RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 FER1L4A9Z1Z3 1794 aa36.28■■■■□ 3.4
CPSF4-207ENST00000451876 GGT6Q6P531 493 aa36.25■■■■□ 3.39
CPSF4-207ENST00000451876 TRIM26Q12899 539 aaPredicted RBP36.24■■■■□ 3.39
CPSF4-207ENST00000451876 PRDM15P57071 1507 aaPredicted RBP36.22■■■■□ 3.39
CPSF4-207ENST00000451876 KDM4FA0A1W2PPD8 638 aa36.2■■■■□ 3.39
CPSF4-207ENST00000451876 RIMS1Q86UR5 1692 aaKnown RBP36.2■■■■□ 3.39
CPSF4-207ENST00000451876 UNC13BO14795 1591 aa36.19■■■■□ 3.38
CPSF4-207ENST00000451876 CLTCQ00610 1675 aaKnown RBP36.18■■■■□ 3.38
CPSF4-207ENST00000451876 CEP152O94986 1710 aa36.15■■■■□ 3.38
CPSF4-207ENST00000451876 KDM5DQ9BY66 1539 aa36.13■■■■□ 3.37
CPSF4-207ENST00000451876 ZC3H13Q5T200 1668 aaKnown RBP36.12■■■■□ 3.37
CPSF4-207ENST00000451876 SETD5Q9C0A6 1442 aa36.11■■■■□ 3.37
CPSF4-207ENST00000451876 VWDEQ8N2E2 1590 aa36.1■■■■□ 3.37
CPSF4-207ENST00000451876 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.1■■■■□ 3.375e-6■□□□□ 8.1
CPSF4-207ENST00000451876 FAM135AQ9P2D6 1515 aa36.09■■■■□ 3.37
CPSF4-207ENST00000451876 ABCC3O15438 1527 aa36.09■■■■□ 3.37
CPSF4-207ENST00000451876 MROH2AA6NES4 1674 aa36.08■■■■□ 3.37
CPSF4-207ENST00000451876 PPP6R1Q9UPN7 881 aa36.05■■■■□ 3.36
CPSF4-207ENST00000451876 IQGAP3Q86VI3 1631 aa36.04■■■■□ 3.36
CPSF4-207ENST00000451876 C3P01024 1663 aa36.04■■■■□ 3.36
CPSF4-207ENST00000451876 WASHC2CQ9Y4E1 1318 aa36.04■■■■□ 3.36
CPSF4-207ENST00000451876 RAB3GAP2Q9H2M9 1393 aa36.04■■■■□ 3.36
CPSF4-207ENST00000451876 CNTLNQ9NXG0 1405 aa36.03■■■■□ 3.36
CPSF4-207ENST00000451876 ESF1Q9H501 851 aaKnown RBP36.03■■■■□ 3.36
CPSF4-207ENST00000451876 CAMSAP1Q5T5Y3 1602 aa36.03■■■■□ 3.36
CPSF4-207ENST00000451876 PTPRMP28827 1452 aa36.02■■■■□ 3.36
CPSF4-207ENST00000451876 KANK1Q14678 1352 aa36.01■■■■□ 3.36
CPSF4-207ENST00000451876 LMTK2Q8IWU2 1503 aa35.98■■■■□ 3.35
CPSF4-207ENST00000451876 NUP155O75694 1391 aa35.97■■■■□ 3.35
CPSF4-207ENST00000451876 TET3O43151 1660 aa35.95■■■■□ 3.35
CPSF4-207ENST00000451876 ZMYM3Q14202 1370 aa35.94■■■■□ 3.34
CPSF4-207ENST00000451876 EFCAB6Q5THR3 1501 aa35.92■■■■□ 3.34
CPSF4-207ENST00000451876 CEBPAP49715 358 aaPredicted RBP35.91■■■■□ 3.34
CPSF4-207ENST00000451876 PLPPR3Q6T4P5 718 aa35.9■■■■□ 3.34
CPSF4-207ENST00000451876 TRIM52Q96A61 297 aa35.89■■■■□ 3.34
CPSF4-207ENST00000451876 PZPP20742 1482 aa35.88■■■■□ 3.33
CPSF4-207ENST00000451876 CFAP65Q6ZU64 1925 aaKnown RBP35.87■■■■□ 3.33
CPSF4-207ENST00000451876 PCGF6Q9BYE7 350 aa35.87■■■■□ 3.33
CPSF4-207ENST00000451876 E9PCH4 1651 aa35.87■■■■□ 3.33
CPSF4-207ENST00000451876 NPATQ14207 1427 aa35.85■■■■□ 3.33
CPSF4-207ENST00000451876 ARHGAP31Q2M1Z3 1444 aa35.83■■■■□ 3.33
CPSF4-207ENST00000451876 PREX1Q8TCU6 1659 aa35.82■■■■□ 3.32
CPSF4-207ENST00000451876 HRCP23327 699 aa35.79■■■■□ 3.32
CPSF4-207ENST00000451876 FBXO31Q5XUX0 539 aaPredicted RBP35.77■■■■□ 3.32
CPSF4-207ENST00000451876 SPATA31D1Q6ZQQ2 1576 aa35.75■■■■□ 3.31
CPSF4-207ENST00000451876 ERVK-7P63135 1459 aa35.75■■■■□ 3.31
CPSF4-207ENST00000451876 RPRD2Q5VT52 1461 aaKnown RBP35.75■■■■□ 3.31
CPSF4-207ENST00000451876 ACIN1Q9UKV3 1341 aaKnown RBP35.73■■■■□ 3.31
CPSF4-207ENST00000451876 SLC4A1APQ9BWU0 796 aaKnown RBP35.73■■■■□ 3.31
CPSF4-207ENST00000451876 MPHOSPH9Q99550 1183 aa35.69■■■■□ 3.3
CPSF4-207ENST00000451876 SETD1BQ9UPS6 1966 aaKnown RBP35.68■■■■□ 3.3
CPSF4-207ENST00000451876 SYNMO15061 1565 aa35.68■■■■□ 3.3
CPSF4-207ENST00000451876 MYO3AQ8NEV4 1616 aa35.68■■■■□ 3.3
CPSF4-207ENST00000451876 SPHKAPQ2M3C7 1700 aa35.67■■■■□ 3.3
CPSF4-207ENST00000451876 PKD2Q13563 968 aa35.66■■■■□ 3.3
CPSF4-207ENST00000451876 NOS1P29475 1434 aa35.66■■■■□ 3.3
CPSF4-207ENST00000451876 TNRQ92752 1358 aa35.64■■■■□ 3.3
CPSF4-207ENST00000451876 FOXD1Q16676 465 aa35.61■■■■□ 3.29
CPSF4-207ENST00000451876 UGGT1Q9NYU2 1555 aa35.58■■■■□ 3.29
CPSF4-207ENST00000451876 AEBP2Q6ZN18 517 aaPredicted RBP35.57■■■■□ 3.29
CPSF4-207ENST00000451876 ZNF142P52746 1687 aaPredicted RBP35.57■■■■□ 3.29
CPSF4-207ENST00000451876 PTPRTO14522 1441 aa35.56■■■■□ 3.28
CPSF4-207ENST00000451876 PIK3C2BO00750 1634 aa35.55■■■■□ 3.28
CPSF4-207ENST00000451876 PLA2R1Q13018 1463 aa35.55■■■■□ 3.28
CPSF4-207ENST00000451876 TRPM2O94759 1503 aa35.54■■■■□ 3.28
CPSF4-207ENST00000451876 UHRF1BP1Q6BDS2 1440 aa35.54■■■■□ 3.28
CPSF4-207ENST00000451876 CEP170BQ9Y4F5 1589 aaPredicted RBP35.53■■■■□ 3.28
CPSF4-207ENST00000451876 LMTK3Q96Q04 1460 aa35.52■■■■□ 3.28
CPSF4-207ENST00000451876 NLRP1Q9C000 1473 aa35.51■■■■□ 3.28
CPSF4-207ENST00000451876 CLTCL1P53675 1640 aa35.49■■■■□ 3.27
CPSF4-207ENST00000451876 A2ML1A8K2U0 1454 aa35.46■■■■□ 3.27
CPSF4-207ENST00000451876 UBR1Q8IWV7 1749 aa35.46■■■■□ 3.27
CPSF4-207ENST00000451876 DHX57Q6P158 1386 aaKnown RBP35.45■■■■□ 3.27
CPSF4-207ENST00000451876 IDI1Q13907 227 aa35.43■■■■□ 3.26
CPSF4-207ENST00000451876 MYO5BQ9ULV0 1848 aa35.42■■■■□ 3.26
CPSF4-207ENST00000451876 SLC52A1Q9NWF4 448 aa35.41■■■■□ 3.26
CPSF4-207ENST00000451876 KDM5AP29375 1690 aaKnown RBP35.39■■■■□ 3.26
CPSF4-207ENST00000451876 ADGRB3O60242 1522 aa35.38■■■■□ 3.25
CPSF4-207ENST00000451876 TMEM131LA2VDJ0 1609 aa35.37■■■■□ 3.25
CPSF4-207ENST00000451876 ANKRD30BQ9BXX2 1392 aa35.37■■■■□ 3.25
CPSF4-207ENST00000451876 KIF1BO60333 1816 aa35.36■■■■□ 3.25
CPSF4-207ENST00000451876 CCDC144AA2RUR9 1427 aa35.34■■■■□ 3.25
CPSF4-207ENST00000451876 HSPA2P54652 639 aa35.33■■■■□ 3.25
CPSF4-207ENST00000451876 STAG3Q9UJ98 1225 aa35.26■■■■□ 3.24
CPSF4-207ENST00000451876 CHGAP10645 457 aaKnown RBP35.25■■■■□ 3.23
CPSF4-207ENST00000451876 THEMISQ8N1K5 641 aaPredicted RBP35.22■■■■□ 3.23
CPSF4-207ENST00000451876 SLIT1O75093 1534 aa35.21■■■■□ 3.23
CPSF4-207ENST00000451876 STRCQ7RTU9 1775 aa35.2■■■■□ 3.22
CPSF4-207ENST00000451876 ARHGAP23Q9P227 1491 aa35.19■■■■□ 3.22
CPSF4-207ENST00000451876 POLR1AO95602 1720 aaPredicted RBP35.19■■■■□ 3.22
CPSF4-207ENST00000451876 SPATA31E1Q6ZUB1 1445 aa35.18■■■■□ 3.22
CPSF4-207ENST00000451876 TMEM2Q9UHN6 1383 aa35.17■■■■□ 3.22
CPSF4-207ENST00000451876 NEURL4Q96JN8 1562 aa35.15■■■■□ 3.22
CPSF4-207ENST00000451876 ZFYVE9O95405 1425 aa35.13■■■■□ 3.21
CPSF4-207ENST00000451876 NEXMIFQ5QGS0 1516 aa35.12■■■■□ 3.21
CPSF4-207ENST00000451876 SIN3AQ96ST3 1273 aa35.1■■■■□ 3.21
CPSF4-207ENST00000451876 IFT172Q9UG01 1749 aa35.1■■■■□ 3.21
CPSF4-207ENST00000451876 PPLO60437 1756 aa35.1■■■■□ 3.21
CPSF4-207ENST00000451876 RIMS2Q9UQ26 1411 aa35.09■■■■□ 3.21
CPSF4-207ENST00000451876 ZNF326Q5BKZ1 582 aaKnown RBP35.09■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms