32■■□□□ 1.96
UBE2D4-209ENST00000454428 SETD1AO15047 1707 aaKnown RBP27.32■■□□□ 1.96
UBE2D4-209ENST00000454428 PROSER2Q86WR7 435 aaPredicted RBP27.29■■□□□ 1.96
UBE2D4-209ENST00000454428 NKTRP30414 1462 aaKnown RBP27.28■■□□□ 1.96
UBE2D4-209ENST00000454428 STAG3Q9UJ98 1225 aa27.28■■□□□ 1.96
UBE2D4-209ENST00000454428 PTPN23Q9H3S7 1636 aa27.27■■□□□ 1.96
UBE2D4-209ENST00000454428 NOS1P29475 1434 aa27.27■■□□□ 1.96
UBE2D4-209ENST00000454428 ADGRB3O60242 1522 aa27.26■■□□□ 1.96
UBE2D4-209ENST00000454428 DAPK1P53355 1430 aa27.25■■□□□ 1.95
UBE2D4-209ENST00000454428 PHLPP1O60346 1717 aa27.25■■□□□ 1.95
UBE2D4-209ENST00000454428 KANK1Q14678 1352 aa27.24■■□□□ 1.95
UBE2D4-209ENST00000454428 CHD2O14647 1828 aaKnown RBP27.19■■□□□ 1.94
UBE2D4-209ENST00000454428 SLAIN2Q9P270 581 aa27.19■■□□□ 1.94
UBE2D4-209ENST00000454428 MSH6P52701 1360 aa27.19■■□□□ 1.94
UBE2D4-209ENST00000454428 COL16A1Q07092 1604 aaPredicted RBP27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms