RNA–Protein interactions for RNA: ENST00000453341.1

TNFRSF25-208, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-208ENST00000453341 DHX29Q7Z478 1369 aaKnown RBP35.35■■■■□ 3.25
TNFRSF25-208ENST00000453341 TNRQ92752 1358 aa35.33■■■■□ 3.25
TNFRSF25-208ENST00000453341 MED1Q15648 1581 aaPredicted RBP35.33■■■■□ 3.25
TNFRSF25-208ENST00000453341 CPS1P31327 1500 aa35.32■■■■□ 3.25
TNFRSF25-208ENST00000453341 PIP4K2BP78356 416 aa35.32■■■■□ 3.24
TNFRSF25-208ENST00000453341 SCAF1Q9H7N4 1312 aaKnown RBP35.32■■■■□ 3.24
TNFRSF25-208ENST00000453341 SHANK2Q9UPX8 1470 aa35.3■■■■□ 3.24
TNFRSF25-208ENST00000453341 PZPP20742 1482 aa35.29■■■■□ 3.24
TNFRSF25-208ENST00000453341 EHBP1L1Q8N3D4 1523 aa35.27■■■■□ 3.24
TNFRSF25-208ENST00000453341 KDM5DQ9BY66 1539 aa35.27■■■■□ 3.24
TNFRSF25-208ENST00000453341 KIF3BO15066 747 aa35.26■■■■□ 3.24
TNFRSF25-208ENST00000453341 TOM1O60784 492 aa35.25■■■■□ 3.23
TNFRSF25-208ENST00000453341 VWDEQ8N2E2 1590 aa35.24■■■■□ 3.23
TNFRSF25-208ENST00000453341 CEP162Q5TB80 1403 aa35.23■■■■□ 3.23
TNFRSF25-208ENST00000453341 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.23■■■■□ 3.23
TNFRSF25-208ENST00000453341 FAM135AQ9P2D6 1515 aa35.22■■■■□ 3.23
TNFRSF25-208ENST00000453341 CCDC141Q6ZP82 1450 aa35.2■■■■□ 3.23
TNFRSF25-208ENST00000453341 ALKQ9UM73 1620 aa35.19■■■■□ 3.22
TNFRSF25-208ENST00000453341 ANKLE2Q86XL3 938 aa35.18■■■■□ 3.22
TNFRSF25-208ENST00000453341 MIA2Q96PC5 1412 aa35.16■■■■□ 3.22
TNFRSF25-208ENST00000453341 WASHC2CQ9Y4E1 1318 aa35.16■■■■□ 3.22
TNFRSF25-208ENST00000453341 CAMSAP2Q08AD1 1489 aa35.15■■■■□ 3.22
TNFRSF25-208ENST00000453341 MED14O60244 1454 aa35.14■■■■□ 3.22
TNFRSF25-208ENST00000453341 NLRP1Q9C000 1473 aa35.14■■■■□ 3.22
TNFRSF25-208ENST00000453341 NPHP4O75161 1426 aaPredicted RBP35.14■■■■□ 3.22
TNFRSF25-208ENST00000453341 UGGT1Q9NYU2 1555 aa35.13■■■■□ 3.21
TNFRSF25-208ENST00000453341 DEPDC5O75140 1603 aa35.13■■■■□ 3.21
TNFRSF25-208ENST00000453341 THEMISQ8N1K5 641 aaPredicted RBP35.12■■■■□ 3.21
TNFRSF25-208ENST00000453341 NCOA2Q15596 1464 aa35.08■■■■□ 3.21
TNFRSF25-208ENST00000453341 STRCP1A6NGW2 1772 aa35.06■■■■□ 3.2
TNFRSF25-208ENST00000453341 IQGAP1P46940 1657 aa35.06■■■■□ 3.2
TNFRSF25-208ENST00000453341 RSPH4AQ5TD94 716 aa35.04■■■■□ 3.2
TNFRSF25-208ENST00000453341 ARHGEF5Q12774 1597 aa35.01■■■■□ 3.2
TNFRSF25-208ENST00000453341 LRRC7Q96NW7 1537 aa34.99■■■■□ 3.19
TNFRSF25-208ENST00000453341 PHF23Q9BUL5 403 aaPredicted RBP34.98■■■■□ 3.19
TNFRSF25-208ENST00000453341 RNF17Q9BXT8 1623 aaKnown RBP34.98■■■■□ 3.19
TNFRSF25-208ENST00000453341 ABCC3O15438 1527 aa34.97■■■■□ 3.19
TNFRSF25-208ENST00000453341 SENP3Q9H4L4 574 aaPredicted RBP34.93■■■■□ 3.18
TNFRSF25-208ENST00000453341 ZC3H13Q5T200 1668 aaKnown RBP34.92■■■■□ 3.18
TNFRSF25-208ENST00000453341 SYNMO15061 1565 aa34.92■■■■□ 3.18
TNFRSF25-208ENST00000453341 ERVK-7P63135 1459 aa34.92■■■■□ 3.18
TNFRSF25-208ENST00000453341 TSPY4P0CV99 314 aa34.92■■■■□ 3.18
TNFRSF25-208ENST00000453341 TSPY10P0CW01 314 aa34.92■■■■□ 3.18
TNFRSF25-208ENST00000453341 MROH1Q8NDA8 1641 aa34.88■■■■□ 3.17
TNFRSF25-208ENST00000453341 MAST1Q9Y2H9 1570 aa34.87■■■■□ 3.17
TNFRSF25-208ENST00000453341 UBR1Q8IWV7 1749 aa34.85■■■■□ 3.17
TNFRSF25-208ENST00000453341 CFAP65Q6ZU64 1925 aaKnown RBP34.85■■■■□ 3.17
TNFRSF25-208ENST00000453341 EIF2AK4Q9P2K8 1649 aaKnown RBP34.84■■■■□ 3.17
TNFRSF25-208ENST00000453341 CEP152O94986 1710 aa34.82■■■■□ 3.16
TNFRSF25-208ENST00000453341 SCAF11Q99590 1463 aaKnown RBP34.79■■■■□ 3.16
TNFRSF25-208ENST00000453341 XIRP1Q702N8 1843 aaKnown RBP34.76■■■■□ 3.16
TNFRSF25-208ENST00000453341 LTKP29376 864 aa34.76■■■■□ 3.16
TNFRSF25-208ENST00000453341 RGS17Q9UGC6 210 aaPredicted RBP34.75■■■■□ 3.15
TNFRSF25-208ENST00000453341 ARHGAP23Q9P227 1491 aa34.75■■■■□ 3.15
TNFRSF25-208ENST00000453341 LRRC9Q6ZRR7 1453 aa34.74■■■■□ 3.15
TNFRSF25-208ENST00000453341 SLIT1O75093 1534 aa34.73■■■■□ 3.15
TNFRSF25-208ENST00000453341 TXNDC2Q86VQ3 553 aa34.68■■■■□ 3.14
TNFRSF25-208ENST00000453341 DUOX2Q9NRD8 1548 aa34.67■■■■□ 3.14
TNFRSF25-208ENST00000453341 ARHGAP31Q2M1Z3 1444 aa34.64■■■■□ 3.14
TNFRSF25-208ENST00000453341 PRDM15P57071 1507 aaPredicted RBP34.63■■■■□ 3.13
TNFRSF25-208ENST00000453341 KANK4Q5T7N3 995 aaPredicted RBP34.61■■■■□ 3.13
TNFRSF25-208ENST00000453341 PIK3C2BO00750 1634 aa34.6■■■■□ 3.13
TNFRSF25-208ENST00000453341 MYOM3Q5VTT5 1437 aa34.6■■■■□ 3.13
TNFRSF25-208ENST00000453341 VPS8Q8N3P4 1428 aa34.59■■■■□ 3.13
TNFRSF25-208ENST00000453341 FAM135BQ49AJ0 1406 aa34.57■■■■□ 3.13
TNFRSF25-208ENST00000453341 EID1Q9Y6B2 187 aa34.57■■■■□ 3.12
TNFRSF25-208ENST00000453341 KIF15Q9NS87 1388 aa34.56■■■■□ 3.12
TNFRSF25-208ENST00000453341 TMEM2Q9UHN6 1383 aa34.56■■■■□ 3.12
TNFRSF25-208ENST00000453341 ERBINQ96RT1 1412 aa34.53■■■■□ 3.12
TNFRSF25-208ENST00000453341 TMEM94Q12767 1356 aa34.52■■■■□ 3.12
TNFRSF25-208ENST00000453341 POTEAQ6S8J7 498 aa34.5■■■■□ 3.11
TNFRSF25-208ENST00000453341 CROCC2H7BZ55 1655 aa34.5■■■■□ 3.11
TNFRSF25-208ENST00000453341 MAP3K1Q13233 1512 aa34.5■■■■□ 3.11
TNFRSF25-208ENST00000453341 ABCC5O15440 1437 aa34.48■■■■□ 3.11
TNFRSF25-208ENST00000453341 RRP7BPQ9NSQ0 103 aa34.48■■■■□ 3.11
TNFRSF25-208ENST00000453341 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.47■■■■□ 3.11
TNFRSF25-208ENST00000453341 ROBO1Q9Y6N7 1651 aa34.47■■■■□ 3.11
TNFRSF25-208ENST00000453341 EFCAB6Q5THR3 1501 aa34.46■■■■□ 3.11
TNFRSF25-208ENST00000453341 KDM5AP29375 1690 aaKnown RBP34.46■■■■□ 3.11
TNFRSF25-208ENST00000453341 TET3O43151 1660 aa34.45■■■■□ 3.11
TNFRSF25-208ENST00000453341 KCNA6P17658 529 aa34.45■■■■□ 3.11
TNFRSF25-208ENST00000453341 RBM33Q96EV2 1170 aaKnown RBP34.44■■■■□ 3.1
TNFRSF25-208ENST00000453341 STAG3Q9UJ98 1225 aa34.44■■■■□ 3.1
TNFRSF25-208ENST00000453341 IDI1Q13907 227 aa34.43■■■■□ 3.1
TNFRSF25-208ENST00000453341 SLC26A8Q96RN1 970 aa34.41■■■■□ 3.1
TNFRSF25-208ENST00000453341 LMTK2Q8IWU2 1503 aa34.39■■■■□ 3.1
TNFRSF25-208ENST00000453341 PROSER2Q86WR7 435 aaPredicted RBP34.38■■■■□ 3.09
TNFRSF25-208ENST00000453341 KANK1Q14678 1352 aa34.37■■■■□ 3.09
TNFRSF25-208ENST00000453341 PTPN23Q9H3S7 1636 aa34.37■■■■□ 3.09
TNFRSF25-208ENST00000453341 DAPK1P53355 1430 aa34.36■■■■□ 3.09
TNFRSF25-208ENST00000453341 NWD1Q149M9 1564 aa34.36■■■■□ 3.09
TNFRSF25-208ENST00000453341 NKTRP30414 1462 aaKnown RBP34.33■■■■□ 3.09
TNFRSF25-208ENST00000453341 NOS1P29475 1434 aa34.32■■■■□ 3.08
TNFRSF25-208ENST00000453341 ADGRB3O60242 1522 aa34.32■■■■□ 3.08
TNFRSF25-208ENST00000453341 LOC105371045A0A1W2PR82 267 aa34.31■■■■□ 3.08
TNFRSF25-208ENST00000453341 SETD1AO15047 1707 aaKnown RBP34.29■■■■□ 3.08
TNFRSF25-208ENST00000453341 PHLPP1O60346 1717 aa34.27■■■■□ 3.08
TNFRSF25-208ENST00000453341 MSH6P52701 1360 aa34.25■■■■□ 3.07
TNFRSF25-208ENST00000453341 CHIC2Q9UKJ5 165 aa34.25■■■■□ 3.07
TNFRSF25-208ENST00000453341 SLAIN2Q9P270 581 aa34.23■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms