RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 CEP170Q5SW79 1584 aa14.84□□□□□ -0.03
DDR1-239ENST00000452441 ESF1Q9H501 851 aaKnown RBP14.83□□□□□ -0.03
DDR1-239ENST00000452441 RGS3P49796 1198 aa14.83□□□□□ -0.04
DDR1-239ENST00000452441 SPAG9O60271 1321 aaKnown RBP14.83□□□□□ -0.04
DDR1-239ENST00000452441 NBPF1Q3BBV0 1214 aa14.83□□□□□ -0.04
DDR1-239ENST00000452441 USP47Q96K76 1375 aa14.82□□□□□ -0.04
DDR1-239ENST00000452441 CYB5RLQ6IPT4 315 aa14.82□□□□□ -0.04
DDR1-239ENST00000452441 STK26Q9P289 416 aa14.82□□□□□ -0.04
DDR1-239ENST00000452441 TROQ12816 1431 aaPredicted RBP14.82□□□□□ -0.04
DDR1-239ENST00000452441 GPATCH8Q9UKJ3 1502 aaKnown RBP14.82□□□□□ -0.04
DDR1-239ENST00000452441 RTN4Q9NQC3 1192 aaKnown RBP14.81□□□□□ -0.04
DDR1-239ENST00000452441 PPM1GO15355 546 aaPredicted RBP14.81□□□□□ -0.04
DDR1-239ENST00000452441 KNSTRNQ9Y448 316 aa14.81□□□□□ -0.04
DDR1-239ENST00000452441 CCDC146Q8IYE0 955 aa14.8□□□□□ -0.04
DDR1-239ENST00000452441 SPATA31E1Q6ZUB1 1445 aa14.8□□□□□ -0.04
DDR1-239ENST00000452441 CDCA7LQ96GN5 454 aa14.79□□□□□ -0.04
DDR1-239ENST00000452441 EXOC6Q8TAG9 804 aa14.79□□□□□ -0.04
DDR1-239ENST00000452441 ARID4BQ4LE39 1312 aaPredicted RBP14.77□□□□□ -0.04
DDR1-239ENST00000452441 TMF1P82094 1093 aa14.76□□□□□ -0.05
DDR1-239ENST00000452441 PANK3Q9H999 370 aa14.76□□□□□ -0.05
DDR1-239ENST00000452441 NUDCQ9Y266 331 aa14.75□□□□□ -0.05
DDR1-239ENST00000452441 CCDC144AA2RUR9 1427 aa14.75□□□□□ -0.05
DDR1-239ENST00000452441 FRAT1Q92837 279 aaPredicted RBP14.74□□□□□ -0.05
DDR1-239ENST00000452441 SLC4A3P48751 1232 aa14.74□□□□□ -0.05
DDR1-239ENST00000452441 RCAN3Q9UKA8 241 aa14.74□□□□□ -0.05
DDR1-239ENST00000452441 SYNJ2O15056 1496 aa14.74□□□□□ -0.05
DDR1-239ENST00000452441 BCORL1Q5H9F3 1711 aa14.74□□□□□ -0.05
DDR1-239ENST00000452441 NOP58Q9Y2X3 529 aaKnown RBP14.73□□□□□ -0.05
DDR1-239ENST00000452441 C9orf84Q5VXU9 1444 aa14.73□□□□□ -0.05
DDR1-239ENST00000452441 SOX12O15370 315 aa14.73□□□□□ -0.05
DDR1-239ENST00000452441 KIAA1107Q9UPP5 1409 aa14.73□□□□□ -0.05
DDR1-239ENST00000452441 MAGI1Q96QZ7 1491 aaPredicted RBP14.72□□□□□ -0.05
DDR1-239ENST00000452441 MBD5Q9P267 1494 aa14.71□□□□□ -0.05
DDR1-239ENST00000452441 DHX29Q7Z478 1369 aaKnown RBP14.71□□□□□ -0.06
DDR1-239ENST00000452441 RSPH4AQ5TD94 716 aa14.7□□□□□ -0.06
DDR1-239ENST00000452441 PAK3O75914 559 aaPredicted RBP14.7□□□□□ -0.06
DDR1-239ENST00000452441 ATP10BO94823 1461 aa14.7□□□□□ -0.06
DDR1-239ENST00000452441 ARHGAP5Q13017 1502 aa14.7□□□□□ -0.06
DDR1-239ENST00000452441 TRAK1Q9UPV9 953 aa14.69□□□□□ -0.06
DDR1-239ENST00000452441 RRP7AQ9Y3A4 280 aaKnown RBP14.68□□□□□ -0.06
DDR1-239ENST00000452441 ADGBQ8N7X0 1667 aa14.68□□□□□ -0.06
DDR1-239ENST00000452441 ITSN2Q9NZM3 1697 aa14.68□□□□□ -0.06
DDR1-239ENST00000452441 DEKP35659 375 aaKnown RBP14.68□□□□□ -0.06
DDR1-239ENST00000452441 CROCC2H7BZ55 1655 aa14.68□□□□□ -0.06
DDR1-239ENST00000452441 ADGRL2O95490 1459 aa14.68□□□□□ -0.06
DDR1-239ENST00000452441 NUP160Q12769 1436 aa14.68□□□□□ -0.06
DDR1-239ENST00000452441 NUTM2FA1L443 756 aa14.68□□□□□ -0.06
DDR1-239ENST00000452441 SMG6Q86US8 1419 aaKnown RBP14.67□□□□□ -0.06
DDR1-239ENST00000452441 CDC42BPAQ5VT25 1732 aa14.67□□□□□ -0.06
DDR1-239ENST00000452441 KANK1Q14678 1352 aa14.67□□□□□ -0.06
DDR1-239ENST00000452441 ABCC10Q5T3U5 1492 aa14.66□□□□□ -0.06
DDR1-239ENST00000452441 ADCY10Q96PN6 1610 aa14.66□□□□□ -0.06
DDR1-239ENST00000452441 PNISRQ8TF01 805 aaKnown RBP14.66□□□□□ -0.06
DDR1-239ENST00000452441 KTN1Q86UP2 1357 aaKnown RBP14.65□□□□□ -0.06
DDR1-239ENST00000452441 ZBTB7CA1YPR0 619 aa14.65□□□□□ -0.06
DDR1-239ENST00000452441 BCL2L13Q9BXK5 485 aa14.65□□□□□ -0.06
DDR1-239ENST00000452441 NEFMP07197 916 aa14.64□□□□□ -0.07
DDR1-239ENST00000452441 WASHC2CQ9Y4E1 1318 aa14.64□□□□□ -0.07
DDR1-239ENST00000452441 ABCA8O94911 1581 aa14.64□□□□□ -0.07
DDR1-239ENST00000452441 OSCARQ8IYS5 282 aa14.64□□□□□ -0.07
DDR1-239ENST00000452441 CLUAP1Q96AJ1 413 aa14.63□□□□□ -0.07
DDR1-239ENST00000452441 KDM5CP41229 1560 aa14.63□□□□□ -0.07
DDR1-239ENST00000452441 POGKQ9P215 609 aa14.63□□□□□ -0.07
DDR1-239ENST00000452441 NLRP13Q86W25 1043 aa14.62□□□□□ -0.07
DDR1-239ENST00000452441 SPRYD3Q8NCJ5 442 aa14.62□□□□□ -0.07
DDR1-239ENST00000452441 CRBNQ96SW2 442 aa14.62□□□□□ -0.07
DDR1-239ENST00000452441 POLR1AO95602 1720 aaPredicted RBP14.62□□□□□ -0.07
DDR1-239ENST00000452441 TRHP20396 242 aaPredicted RBP14.62□□□□□ -0.07
DDR1-239ENST00000452441 TMEM132EQ6IEE7 984 aa14.62□□□□□ -0.07
DDR1-239ENST00000452441 U2SURPO15042 1029 aaKnown RBP14.62□□□□□ -0.07
DDR1-239ENST00000452441 SRPK2P78362 688 aaKnown RBP14.61□□□□□ -0.07
DDR1-239ENST00000452441 CDCA8Q53HL2 280 aa14.61□□□□□ -0.07
DDR1-239ENST00000452441 CFAP70Q5T0N1 1121 aa14.61□□□□□ -0.07
DDR1-239ENST00000452441 C14orf37Q86TY3 774 aa14.6□□□□□ -0.07
DDR1-239ENST00000452441 MYBBP1AQ9BQG0 1328 aaKnown RBP14.6□□□□□ -0.07
DDR1-239ENST00000452441 ADAMTS8Q9UP79 889 aa14.6□□□□□ -0.07
DDR1-239ENST00000452441 SCAPERQ9BY12 1400 aa14.59□□□□□ -0.07
DDR1-239ENST00000452441 RAPGEF3O95398 923 aa14.59□□□□□ -0.07
DDR1-239ENST00000452441 RRP1P56182 461 aaKnown RBP14.59□□□□□ -0.07
DDR1-239ENST00000452441 IPO9Q96P70 1041 aaKnown RBP14.59□□□□□ -0.07
DDR1-239ENST00000452441 RALBP1Q15311 655 aa14.59□□□□□ -0.07
DDR1-239ENST00000452441 APAF1O14727 1248 aa14.58□□□□□ -0.08
DDR1-239ENST00000452441 RALGAPBQ86X10 1494 aa14.57□□□□□ -0.08
DDR1-239ENST00000452441 MORC1Q86VD1 984 aa14.56□□□□□ -0.08
DDR1-239ENST00000452441 UHRF1BP1Q6BDS2 1440 aa14.56□□□□□ -0.08
DDR1-239ENST00000452441 SAMD9LQ8IVG5 1584 aa14.55□□□□□ -0.08
DDR1-239ENST00000452441 SHANK2Q9UPX8 1470 aa14.54□□□□□ -0.08
DDR1-239ENST00000452441 C20orf194Q5TEA3 1177 aa14.54□□□□□ -0.08
DDR1-239ENST00000452441 RNF123Q5XPI4 1314 aa14.54□□□□□ -0.08
DDR1-239ENST00000452441 PDE4AP27815 886 aa14.54□□□□□ -0.08
DDR1-239ENST00000452441 PLEKHH2Q8IVE3 1493 aa14.54□□□□□ -0.08
DDR1-239ENST00000452441 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.53□□□□□ -0.08
DDR1-239ENST00000452441 CDC42BPBQ9Y5S2 1711 aa14.52□□□□□ -0.08
DDR1-239ENST00000452441 EIF5BO60841 1220 aaKnown RBP14.52□□□□□ -0.09
DDR1-239ENST00000452441 BRD4O60885 1362 aaPredicted RBP14.51□□□□□ -0.09
DDR1-239ENST00000452441 FAM135AQ9P2D6 1515 aa14.51□□□□□ -0.09
DDR1-239ENST00000452441 ERCC6L2Q5T890 1561 aa14.51□□□□□ -0.09
DDR1-239ENST00000452441 SYCP2Q9BX26 1530 aa14.51□□□□□ -0.09
DDR1-239ENST00000452441 KDM5DQ9BY66 1539 aa14.5□□□□□ -0.09
DDR1-239ENST00000452441 PLA2R1Q13018 1463 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms