RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 KIF27Q86VH2 1401 aa10.71□□□□□ -0.7
SMCO1-202ENST00000452776 DDX11L8A8MPP1 907 aa10.7□□□□□ -0.7
SMCO1-202ENST00000452776 KIF20AO95235 890 aa10.7□□□□□ -0.7
SMCO1-202ENST00000452776 MCM4P33991 863 aa10.7□□□□□ -0.7
SMCO1-202ENST00000452776 SKOR2Q2VWA4 1001 aaPredicted RBP10.7□□□□□ -0.7
SMCO1-202ENST00000452776 HS1BP3Q53T59 392 aa10.7□□□□□ -0.7
SMCO1-202ENST00000452776 UPF2Q9HAU5 1272 aaKnown RBP10.7□□□□□ -0.7
SMCO1-202ENST00000452776 GTPBP4Q9BZE4 634 aaKnown RBP10.7□□□□□ -0.7
SMCO1-202ENST00000452776 DHX29Q7Z478 1369 aaKnown RBP10.7□□□□□ -0.7
SMCO1-202ENST00000452776 SPATA31E1Q6ZUB1 1445 aa10.7□□□□□ -0.7
SMCO1-202ENST00000452776 ZMYM4Q5VZL5 1548 aa10.69□□□□□ -0.7
SMCO1-202ENST00000452776 TULP1O00294 542 aaPredicted RBP10.69□□□□□ -0.7
SMCO1-202ENST00000452776 HAX1O00165 279 aa10.68□□□□□ -0.7
SMCO1-202ENST00000452776 DYNC1I1O14576 645 aa10.68□□□□□ -0.7
SMCO1-202ENST00000452776 CCDC173Q0VFZ6 552 aa10.68□□□□□ -0.7
SMCO1-202ENST00000452776 CSPP1Q1MSJ5 1256 aa10.68□□□□□ -0.7
SMCO1-202ENST00000452776 BBXQ8WY36 941 aaPredicted RBP10.68□□□□□ -0.7
SMCO1-202ENST00000452776 ANTXR1Q9H6X2 564 aa10.68□□□□□ -0.7
SMCO1-202ENST00000452776 ZMYM3Q14202 1370 aa10.68□□□□□ -0.7
SMCO1-202ENST00000452776 MYBBP1AQ9BQG0 1328 aaKnown RBP10.68□□□□□ -0.7
SMCO1-202ENST00000452776 TRAK2O60296 914 aa10.68□□□□□ -0.7
SMCO1-202ENST00000452776 DMTNQ08495 405 aa10.68□□□□□ -0.7
SMCO1-202ENST00000452776 ZSCAN30Q86W11 494 aa10.68□□□□□ -0.7
SMCO1-202ENST00000452776 IPO4Q8TEX9 1081 aaKnown RBP10.68□□□□□ -0.7
SMCO1-202ENST00000452776 MYOM3Q5VTT5 1437 aa10.67□□□□□ -0.7
SMCO1-202ENST00000452776 KIF15Q9NS87 1388 aa10.67□□□□□ -0.7
SMCO1-202ENST00000452776 MSNP26038 577 aaKnown RBP10.67□□□□□ -0.7
SMCO1-202ENST00000452776 CRBNQ96SW2 442 aa10.67□□□□□ -0.7
SMCO1-202ENST00000452776 CHMP5Q9NZZ3 219 aa10.67□□□□□ -0.7
SMCO1-202ENST00000452776 PTPN23Q9H3S7 1636 aa10.67□□□□□ -0.7
SMCO1-202ENST00000452776 BIVM-ERCC5R4GMW8 1640 aa10.67□□□□□ -0.7
SMCO1-202ENST00000452776 PLEKHH2Q8IVE3 1493 aa10.66□□□□□ -0.7
SMCO1-202ENST00000452776 MAPK8IP3Q9UPT6 1336 aa10.66□□□□□ -0.7
SMCO1-202ENST00000452776 PIP4P2Q8N4L2 257 aa10.66□□□□□ -0.7
SMCO1-202ENST00000452776 AKT1S1Q96B36 256 aa10.66□□□□□ -0.7
SMCO1-202ENST00000452776 CFAP43Q8NDM7 1665 aa10.66□□□□□ -0.7
SMCO1-202ENST00000452776 LETM1O95202 739 aaPredicted RBP10.65□□□□□ -0.7
SMCO1-202ENST00000452776 BCL11BQ9C0K0 894 aaPredicted RBP10.65□□□□□ -0.7
SMCO1-202ENST00000452776 NAIPQ13075 1403 aa10.65□□□□□ -0.7
SMCO1-202ENST00000452776 MYCNP04198 464 aaPredicted RBP10.65□□□□□ -0.71
SMCO1-202ENST00000452776 PPP1R9BQ96SB3 815 aa10.65□□□□□ -0.71
SMCO1-202ENST00000452776 NAP1L2Q9ULW6 460 aaPredicted RBP10.65□□□□□ -0.71
SMCO1-202ENST00000452776 FGD6Q6ZV73 1430 aa10.65□□□□□ -0.71
SMCO1-202ENST00000452776 MCM5P33992 734 aa10.64□□□□□ -0.71
SMCO1-202ENST00000452776 SAMD1Q6SPF0 538 aaPredicted RBP10.64□□□□□ -0.71
SMCO1-202ENST00000452776 TAOK2Q9UL54 1235 aa10.64□□□□□ -0.71
SMCO1-202ENST00000452776 SCAPERQ9BY12 1400 aa10.64□□□□□ -0.71
SMCO1-202ENST00000452776 EIF3AQ14152 1382 aaKnown RBP10.64□□□□□ -0.71
SMCO1-202ENST00000452776 L3MBTL2Q969R5 705 aa10.63□□□□□ -0.71
SMCO1-202ENST00000452776 PANK2Q9BZ23 570 aa10.63□□□□□ -0.71
SMCO1-202ENST00000452776 AQRO60306 1485 aaKnown RBP eCLIP10.63□□□□□ -0.71
SMCO1-202ENST00000452776 CCDC94Q9BW85 323 aaPredicted RBP10.62□□□□□ -0.71
SMCO1-202ENST00000452776 VGFO15240 615 aaPredicted RBP10.61□□□□□ -0.71
SMCO1-202ENST00000452776 RIPK4P57078 832 aa10.61□□□□□ -0.71
SMCO1-202ENST00000452776 FAM13BQ9NYF5 915 aa10.61□□□□□ -0.71
SMCO1-202ENST00000452776 ZNF500O60304 480 aaPredicted RBP10.61□□□□□ -0.71
SMCO1-202ENST00000452776 NLRP13Q86W25 1043 aa10.61□□□□□ -0.71
SMCO1-202ENST00000452776 FYCO1Q9BQS8 1478 aa10.6□□□□□ -0.71
SMCO1-202ENST00000452776 STAC3Q96MF2 364 aa10.6□□□□□ -0.71
SMCO1-202ENST00000452776 SLKQ9H2G2 1235 aaPredicted RBP10.6□□□□□ -0.71
SMCO1-202ENST00000452776 GTF2E1P29083 439 aaPredicted RBP10.59□□□□□ -0.71
SMCO1-202ENST00000452776 HECW1Q76N89 1606 aa10.59□□□□□ -0.71
SMCO1-202ENST00000452776 USP19O94966 1318 aa10.59□□□□□ -0.71
SMCO1-202ENST00000452776 ERBB4Q15303 1308 aa10.59□□□□□ -0.71
SMCO1-202ENST00000452776 RSPH4AQ5TD94 716 aa10.58□□□□□ -0.72
SMCO1-202ENST00000452776 KLHL34Q8N239 644 aa10.58□□□□□ -0.72
SMCO1-202ENST00000452776 GBP4Q96PP9 640 aa10.58□□□□□ -0.72
SMCO1-202ENST00000452776 CUX1P39880 1505 aa10.58□□□□□ -0.72
SMCO1-202ENST00000452776 PPP4R3BQ5MIZ7 849 aa10.58□□□□□ -0.72
SMCO1-202ENST00000452776 CIZ1Q9ULV3 898 aaPredicted RBP10.58□□□□□ -0.72
SMCO1-202ENST00000452776 CASKIN1Q8WXD9 1431 aa10.57□□□□□ -0.72
SMCO1-202ENST00000452776 MPHOSPH9Q99550 1183 aa10.57□□□□□ -0.72
SMCO1-202ENST00000452776 GZF1Q9H116 711 aaPredicted RBP10.57□□□□□ -0.72
SMCO1-202ENST00000452776 RPRD2Q5VT52 1461 aaKnown RBP10.57□□□□□ -0.72
SMCO1-202ENST00000452776 IBTKQ9P2D0 1353 aaPredicted RBP10.57□□□□□ -0.72
SMCO1-202ENST00000452776 SASS6Q6UVJ0 657 aa10.56□□□□□ -0.72
SMCO1-202ENST00000452776 TBC1D32Q96NH3 1257 aa10.56□□□□□ -0.72
SMCO1-202ENST00000452776 NOL7Q9UMY1 257 aaKnown RBP10.56□□□□□ -0.72
SMCO1-202ENST00000452776 UQCRHLA0A096LP55 91 aa10.55□□□□□ -0.72
SMCO1-202ENST00000452776 UQCRHP07919 91 aa10.55□□□□□ -0.72
SMCO1-202ENST00000452776 ZSCAN20P17040 1043 aaPredicted RBP10.55□□□□□ -0.72
SMCO1-202ENST00000452776 TBC1D2Q9BYX2 928 aa10.55□□□□□ -0.72
SMCO1-202ENST00000452776 R3HCC1Q9Y3T6 440 aaKnown RBP10.55□□□□□ -0.72
SMCO1-202ENST00000452776 PLIN1O60240 522 aa10.54□□□□□ -0.72
SMCO1-202ENST00000452776 GOLGA6L22H0YM25 854 aa10.54□□□□□ -0.72
SMCO1-202ENST00000452776 NBPF8Q3BBV2 869 aa10.54□□□□□ -0.72
SMCO1-202ENST00000452776 NINLQ9Y2I6 1382 aa10.53□□□□□ -0.72
SMCO1-202ENST00000452776 NASPP49321 788 aaPredicted RBP10.53□□□□□ -0.72
SMCO1-202ENST00000452776 RBM25P49756 843 aaKnown RBP10.53□□□□□ -0.72
SMCO1-202ENST00000452776 HMGN5P82970 282 aaKnown RBP10.53□□□□□ -0.72
SMCO1-202ENST00000452776 ZHX1Q9UKY1 873 aaPredicted RBP10.53□□□□□ -0.72
SMCO1-202ENST00000452776 PABPN1Q86U42 306 aaKnown RBP eCLIP10.52□□□□□ -0.73
SMCO1-202ENST00000452776 FTSJ3Q8IY81 847 aaKnown RBP10.52□□□□□ -0.73
SMCO1-202ENST00000452776 ANKRD30BQ9BXX2 1392 aa10.52□□□□□ -0.73
SMCO1-202ENST00000452776 PTPRKQ15262 1439 aa10.52□□□□□ -0.73
SMCO1-202ENST00000452776 VIRMAQ69YN4 1812 aaKnown RBP10.52□□□□□ -0.73
SMCO1-202ENST00000452776 CGNL1Q0VF96 1302 aa10.51□□□□□ -0.73
SMCO1-202ENST00000452776 BLMP54132 1417 aaPredicted RBP10.51□□□□□ -0.73
SMCO1-202ENST00000452776 EFCAB5A4FU69 1503 aa10.51□□□□□ -0.73
SMCO1-202ENST00000452776 USP47Q96K76 1375 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms