RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 NLRP1Q9C000 1473 aa23.9■■□□□ 1.42
PTPA-223ENST00000452489 RIPK4P57078 832 aa23.89■■□□□ 1.42
PTPA-223ENST00000452489 KDM5CP41229 1560 aa23.89■■□□□ 1.42
PTPA-223ENST00000452489 PDE4CQ08493 712 aa23.89■■□□□ 1.41
PTPA-223ENST00000452489 VIRMAQ69YN4 1812 aaKnown RBP23.89■■□□□ 1.41
PTPA-223ENST00000452489 SNAPC4Q5SXM2 1469 aa23.88■■□□□ 1.41
PTPA-223ENST00000452489 THOC2Q8NI27 1593 aaKnown RBP23.86■■□□□ 1.41
PTPA-223ENST00000452489 FAM13BQ9NYF5 915 aa23.84■■□□□ 1.41
PTPA-223ENST00000452489 SLC4A1APQ9BWU0 796 aaKnown RBP23.84■■□□□ 1.41
PTPA-223ENST00000452489 EFCAB5A4FU69 1503 aa23.83■■□□□ 1.41
PTPA-223ENST00000452489 IGHDP01880 384 aa23.83■■□□□ 1.41
PTPA-223ENST00000452489 ARID3AQ99856 593 aa23.83■■□□□ 1.41
PTPA-223ENST00000452489 MBD5Q9P267 1494 aa23.83■■□□□ 1.4
PTPA-223ENST00000452489 ZHX1Q9UKY1 873 aaPredicted RBP23.82■■□□□ 1.4
PTPA-223ENST00000452489 SUPT6HQ7KZ85 1726 aaKnown RBP23.82■■□□□ 1.4
PTPA-223ENST00000452489 BLMP54132 1417 aaPredicted RBP23.82■■□□□ 1.4
PTPA-223ENST00000452489 PARD3Q8TEW0 1356 aa23.81■■□□□ 1.4
PTPA-223ENST00000452489 LRRIQ1Q96JM4 1722 aa23.81■■□□□ 1.4
PTPA-223ENST00000452489 GAS2L3Q86XJ1 694 aa23.8■■□□□ 1.4
PTPA-223ENST00000452489 BICRAQ9NZM4 1560 aa23.8■■□□□ 1.4
PTPA-223ENST00000452489 UGGT2Q9NYU1 1516 aa23.78■■□□□ 1.4
PTPA-223ENST00000452489 DUSP27Q5VZP5 1158 aa23.78■■□□□ 1.4
PTPA-223ENST00000452489 PRDM10Q9NQV6 1147 aa23.78■■□□□ 1.4
PTPA-223ENST00000452489 ZMYM4Q5VZL5 1548 aa23.78■■□□□ 1.4
PTPA-223ENST00000452489 ST20-MTHFSA0A0A6YYL1 179 aa23.77■■□□□ 1.4
PTPA-223ENST00000452489 OFD1O75665 1012 aa23.77■■□□□ 1.4
PTPA-223ENST00000452489 TBC1D32Q96NH3 1257 aa23.77■■□□□ 1.4
PTPA-223ENST00000452489 TCOF1Q13428 1488 aaKnown RBP23.77■■□□□ 1.4
PTPA-223ENST00000452489 KIF14Q15058 1648 aa23.76■■□□□ 1.39
PTPA-223ENST00000452489 SMAP1Q8IYB5 467 aaPredicted RBP23.75■■□□□ 1.39
PTPA-223ENST00000452489 CARD11Q9BXL7 1154 aa23.75■■□□□ 1.39
PTPA-223ENST00000452489 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.75■■□□□ 1.39
PTPA-223ENST00000452489 CHMP5Q9NZZ3 219 aa23.74■■□□□ 1.39
PTPA-223ENST00000452489 ISY1Q9ULR0 285 aaKnown RBP23.73■■□□□ 1.39
PTPA-223ENST00000452489 EHBP1L1Q8N3D4 1523 aa23.73■■□□□ 1.39
PTPA-223ENST00000452489 E9PCH4 1651 aa23.72■■□□□ 1.39
PTPA-223ENST00000452489 MAP7D2Q96T17 732 aa23.72■■□□□ 1.39
PTPA-223ENST00000452489 UPF2Q9HAU5 1272 aaKnown RBP23.72■■□□□ 1.39
PTPA-223ENST00000452489 PLEKHH2Q8IVE3 1493 aa23.71■■□□□ 1.39
PTPA-223ENST00000452489 CC2D1BQ5T0F9 858 aaKnown RBP23.71■■□□□ 1.39
PTPA-223ENST00000452489 R3HCC1Q9Y3T6 440 aaKnown RBP23.71■■□□□ 1.39
PTPA-223ENST00000452489 PLEKHH1Q9ULM0 1364 aa23.71■■□□□ 1.39
PTPA-223ENST00000452489 MAPK8IP3Q9UPT6 1336 aa23.7■■□□□ 1.38
PTPA-223ENST00000452489 EIF3AQ14152 1382 aaKnown RBP23.7■■□□□ 1.38
PTPA-223ENST00000452489 ARHGEF11O15085 1522 aa23.7■■□□□ 1.38
PTPA-223ENST00000452489 ZSCAN30Q86W11 494 aa23.7■■□□□ 1.38
PTPA-223ENST00000452489 MAGI3Q5TCQ9 1506 aa23.7■■□□□ 1.38
PTPA-223ENST00000452489 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.69■■□□□ 1.38
PTPA-223ENST00000452489 BCL11BQ9C0K0 894 aaPredicted RBP23.69■■□□□ 1.38
PTPA-223ENST00000452489 DDX11L8A8MPP1 907 aa23.68■■□□□ 1.38
PTPA-223ENST00000452489 BBXQ8WY36 941 aaPredicted RBP23.66■■□□□ 1.38
PTPA-223ENST00000452489 ADAMTS8Q9UP79 889 aa23.66■■□□□ 1.38
PTPA-223ENST00000452489 TERF1P54274 439 aa23.65■■□□□ 1.38
PTPA-223ENST00000452489 GRIN2BQ13224 1484 aa23.65■■□□□ 1.38
PTPA-223ENST00000452489 BCAR3O75815 825 aa23.65■■□□□ 1.38
PTPA-223ENST00000452489 PER1O15534 1290 aaPredicted RBP23.64■■□□□ 1.38
PTPA-223ENST00000452489 MSNP26038 577 aaKnown RBP23.64■■□□□ 1.38
PTPA-223ENST00000452489 INSRP06213 1382 aa23.64■■□□□ 1.38
PTPA-223ENST00000452489 RALGAPBQ86X10 1494 aa23.64■■□□□ 1.37
PTPA-223ENST00000452489 UQCRHLA0A096LP55 91 aa23.63■■□□□ 1.37
PTPA-223ENST00000452489 UQCRHP07919 91 aa23.63■■□□□ 1.37
PTPA-223ENST00000452489 CCDC173Q0VFZ6 552 aa23.63■■□□□ 1.37
PTPA-223ENST00000452489 ZNF608Q9ULD9 1512 aaPredicted RBP23.62■■□□□ 1.37
PTPA-223ENST00000452489 GOLGA2Q08379 1002 aa23.61■■□□□ 1.37
PTPA-223ENST00000452489 PPP1R9BQ96SB3 815 aa23.61■■□□□ 1.37
PTPA-223ENST00000452489 GTF2E1P29083 439 aaPredicted RBP23.61■■□□□ 1.37
PTPA-223ENST00000452489 ZNF692Q9BU19 519 aaPredicted RBP23.61■■□□□ 1.37
PTPA-223ENST00000452489 PZPP20742 1482 aa23.59■■□□□ 1.37
PTPA-223ENST00000452489 DMTNQ08495 405 aa23.59■■□□□ 1.37
PTPA-223ENST00000452489 ZNF521Q96K83 1311 aa23.58■■□□□ 1.37
PTPA-223ENST00000452489 NASPP49321 788 aaPredicted RBP23.58■■□□□ 1.36
PTPA-223ENST00000452489 KDM2AQ9Y2K7 1162 aa23.57■■□□□ 1.36
PTPA-223ENST00000452489 CLUAP1Q96AJ1 413 aa23.56■■□□□ 1.36
PTPA-223ENST00000452489 XPCQ01831 940 aaPredicted RBP23.55■■□□□ 1.36
PTPA-223ENST00000452489 SLFN5Q08AF3 891 aa23.55■■□□□ 1.36
PTPA-223ENST00000452489 UHRF1BP1Q6BDS2 1440 aa23.55■■□□□ 1.36
PTPA-223ENST00000452489 SPINK5Q9NQ38 1064 aaPredicted RBP23.55■■□□□ 1.36
PTPA-223ENST00000452489 UTP14CQ5TAP6 766 aaKnown RBP23.54■■□□□ 1.36
PTPA-223ENST00000452489 TNPO1Q92973 898 aaKnown RBP23.54■■□□□ 1.36
PTPA-223ENST00000452489 ZSCAN20P17040 1043 aaPredicted RBP23.54■■□□□ 1.36
PTPA-223ENST00000452489 CTTNBP2Q8WZ74 1663 aa23.53■■□□□ 1.36
PTPA-223ENST00000452489 PDIA4P13667 645 aaKnown RBP23.53■■□□□ 1.36
PTPA-223ENST00000452489 STAC3Q96MF2 364 aa23.53■■□□□ 1.36
PTPA-223ENST00000452489 COG6Q9Y2V7 657 aa23.53■■□□□ 1.36
PTPA-223ENST00000452489 RTEL1-TNFRSF6BF6WH68 1400 aa23.53■■□□□ 1.36
PTPA-223ENST00000452489 ROCK1Q13464 1354 aa23.52■■□□□ 1.36
PTPA-223ENST00000452489 KIF21AQ7Z4S6 1674 aa23.52■■□□□ 1.36
PTPA-223ENST00000452489 DAPK1P53355 1430 aa23.52■■□□□ 1.36
PTPA-223ENST00000452489 PANK1Q8TE04 598 aa23.52■■□□□ 1.36
PTPA-223ENST00000452489 C22orf23Q9BZE7 217 aa23.52■■□□□ 1.35
PTPA-223ENST00000452489 MTERF4Q7Z6M4 381 aaKnown RBP23.51■■□□□ 1.35
PTPA-223ENST00000452489 KIAA1107Q9UPP5 1409 aa23.51■■□□□ 1.35
PTPA-223ENST00000452489 MFAP1P55081 439 aaKnown RBP23.5■■□□□ 1.35
PTPA-223ENST00000452489 PKD2Q13563 968 aa23.5■■□□□ 1.35
PTPA-223ENST00000452489 CGNL1Q0VF96 1302 aa23.49■■□□□ 1.35
PTPA-223ENST00000452489 DYNC1I1O14576 645 aa23.49■■□□□ 1.35
PTPA-223ENST00000452489 DDIT3P35638 169 aa23.49■■□□□ 1.35
PTPA-223ENST00000452489 ANP32BQ92688 251 aaKnown RBP23.49■■□□□ 1.35
PTPA-223ENST00000452489 HSCBQ8IWL3 235 aa23.48■■□□□ 1.35
PTPA-223ENST00000452489 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms