RNA–Protein interactions for RNA: ENST00000453933.5

HMG20B-206, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-206ENST00000453933 HSPA1LP34931 641 aa35.16■■■■□ 3.22
HMG20B-206ENST00000453933 SCAF1Q9H7N4 1312 aaKnown RBP35.15■■■■□ 3.22
HMG20B-206ENST00000453933 PIP4K2BP78356 416 aa35.15■■■■□ 3.22
HMG20B-206ENST00000453933 CEP162Q5TB80 1403 aa35.1■■■■□ 3.21
HMG20B-206ENST00000453933 TOM1O60784 492 aa35.1■■■■□ 3.21
HMG20B-206ENST00000453933 EHBP1L1Q8N3D4 1523 aa35.1■■■■□ 3.21
HMG20B-206ENST00000453933 NEURL4Q96JN8 1562 aa35.09■■■■□ 3.21
HMG20B-206ENST00000453933 SHANK2Q9UPX8 1470 aa35.09■■■■□ 3.21
HMG20B-206ENST00000453933 WASHC2CQ9Y4E1 1318 aa35.08■■■■□ 3.21
HMG20B-206ENST00000453933 PZPP20742 1482 aa35.08■■■■□ 3.21
HMG20B-206ENST00000453933 ANKLE2Q86XL3 938 aa35.07■■■■□ 3.2
HMG20B-206ENST00000453933 CPS1P31327 1500 aa35.06■■■■□ 3.2
HMG20B-206ENST00000453933 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.06■■■■□ 3.23e-6■□□□□ 10.4
HMG20B-206ENST00000453933 KDM5DQ9BY66 1539 aa35.03■■■■□ 3.2
HMG20B-206ENST00000453933 THEMISQ8N1K5 641 aaPredicted RBP35.03■■■■□ 3.2
HMG20B-206ENST00000453933 CCDC141Q6ZP82 1450 aa35.03■■■■□ 3.2
HMG20B-206ENST00000453933 MIA2Q96PC5 1412 aa35.02■■■■□ 3.2
HMG20B-206ENST00000453933 RSPH4AQ5TD94 716 aa35.01■■■■□ 3.2
HMG20B-206ENST00000453933 POLR1AO95602 1720 aaPredicted RBP35.01■■■■□ 3.19
HMG20B-206ENST00000453933 FAM135AQ9P2D6 1515 aa34.97■■■■□ 3.19
HMG20B-206ENST00000453933 CAMSAP2Q08AD1 1489 aa34.97■■■■□ 3.19
HMG20B-206ENST00000453933 MED1Q15648 1581 aaPredicted RBP34.96■■■■□ 3.19
HMG20B-206ENST00000453933 NCOA2Q15596 1464 aa34.96■■■■□ 3.19
HMG20B-206ENST00000453933 VWDEQ8N2E2 1590 aa34.95■■■■□ 3.18
HMG20B-206ENST00000453933 NPHP4O75161 1426 aaPredicted RBP34.94■■■■□ 3.18
HMG20B-206ENST00000453933 NLRP1Q9C000 1473 aa34.94■■■■□ 3.18
HMG20B-206ENST00000453933 UGGT1Q9NYU2 1555 aa34.92■■■■□ 3.18
HMG20B-206ENST00000453933 MED14O60244 1454 aa34.91■■■■□ 3.18
HMG20B-206ENST00000453933 TSPY4P0CV99 314 aa34.9■■■■□ 3.18
HMG20B-206ENST00000453933 TSPY10P0CW01 314 aa34.9■■■■□ 3.18
HMG20B-206ENST00000453933 ALKQ9UM73 1620 aa34.86■■■■□ 3.17
HMG20B-206ENST00000453933 DEPDC5O75140 1603 aa34.84■■■■□ 3.17
HMG20B-206ENST00000453933 ARHGEF5Q12774 1597 aa34.82■■■■□ 3.16
HMG20B-206ENST00000453933 PHF23Q9BUL5 403 aaPredicted RBP34.79■■■■□ 3.16
HMG20B-206ENST00000453933 SENP3Q9H4L4 574 aaPredicted RBP34.79■■■■□ 3.16
HMG20B-206ENST00000453933 ABCC3O15438 1527 aa34.76■■■■□ 3.16
HMG20B-206ENST00000453933 LRRC7Q96NW7 1537 aa34.76■■■■□ 3.16
HMG20B-206ENST00000453933 IQGAP1P46940 1657 aa34.76■■■■□ 3.15
HMG20B-206ENST00000453933 RNF17Q9BXT8 1623 aaKnown RBP34.72■■■■□ 3.15
HMG20B-206ENST00000453933 ERVK-7P63135 1459 aa34.71■■■■□ 3.15
HMG20B-206ENST00000453933 STRCP1A6NGW2 1772 aa34.71■■■■□ 3.15
HMG20B-206ENST00000453933 MAST1Q9Y2H9 1570 aa34.66■■■■□ 3.14
HMG20B-206ENST00000453933 ZC3H13Q5T200 1668 aaKnown RBP34.64■■■■□ 3.14
HMG20B-206ENST00000453933 LRRC9Q6ZRR7 1453 aa34.64■■■■□ 3.14
HMG20B-206ENST00000453933 LTKP29376 864 aa34.63■■■■□ 3.13
HMG20B-206ENST00000453933 MROH1Q8NDA8 1641 aa34.63■■■■□ 3.13
HMG20B-206ENST00000453933 TXNDC2Q86VQ3 553 aa34.6■■■■□ 3.13
HMG20B-206ENST00000453933 EIF2AK4Q9P2K8 1649 aaKnown RBP34.59■■■■□ 3.13
HMG20B-206ENST00000453933 SCAF11Q99590 1463 aaKnown RBP34.59■■■■□ 3.13
HMG20B-206ENST00000453933 SYNMO15061 1565 aa34.59■■■■□ 3.13
HMG20B-206ENST00000453933 KANK4Q5T7N3 995 aaPredicted RBP34.59■■■■□ 3.13
HMG20B-206ENST00000453933 UBR1Q8IWV7 1749 aa34.56■■■■□ 3.12
HMG20B-206ENST00000453933 ARHGAP23Q9P227 1491 aa34.54■■■■□ 3.12
HMG20B-206ENST00000453933 RGS17Q9UGC6 210 aaPredicted RBP34.53■■■■□ 3.12
HMG20B-206ENST00000453933 CEP152O94986 1710 aa34.52■■■■□ 3.12
HMG20B-206ENST00000453933 VPS8Q8N3P4 1428 aa34.51■■■■□ 3.12
HMG20B-206ENST00000453933 SLIT1O75093 1534 aa34.5■■■■□ 3.11
HMG20B-206ENST00000453933 DUOX2Q9NRD8 1548 aa34.5■■■■□ 3.11
HMG20B-206ENST00000453933 MYOM3Q5VTT5 1437 aa34.5■■■■□ 3.11
HMG20B-206ENST00000453933 EID1Q9Y6B2 187 aa34.49■■■■□ 3.11
HMG20B-206ENST00000453933 CFAP65Q6ZU64 1925 aaKnown RBP34.49■■■■□ 3.11
HMG20B-206ENST00000453933 ARHGAP31Q2M1Z3 1444 aa34.48■■■■□ 3.11
HMG20B-206ENST00000453933 RRP7BPQ9NSQ0 103 aa34.45■■■■□ 3.11
HMG20B-206ENST00000453933 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.44■■■■□ 3.13e-7■■□□□ 14.4
HMG20B-206ENST00000453933 KIF15Q9NS87 1388 aa34.44■■■■□ 3.1
HMG20B-206ENST00000453933 TMEM2Q9UHN6 1383 aa34.41■■■■□ 3.1
HMG20B-206ENST00000453933 LOC105371045A0A1W2PR82 267 aa34.4■■■■□ 3.1
HMG20B-206ENST00000453933 PRDM15P57071 1507 aaPredicted RBP34.4■■■■□ 3.1
HMG20B-206ENST00000453933 STAG3Q9UJ98 1225 aa34.39■■■■□ 3.1
HMG20B-206ENST00000453933 MAP3K1Q13233 1512 aa34.39■■■■□ 3.1
HMG20B-206ENST00000453933 XIRP1Q702N8 1843 aaKnown RBP34.39■■■■□ 3.1
HMG20B-206ENST00000453933 FAM135BQ49AJ0 1406 aa34.38■■■■□ 3.09
HMG20B-206ENST00000453933 ABCC5O15440 1437 aa34.38■■■■□ 3.09
HMG20B-206ENST00000453933 ERBINQ96RT1 1412 aa34.38■■■■□ 3.09
HMG20B-206ENST00000453933 TMEM94Q12767 1356 aa34.36■■■■□ 3.09
HMG20B-206ENST00000453933 PIK3C2BO00750 1634 aa34.35■■■■□ 3.09
HMG20B-206ENST00000453933 IDI1Q13907 227 aa34.35■■■■□ 3.09
HMG20B-206ENST00000453933 KCNA6P17658 529 aa34.33■■■■□ 3.09
HMG20B-206ENST00000453933 RBM33Q96EV2 1170 aaKnown RBP34.31■■■■□ 3.08
HMG20B-206ENST00000453933 SLC26A8Q96RN1 970 aa34.31■■■■□ 3.08
HMG20B-206ENST00000453933 KANK1Q14678 1352 aa34.3■■■■□ 3.08
HMG20B-206ENST00000453933 POTEAQ6S8J7 498 aa34.29■■■■□ 3.08
HMG20B-206ENST00000453933 PROSER2Q86WR7 435 aaPredicted RBP34.29■■■■□ 3.08
HMG20B-206ENST00000453933 EFCAB6Q5THR3 1501 aa34.27■■■■□ 3.08
HMG20B-206ENST00000453933 DAPK1P53355 1430 aa34.24■■■■□ 3.07
HMG20B-206ENST00000453933 TET3O43151 1660 aa34.23■■■■□ 3.07
HMG20B-206ENST00000453933 CHIC2Q9UKJ5 165 aa34.23■■■■□ 3.07
HMG20B-206ENST00000453933 CROCC2H7BZ55 1655 aa34.22■■■■□ 3.07
HMG20B-206ENST00000453933 PTPN23Q9H3S7 1636 aa34.21■■■■□ 3.07
HMG20B-206ENST00000453933 LMTK2Q8IWU2 1503 aa34.2■■■■□ 3.07
HMG20B-206ENST00000453933 KDM5AP29375 1690 aaKnown RBP34.18■■■■□ 3.06
HMG20B-206ENST00000453933 NOS1P29475 1434 aa34.17■■■■□ 3.06
HMG20B-206ENST00000453933 ROBO1Q9Y6N7 1651 aa34.17■■■■□ 3.06
HMG20B-206ENST00000453933 ANKRD30AQ9BXX3 1397 aa34.16■■■■□ 3.06
HMG20B-206ENST00000453933 BCANQ96GW7 911 aa34.15■■■■□ 3.06
HMG20B-206ENST00000453933 SLC52A1Q9NWF4 448 aa34.13■■■■□ 3.05
HMG20B-206ENST00000453933 FGD6Q6ZV73 1430 aa34.12■■■■□ 3.05
HMG20B-206ENST00000453933 SLAIN2Q9P270 581 aa34.11■■■■□ 3.05
HMG20B-206ENST00000453933 NKTRP30414 1462 aaKnown RBP34.1■■■■□ 3.05
HMG20B-206ENST00000453933 APLP2Q06481 763 aa34.1■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms