RNA–Protein interactions for RNA: ENST00000452034.5

KDM3A-206, Transcript of lysine demethylase 3A, humanhuman

TSL 5

Gene KDM3A, Length 709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-206ENST00000452034 RIMS1Q86UR5 1692 aaKnown RBP23.28■■□□□ 1.32
KDM3A-206ENST00000452034 NAIPQ13075 1403 aa23.26■■□□□ 1.31
KDM3A-206ENST00000452034 HFM1A2PYH4 1435 aa23.25■■□□□ 1.31
KDM3A-206ENST00000452034 DEPDC5O75140 1603 aa23.24■■□□□ 1.31
KDM3A-206ENST00000452034 CLTCQ00610 1675 aaKnown RBP23.23■■□□□ 1.31
KDM3A-206ENST00000452034 PRDM15P57071 1507 aaPredicted RBP23.21■■□□□ 1.31
KDM3A-206ENST00000452034 CEP152O94986 1710 aa23.19■■□□□ 1.3
KDM3A-206ENST00000452034 UNC13BO14795 1591 aa23.18■■□□□ 1.3
KDM3A-206ENST00000452034 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.18■■□□□ 1.36e-8■□□□□ 10
KDM3A-206ENST00000452034 KDM5DQ9BY66 1539 aa23.18■■□□□ 1.3
KDM3A-206ENST00000452034 PTPRMP28827 1452 aa23.16■■□□□ 1.3
KDM3A-206ENST00000452034 ABCC3O15438 1527 aa23.15■■□□□ 1.3
KDM3A-206ENST00000452034 MROH2AA6NES4 1674 aa23.14■■□□□ 1.29
KDM3A-206ENST00000452034 ZC3H13Q5T200 1668 aaKnown RBP23.14■■□□□ 1.29
KDM3A-206ENST00000452034 TRIM26Q12899 539 aaPredicted RBP23.14■■□□□ 1.29
KDM3A-206ENST00000452034 PLPPR3Q6T4P5 718 aa23.14■■□□□ 1.29
KDM3A-206ENST00000452034 VWDEQ8N2E2 1590 aa23.14■■□□□ 1.29
KDM3A-206ENST00000452034 C3P01024 1663 aa23.13■■□□□ 1.29
KDM3A-206ENST00000452034 ESF1Q9H501 851 aaKnown RBP23.13■■□□□ 1.29
KDM3A-206ENST00000452034 WASHC2CQ9Y4E1 1318 aa23.12■■□□□ 1.29
KDM3A-206ENST00000452034 CNTLNQ9NXG0 1405 aa23.12■■□□□ 1.29
KDM3A-206ENST00000452034 FAM135AQ9P2D6 1515 aa23.12■■□□□ 1.29
KDM3A-206ENST00000452034 SETD5Q9C0A6 1442 aa23.11■■□□□ 1.29
KDM3A-206ENST00000452034 CAMSAP1Q5T5Y3 1602 aa23.11■■□□□ 1.29
KDM3A-206ENST00000452034 CEBPAP49715 358 aaPredicted RBP23.1■■□□□ 1.29
KDM3A-206ENST00000452034 AEBP2Q6ZN18 517 aaPredicted RBP23.1■■□□□ 1.29
KDM3A-206ENST00000452034 PPP6R1Q9UPN7 881 aa23.09■■□□□ 1.29
KDM3A-206ENST00000452034 KANK1Q14678 1352 aa23.09■■□□□ 1.29
KDM3A-206ENST00000452034 IQGAP3Q86VI3 1631 aa23.08■■□□□ 1.29
KDM3A-206ENST00000452034 ZMYM3Q14202 1370 aa23.07■■□□□ 1.28
KDM3A-206ENST00000452034 RAB3GAP2Q9H2M9 1393 aa23.07■■□□□ 1.28
KDM3A-206ENST00000452034 NUP155O75694 1391 aa23.06■■□□□ 1.28
KDM3A-206ENST00000452034 LMTK2Q8IWU2 1503 aa23.06■■□□□ 1.28
KDM3A-206ENST00000452034 TET3O43151 1660 aa23.03■■□□□ 1.28
KDM3A-206ENST00000452034 EFCAB6Q5THR3 1501 aa23.03■■□□□ 1.28
KDM3A-206ENST00000452034 TRIM52Q96A61 297 aa23.02■■□□□ 1.28
KDM3A-206ENST00000452034 PZPP20742 1482 aa23.01■■□□□ 1.27
KDM3A-206ENST00000452034 CFAP65Q6ZU64 1925 aaKnown RBP23■■□□□ 1.27
KDM3A-206ENST00000452034 E9PCH4 1651 aa22.99■■□□□ 1.27
KDM3A-206ENST00000452034 NPATQ14207 1427 aa22.99■■□□□ 1.27
KDM3A-206ENST00000452034 FBXO31Q5XUX0 539 aaPredicted RBP22.98■■□□□ 1.27
KDM3A-206ENST00000452034 PREX1Q8TCU6 1659 aa22.97■■□□□ 1.27
KDM3A-206ENST00000452034 ARHGAP31Q2M1Z3 1444 aa22.96■■□□□ 1.27
KDM3A-206ENST00000452034 ERVK-7P63135 1459 aa22.94■■□□□ 1.26
KDM3A-206ENST00000452034 PCGF6Q9BYE7 350 aa22.93■■□□□ 1.26
KDM3A-206ENST00000452034 SPATA31D1Q6ZQQ2 1576 aa22.93■■□□□ 1.26
KDM3A-206ENST00000452034 MYO3AQ8NEV4 1616 aa22.91■■□□□ 1.26
KDM3A-206ENST00000452034 TNRQ92752 1358 aa22.89■■□□□ 1.26
KDM3A-206ENST00000452034 SLC4A1APQ9BWU0 796 aaKnown RBP22.89■■□□□ 1.25
KDM3A-206ENST00000452034 RPRD2Q5VT52 1461 aaKnown RBP22.89■■□□□ 1.25
KDM3A-206ENST00000452034 SYNMO15061 1565 aa22.89■■□□□ 1.25
KDM3A-206ENST00000452034 HRCP23327 699 aa22.86■■□□□ 1.25
KDM3A-206ENST00000452034 PKD2Q13563 968 aa22.86■■□□□ 1.25
KDM3A-206ENST00000452034 MPHOSPH9Q99550 1183 aa22.86■■□□□ 1.25
KDM3A-206ENST00000452034 SPHKAPQ2M3C7 1700 aa22.85■■□□□ 1.25
KDM3A-206ENST00000452034 NOS1P29475 1434 aa22.85■■□□□ 1.25
KDM3A-206ENST00000452034 FOXD1Q16676 465 aa22.85■■□□□ 1.25
KDM3A-206ENST00000452034 SETD1BQ9UPS6 1966 aaKnown RBP22.84■■□□□ 1.25
KDM3A-206ENST00000452034 UGGT1Q9NYU2 1555 aa22.84■■□□□ 1.25
KDM3A-206ENST00000452034 LMTK3Q96Q04 1460 aa22.83■■□□□ 1.25
KDM3A-206ENST00000452034 UHRF1BP1Q6BDS2 1440 aa22.82■■□□□ 1.24
KDM3A-206ENST00000452034 ZNF142P52746 1687 aaPredicted RBP22.82■■□□□ 1.24
KDM3A-206ENST00000452034 ACIN1Q9UKV3 1341 aaKnown RBP22.82■■□□□ 1.24
KDM3A-206ENST00000452034 CEP170BQ9Y4F5 1589 aaPredicted RBP22.81■■□□□ 1.24
KDM3A-206ENST00000452034 PIK3C2BO00750 1634 aa22.79■■□□□ 1.24
KDM3A-206ENST00000452034 PTPRTO14522 1441 aa22.78■■□□□ 1.24
KDM3A-206ENST00000452034 A2ML1A8K2U0 1454 aa22.78■■□□□ 1.24
KDM3A-206ENST00000452034 PLA2R1Q13018 1463 aa22.78■■□□□ 1.24
KDM3A-206ENST00000452034 NLRP1Q9C000 1473 aa22.78■■□□□ 1.24
KDM3A-206ENST00000452034 TRPM2O94759 1503 aa22.77■■□□□ 1.24
KDM3A-206ENST00000452034 CLTCL1P53675 1640 aa22.76■■□□□ 1.23
KDM3A-206ENST00000452034 HSPA2P54652 639 aa22.74■■□□□ 1.23
KDM3A-206ENST00000452034 UBR1Q8IWV7 1749 aa22.74■■□□□ 1.23
KDM3A-206ENST00000452034 IDI1Q13907 227 aa22.73■■□□□ 1.23
KDM3A-206ENST00000452034 MYO5BQ9ULV0 1848 aa22.71■■□□□ 1.23
KDM3A-206ENST00000452034 ADGRB3O60242 1522 aa22.71■■□□□ 1.23
KDM3A-206ENST00000452034 DHX57Q6P158 1386 aaKnown RBP22.69■■□□□ 1.22
KDM3A-206ENST00000452034 SLC52A1Q9NWF4 448 aa22.68■■□□□ 1.22
KDM3A-206ENST00000452034 TMEM131LA2VDJ0 1609 aa22.68■■□□□ 1.22
KDM3A-206ENST00000452034 KDM5AP29375 1690 aaKnown RBP22.66■■□□□ 1.22
KDM3A-206ENST00000452034 CHGAP10645 457 aaKnown RBP22.65■■□□□ 1.22
KDM3A-206ENST00000452034 ANKRD30BQ9BXX2 1392 aa22.64■■□□□ 1.22
KDM3A-206ENST00000452034 KIF1BO60333 1816 aa22.64■■□□□ 1.22
KDM3A-206ENST00000452034 STAG3Q9UJ98 1225 aa22.64■■□□□ 1.21
KDM3A-206ENST00000452034 CCDC144AA2RUR9 1427 aa22.64■■□□□ 1.21
KDM3A-206ENST00000452034 STRCQ7RTU9 1775 aa22.61■■□□□ 1.21
KDM3A-206ENST00000452034 THEMISQ8N1K5 641 aaPredicted RBP22.6■■□□□ 1.21
KDM3A-206ENST00000452034 POLR1AO95602 1720 aaPredicted RBP22.59■■□□□ 1.21
KDM3A-206ENST00000452034 ARHGAP23Q9P227 1491 aa22.58■■□□□ 1.2
KDM3A-206ENST00000452034 SLIT1O75093 1534 aa22.57■■□□□ 1.2
KDM3A-206ENST00000452034 NCKAP5LQ9HCH0 1330 aa22.57■■□□□ 1.2
KDM3A-206ENST00000452034 TMEM2Q9UHN6 1383 aa22.56■■□□□ 1.2
KDM3A-206ENST00000452034 NEURL4Q96JN8 1562 aa22.55■■□□□ 1.2
KDM3A-206ENST00000452034 SPATA31E1Q6ZUB1 1445 aa22.54■■□□□ 1.2
KDM3A-206ENST00000452034 ZNF326Q5BKZ1 582 aaKnown RBP22.53■■□□□ 1.2
KDM3A-206ENST00000452034 ZFYVE9O95405 1425 aa22.53■■□□□ 1.2
KDM3A-206ENST00000452034 RIMS2Q9UQ26 1411 aa22.53■■□□□ 1.2
KDM3A-206ENST00000452034 NEXMIFQ5QGS0 1516 aa22.52■■□□□ 1.19
KDM3A-206ENST00000452034 LTKP29376 864 aa22.51■■□□□ 1.19
KDM3A-206ENST00000452034 NUTM2DQ5VT03 806 aaPredicted RBP22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms