RNA–Protein interactions for RNA: ENST00000453727.6

LMO3-210, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 2,403 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-210ENST00000453727 SLC4A1APQ9BWU0 796 aaKnown RBP12.2□□□□□ -0.46
LMO3-210ENST00000453727 HECW2Q9P2P5 1572 aa12.19□□□□□ -0.46
LMO3-210ENST00000453727 ERBINQ96RT1 1412 aa12.19□□□□□ -0.46
LMO3-210ENST00000453727 FOXD1Q16676 465 aa12.19□□□□□ -0.46
LMO3-210ENST00000453727 KDM5DQ9BY66 1539 aa12.18□□□□□ -0.46
LMO3-210ENST00000453727 NUP155O75694 1391 aa12.18□□□□□ -0.46
LMO3-210ENST00000453727 FRMPD1Q5SYB0 1578 aa12.17□□□□□ -0.46
LMO3-210ENST00000453727 UNC13BO14795 1591 aa12.16□□□□□ -0.46
LMO3-210ENST00000453727 DHX29Q7Z478 1369 aaKnown RBP12.16□□□□□ -0.46
LMO3-210ENST00000453727 COL17A1Q9UMD9 1497 aaPredicted RBP12.16□□□□□ -0.46
LMO3-210ENST00000453727 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.15□□□□□ -0.46
LMO3-210ENST00000453727 ABCA6Q8N139 1617 aa12.14□□□□□ -0.47
LMO3-210ENST00000453727 ANKRD30BQ9BXX2 1392 aa12.14□□□□□ -0.47
LMO3-210ENST00000453727 TSHZ2Q9NRE2 1034 aa12.14□□□□□ -0.47
LMO3-210ENST00000453727 A2MP01023 1474 aa12.14□□□□□ -0.47
LMO3-210ENST00000453727 YEATS2Q9ULM3 1422 aa12.14□□□□□ -0.47
LMO3-210ENST00000453727 ZMYM4Q5VZL5 1548 aa12.14□□□□□ -0.47
LMO3-210ENST00000453727 FAM135AQ9P2D6 1515 aa12.14□□□□□ -0.47
LMO3-210ENST00000453727 KIF3BO15066 747 aa12.13□□□□□ -0.47
LMO3-210ENST00000453727 PKD2Q13563 968 aa12.13□□□□□ -0.47
LMO3-210ENST00000453727 TIMELESSQ9UNS1 1208 aa12.13□□□□□ -0.47
LMO3-210ENST00000453727 MAGI2Q86UL8 1455 aa12.13□□□□□ -0.47
LMO3-210ENST00000453727 DIP2CQ9Y2E4 1556 aa12.12□□□□□ -0.47
LMO3-210ENST00000453727 TONSLQ96HA7 1378 aa12.12□□□□□ -0.47
LMO3-210ENST00000453727 IQGAP3Q86VI3 1631 aa12.12□□□□□ -0.47
LMO3-210ENST00000453727 EIF2AK4Q9P2K8 1649 aaKnown RBP12.11□□□□□ -0.47
LMO3-210ENST00000453727 DEPDC5O75140 1603 aa12.1□□□□□ -0.47
LMO3-210ENST00000453727 ZNF316A6NFI3 1004 aaPredicted RBP12.09□□□□□ -0.47
LMO3-210ENST00000453727 RPRD2Q5VT52 1461 aaKnown RBP12.09□□□□□ -0.47
LMO3-210ENST00000453727 PPP1R15AO75807 674 aaPredicted RBP12.09□□□□□ -0.47
LMO3-210ENST00000453727 GGT6Q6P531 493 aa12.07□□□□□ -0.48
LMO3-210ENST00000453727 SUPT16HQ9Y5B9 1047 aaKnown RBP12.07□□□□□ -0.48
LMO3-210ENST00000453727 ATP10AO60312 1499 aa12.07□□□□□ -0.48
LMO3-210ENST00000453727 KANK1Q14678 1352 aa12.07□□□□□ -0.48
LMO3-210ENST00000453727 PRDM15P57071 1507 aaPredicted RBP12.06□□□□□ -0.48
LMO3-210ENST00000453727 MROH1Q8NDA8 1641 aa12.06□□□□□ -0.48
LMO3-210ENST00000453727 BCORL1Q5H9F3 1711 aa12.05□□□□□ -0.48
LMO3-210ENST00000453727 RNF17Q9BXT8 1623 aaKnown RBP12.05□□□□□ -0.48
LMO3-210ENST00000453727 VWDEQ8N2E2 1590 aa12.05□□□□□ -0.48
LMO3-210ENST00000453727 ARHGEF40Q8TER5 1519 aa12.04□□□□□ -0.48
LMO3-210ENST00000453727 L3MBTL2Q969R5 705 aa12.04□□□□□ -0.48
LMO3-210ENST00000453727 E9PCH4 1651 aa12.03□□□□□ -0.48
LMO3-210ENST00000453727 REREQ9P2R6 1566 aa12.03□□□□□ -0.48
LMO3-210ENST00000453727 MIER1Q8N108 512 aa12.02□□□□□ -0.48
LMO3-210ENST00000453727 PLA2R1Q13018 1463 aa12.02□□□□□ -0.49
LMO3-210ENST00000453727 TET3O43151 1660 aa12.02□□□□□ -0.49
LMO3-210ENST00000453727 WASHC2CQ9Y4E1 1318 aa12.02□□□□□ -0.49
LMO3-210ENST00000453727 AGLP35573 1532 aa12□□□□□ -0.49
LMO3-210ENST00000453727 CEP152O94986 1710 aa12□□□□□ -0.49
LMO3-210ENST00000453727 SIGLEC1Q9BZZ2 1709 aa12□□□□□ -0.49
LMO3-210ENST00000453727 LMTK2Q8IWU2 1503 aa11.99□□□□□ -0.49
LMO3-210ENST00000453727 CCDC144AA2RUR9 1427 aa11.99□□□□□ -0.49
LMO3-210ENST00000453727 ABCC3O15438 1527 aa11.98□□□□□ -0.49
LMO3-210ENST00000453727 EFCAB6Q5THR3 1501 aa11.98□□□□□ -0.49
LMO3-210ENST00000453727 MLECQ14165 292 aa11.98□□□□□ -0.49
LMO3-210ENST00000453727 SPHKAPQ2M3C7 1700 aa11.97□□□□□ -0.49
LMO3-210ENST00000453727 ARID4BQ4LE39 1312 aaPredicted RBP11.97□□□□□ -0.49
LMO3-210ENST00000453727 NBPF8Q3BBV2 869 aa11.96□□□□□ -0.5
LMO3-210ENST00000453727 NPATQ14207 1427 aa11.95□□□□□ -0.5
LMO3-210ENST00000453727 TRPM2O94759 1503 aa11.95□□□□□ -0.5
LMO3-210ENST00000453727 ZC3H13Q5T200 1668 aaKnown RBP11.95□□□□□ -0.5
LMO3-210ENST00000453727 PTPRTO14522 1441 aa11.95□□□□□ -0.5
LMO3-210ENST00000453727 PPP6R1Q9UPN7 881 aa11.95□□□□□ -0.5
LMO3-210ENST00000453727 CAMSAP1Q5T5Y3 1602 aa11.94□□□□□ -0.5
LMO3-210ENST00000453727 CFAP65Q6ZU64 1925 aaKnown RBP11.93□□□□□ -0.5
LMO3-210ENST00000453727 CLTCL1P53675 1640 aa11.93□□□□□ -0.5
LMO3-210ENST00000453727 RGL3Q3MIN7 710 aa11.91□□□□□ -0.5
LMO3-210ENST00000453727 ESF1Q9H501 851 aaKnown RBP11.91□□□□□ -0.5
LMO3-210ENST00000453727 ARHGAP31Q2M1Z3 1444 aa11.91□□□□□ -0.5
LMO3-210ENST00000453727 DCAF11Q8TEB1 546 aa11.91□□□□□ -0.5
LMO3-210ENST00000453727 HIRIP3Q9BW71 556 aaPredicted RBP11.91□□□□□ -0.5
LMO3-210ENST00000453727 ZNF326Q5BKZ1 582 aaKnown RBP11.9□□□□□ -0.5
LMO3-210ENST00000453727 CLTCQ00610 1675 aaKnown RBP11.9□□□□□ -0.5
LMO3-210ENST00000453727 UHRF1BP1Q6BDS2 1440 aa11.9□□□□□ -0.5
LMO3-210ENST00000453727 UGGT1Q9NYU2 1555 aa11.9□□□□□ -0.5
LMO3-210ENST00000453727 KDM2AQ9Y2K7 1162 aa11.9□□□□□ -0.5
LMO3-210ENST00000453727 SPATA31E1Q6ZUB1 1445 aa11.9□□□□□ -0.5
LMO3-210ENST00000453727 CNTLNQ9NXG0 1405 aa11.89□□□□□ -0.51
LMO3-210ENST00000453727 NOS1P29475 1434 aa11.88□□□□□ -0.51
LMO3-210ENST00000453727 ANO8Q9HCE9 1232 aaPredicted RBP11.88□□□□□ -0.51
LMO3-210ENST00000453727 FBXO31Q5XUX0 539 aaPredicted RBP11.87□□□□□ -0.51
LMO3-210ENST00000453727 KIF1BO60333 1816 aa11.86□□□□□ -0.51
LMO3-210ENST00000453727 ZMYM3Q14202 1370 aa11.86□□□□□ -0.51
LMO3-210ENST00000453727 HSPA5P11021 654 aaKnown RBP11.86□□□□□ -0.51
LMO3-210ENST00000453727 PREX1Q8TCU6 1659 aa11.85□□□□□ -0.51
LMO3-210ENST00000453727 RALGAPBQ86X10 1494 aa11.85□□□□□ -0.51
LMO3-210ENST00000453727 EIF4G2P78344 907 aaKnown RBP eCLIP11.85□□□□□ -0.51
LMO3-210ENST00000453727 PRAG1Q86YV5 1406 aa11.85□□□□□ -0.51
LMO3-210ENST00000453727 SYNMO15061 1565 aa11.85□□□□□ -0.51
LMO3-210ENST00000453727 MROH2AA6NES4 1674 aa11.85□□□□□ -0.51
LMO3-210ENST00000453727 RBM19Q9Y4C8 960 aaKnown RBP11.85□□□□□ -0.51
LMO3-210ENST00000453727 NEURL4Q96JN8 1562 aa11.85□□□□□ -0.51
LMO3-210ENST00000453727 CHGAP10645 457 aaKnown RBP11.84□□□□□ -0.51
LMO3-210ENST00000453727 TRPM1Q7Z4N2 1603 aa11.84□□□□□ -0.51
LMO3-210ENST00000453727 ERVK-7P63135 1459 aa11.84□□□□□ -0.51
LMO3-210ENST00000453727 SLC52A1Q9NWF4 448 aa11.84□□□□□ -0.51
LMO3-210ENST00000453727 IDI1Q13907 227 aa11.83□□□□□ -0.52
LMO3-210ENST00000453727 PIK3C2BO00750 1634 aa11.82□□□□□ -0.52
LMO3-210ENST00000453727 FER1L4A9Z1Z3 1794 aa11.82□□□□□ -0.52
LMO3-210ENST00000453727 ADGRB3O60242 1522 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms