RNA–Protein interactions for RNA: ENST00000452034.5

KDM3A-206, Transcript of lysine demethylase 3A, humanhuman

TSL 5

Gene KDM3A, Length 709 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-206ENST00000452034 RIMS1Q86UR5 1692 aaKnown RBP23.28■■□□□ 1.32
KDM3A-206ENST00000452034 NAIPQ13075 1403 aa23.26■■□□□ 1.31
KDM3A-206ENST00000452034 HFM1A2PYH4 1435 aa23.25■■□□□ 1.31
KDM3A-206ENST00000452034 DEPDC5O75140 1603 aa23.24■■□□□ 1.31
KDM3A-206ENST00000452034 CLTCQ00610 1675 aaKnown RBP23.23■■□□□ 1.31
KDM3A-206ENST00000452034 PRDM15P57071 1507 aaPredicted RBP23.21■■□□□ 1.31
KDM3A-206ENST00000452034 CEP152O94986 1710 aa23.19■■□□□ 1.3
KDM3A-206ENST00000452034 UNC13BO14795 1591 aa23.18■■□□□ 1.3
KDM3A-206ENST00000452034 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.18■■□□□ 1.36e-8■□□□□ 10
KDM3A-206ENST00000452034 KDM5DQ9BY66 1539 aa23.18■■□□□ 1.3
KDM3A-206ENST00000452034 PTPRMP28827 1452 aa23.16■■□□□ 1.3
KDM3A-206ENST00000452034 ABCC3O15438 1527 aa23.15■■□□□ 1.3
KDM3A-206ENST00000452034 MROH2AA6NES4 1674 aa23.14■■□□□ 1.29
KDM3A-206ENST00000452034 ZC3H13Q5T200 1668 aaKnown RBP23.14■■□□□ 1.29
KDM3A-206ENST00000452034 TRIM26Q12899 539 aaPredicted RBP23.14■■□□□ 1.29
KDM3A-206ENST00000452034 PLPPR3Q6T4P5 718 aa23.14■■□□□ 1.29
KDM3A-206ENST00000452034 VWDEQ8N2E2 1590 aa23.14■■□□□ 1.29
KDM3A-206ENST00000452034 C3P01024 1663 aa23.13■■□□□ 1.29
KDM3A-206ENST00000452034 ESF1Q9H501 851 aaKnown RBP23.13■■□□□ 1.29
KDM3A-206ENST00000452034 WASHC2CQ9Y4E1 1318 aa23.12■■□□□ 1.29
KDM3A-206ENST00000452034 CNTLNQ9NXG0 1405 aa23.12■■□□□ 1.29
KDM3A-206ENST00000452034 FAM135AQ9P2D6 1515 aa23.12■■□□□ 1.29
KDM3A-206ENST00000452034 SETD5Q9C0A6 1442 aa23.11■■□□□ 1.29
KDM3A-206ENST00000452034 CAMSAP1Q5T5Y3 1602 aa23.11■■□□□ 1.29
KDM3A-206ENST00000452034 CEBPAP49715 358 aaPredicted RBP23.1■■□□□ 1.29
KDM3A-206ENST00000452034 AEBP2Q6ZN18 517 aaPredicted RBP23.1■■□□□ 1.29
KDM3A-206ENST00000452034 PPP6R1Q9UPN7 881 aa23.09■■□□□ 1.29
KDM3A-206ENST00000452034 KANK1Q14678 1352 aa23.09■■□□□ 1.29
KDM3A-206ENST00000452034 IQGAP3Q86VI3 1631 aa23.08■■□□□ 1.29
KDM3A-206ENST00000452034 ZMYM3Q14202 1370 aa23.07■■□□□ 1.28
KDM3A-206ENST00000452034 RAB3GAP2Q9H2M9 1393 aa23.07■■□□□ 1.28
KDM3A-206ENST00000452034 NUP155O75694 1391 aa23.06■■□□□ 1.28
KDM3A-206ENST00000452034 LMTK2Q8IWU2 1503 aa23.06■■□□□ 1.28
KDM3A-206ENST00000452034 TET3O43151 1660 aa23.03■■□□□ 1.28
KDM3A-206ENST00000452034 EFCAB6Q5THR3 1501 aa23.03■■□□□ 1.28
KDM3A-206ENST00000452034 TRIM52Q96A61 297 aa23.02■■□□□ 1.28
KDM3A-206ENST00000452034 PZPP20742 1482 aa23.01■■□□□ 1.27
KDM3A-206ENST00000452034 CFAP65Q6ZU64 1925 aaKnown RBP23■■□□□ 1.27
KDM3A-206ENST00000452034 E9PCH4 1651 aa22.99■■□□□ 1.27
KDM3A-206ENST00000452034 NPATQ14207 1427 aa22.99■■□□□ 1.27
KDM3A-206ENST00000452034 FBXO31Q5XUX0 539 aaPredicted RBP22.98■■□□□ 1.27
KDM3A-206ENST00000452034 PREX1Q8TCU6 1659 aa22.97■■□□□ 1.27
KDM3A-206ENST00000452034 ARHGAP31Q2M1Z3 1444 aa22.96■■□□□ 1.27
KDM3A-206ENST00000452034 ERVK-7P63135 1459 aa22.94■■□□□ 1.26
KDM3A-206ENST00000452034 PCGF6Q9BYE7 350 aa22.93■■□□□ 1.26
KDM3A-206ENST00000452034 SPATA31D1Q6ZQQ2 1576 aa22.93■■□□□ 1.26
KDM3A-206ENST00000452034 MYO3AQ8NEV4 1616 aa22.91■■□□□ 1.26
KDM3A-206ENST00000452034 TNRQ92752 1358 aa22.89■■□□□ 1.26
KDM3A-206ENST00000452034 SLC4A1APQ9BWU0 796 aaKnown RBP22.89■■□□□ 1.25
KDM3A-206ENST00000452034 RPRD2Q5VT52 1461 aaKnown RBP22.89■■□□□ 1.25
KDM3A-206ENST00000452034 SYNMO15061 1565 aa22.89■■□□□ 1.25
KDM3A-206ENST00000452034 HRCP23327 699 aa22.86■■□□□ 1.25
KDM3A-206ENST00000452034 PKD2Q13563 968 aa22.86■■□□□ 1.25
KDM3A-206ENST00000452034 MPHOSPH9Q99550 1183 aa22.86■■□□□ 1.25
KDM3A-206ENST00000452034 SPHKAPQ2M3C7 1700 aa22.85■■□□□ 1.25
KDM3A-206ENST00000452034 NOS1P29475 1434 aa22.85■■□□□ 1.25
KDM3A-206ENST00000452034 FOXD1Q16676 465 aa22.85■■□□□ 1.25
KDM3A-206ENST00000452034 SETD1BQ9UPS6 1966 aaKnown RBP22.84■■□□□ 1.25
KDM3A-206ENST00000452034 UGGT1Q9NYU2 1555 aa22.84■■□□□ 1.25
KDM3A-206ENST00000452034 LMTK3Q96Q04 1460 aa22.83■■□□□ 1.25
KDM3A-206ENST00000452034 UHRF1BP1Q6BDS2 1440 aa22.82■■□□□ 1.24
KDM3A-206ENST00000452034 ZNF142P52746 1687 aaPredicted RBP22.82■■□□□ 1.24
KDM3A-206ENST00000452034 ACIN1Q9UKV3 1341 aaKnown RBP22.82■■□□□ 1.24
KDM3A-206ENST00000452034 CEP170BQ9Y4F5 1589 aaPredicted RBP22.81■■□□□ 1.24
KDM3A-206ENST00000452034 PIK3C2BO00750 1634 aa22.79■■□□□ 1.24
KDM3A-206ENST00000452034 PTPRTO14522 1441 aa22.78■■□□□ 1.24
KDM3A-206ENST00000452034 A2ML1A8K2U0 1454 aa22.78■■□□□ 1.24
KDM3A-206ENST00000452034 PLA2R1Q13018 1463 aa22.78■■□□□ 1.24
KDM3A-206ENST00000452034 NLRP1Q9C000 1473 aa22.78■■□□□ 1.24
KDM3A-206ENST00000452034 TRPM2O94759 1503 aa22.77■■□□□ 1.24
KDM3A-206ENST00000452034 CLTCL1P53675 1640 aa22.76■■□□□ 1.23
KDM3A-206ENST00000452034 HSPA2P54652 639 aa22.74■■□□□ 1.23
KDM3A-206ENST00000452034 UBR1Q8IWV7 1749 aa22.74■■□□□ 1.23
KDM3A-206ENST00000452034 IDI1Q13907 227 aa22.73■■□□□ 1.23
KDM3A-206ENST00000452034 MYO5BQ9ULV0 1848 aa22.71■■□□□ 1.23
KDM3A-206ENST00000452034 ADGRB3O60242 1522 aa22.71■■□□□ 1.23
KDM3A-206ENST00000452034 DHX57Q6P158 1386 aaKnown RBP22.69■■□□□ 1.22
KDM3A-206ENST00000452034 SLC52A1Q9NWF4 448 aa22.68■■□□□ 1.22
KDM3A-206ENST00000452034 TMEM131LA2VDJ0 1609 aa22.68■■□□□ 1.22
KDM3A-206ENST00000452034 KDM5AP29375 1690 aaKnown RBP22.66■■□□□ 1.22
KDM3A-206ENST00000452034 CHGAP10645 457 aaKnown RBP22.65■■□□□ 1.22
KDM3A-206ENST00000452034 ANKRD30BQ9BXX2 1392 aa22.64■■□□□ 1.22
KDM3A-206ENST00000452034 KIF1BO60333 1816 aa22.64■■□□□ 1.22
KDM3A-206ENST00000452034 STAG3Q9UJ98 1225 aa22.64■■□□□ 1.21
KDM3A-206ENST00000452034 CCDC144AA2RUR9 1427 aa22.64■■□□□ 1.21
KDM3A-206ENST00000452034 STRCQ7RTU9 1775 aa22.61■■□□□ 1.21
KDM3A-206ENST00000452034 THEMISQ8N1K5 641 aaPredicted RBP22.6■■□□□ 1.21
KDM3A-206ENST00000452034 POLR1AO95602 1720 aaPredicted RBP22.59■■□□□ 1.21
KDM3A-206ENST00000452034 ARHGAP23Q9P227 1491 aa22.58■■□□□ 1.2
KDM3A-206ENST00000452034 SLIT1O75093 1534 aa22.57■■□□□ 1.2
KDM3A-206ENST00000452034 NCKAP5LQ9HCH0 1330 aa22.57■■□□□ 1.2
KDM3A-206ENST00000452034 TMEM2Q9UHN6 1383 aa22.56■■□□□ 1.2
KDM3A-206ENST00000452034 NEURL4Q96JN8 1562 aa22.55■■□□□ 1.2
KDM3A-206ENST00000452034 SPATA31E1Q6ZUB1 1445 aa22.54■■□□□ 1.2
KDM3A-206ENST00000452034 ZNF326Q5BKZ1 582 aaKnown RBP22.53■■□□□ 1.2
KDM3A-206ENST00000452034 ZFYVE9O95405 1425 aa22.53■■□□□ 1.2
KDM3A-206ENST00000452034 RIMS2Q9UQ26 1411 aa22.53■■□□□ 1.2
KDM3A-206ENST00000452034 NEXMIFQ5QGS0 1516 aa22.52■■□□□ 1.19
KDM3A-206ENST00000452034 LTKP29376 864 aa22.51■■□□□ 1.19
KDM3A-206ENST00000452034 NUTM2DQ5VT03 806 aaPredicted RBP22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms