RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 DCAF8L1A6NGE4 600 aa16.33■□□□□ 0.2
LINC01004-202ENST00000450686 NCOA2Q15596 1464 aa16.33■□□□□ 0.2
LINC01004-202ENST00000450686 CEP170BQ9Y4F5 1589 aaPredicted RBP16.33■□□□□ 0.2
LINC01004-202ENST00000450686 CAMSAP2Q08AD1 1489 aa16.32■□□□□ 0.2
LINC01004-202ENST00000450686 ZNF335Q9H4Z2 1342 aaPredicted RBP16.31■□□□□ 0.2
LINC01004-202ENST00000450686 LOC105371045A0A1W2PR82 267 aa16.29■□□□□ 0.2
LINC01004-202ENST00000450686 FBXO31Q5XUX0 539 aaPredicted RBP16.28■□□□□ 0.2
LINC01004-202ENST00000450686 CCDC141Q6ZP82 1450 aa16.28■□□□□ 0.2
LINC01004-202ENST00000450686 DISP3Q9P2K9 1392 aa16.27■□□□□ 0.2
LINC01004-202ENST00000450686 ILDR2Q71H61 639 aa16.27■□□□□ 0.2
LINC01004-202ENST00000450686 DHX29Q7Z478 1369 aaKnown RBP16.26■□□□□ 0.19
LINC01004-202ENST00000450686 KIF3BO15066 747 aa16.26■□□□□ 0.19
LINC01004-202ENST00000450686 TCOF1Q13428 1488 aaKnown RBP16.25■□□□□ 0.19
LINC01004-202ENST00000450686 DNMT1P26358 1616 aaKnown RBP16.25■□□□□ 0.19
LINC01004-202ENST00000450686 RTEL1-TNFRSF6BF6WH68 1400 aa16.25■□□□□ 0.19
LINC01004-202ENST00000450686 PLA2R1Q13018 1463 aa16.23■□□□□ 0.19
LINC01004-202ENST00000450686 A2ML1A8K2U0 1454 aa16.22■□□□□ 0.19
LINC01004-202ENST00000450686 SPATA31D1Q6ZQQ2 1576 aa16.22■□□□□ 0.19
LINC01004-202ENST00000450686 KDM5DQ9BY66 1539 aa16.22■□□□□ 0.19
LINC01004-202ENST00000450686 TNRQ92752 1358 aa16.21■□□□□ 0.19
LINC01004-202ENST00000450686 NEURL4Q96JN8 1562 aa16.21■□□□□ 0.18
LINC01004-202ENST00000450686 POLR1AO95602 1720 aaPredicted RBP16.2■□□□□ 0.18
LINC01004-202ENST00000450686 KANK4Q5T7N3 995 aaPredicted RBP16.2■□□□□ 0.18
LINC01004-202ENST00000450686 LRRC9Q6ZRR7 1453 aa16.2■□□□□ 0.18
LINC01004-202ENST00000450686 ARHGEF5Q12774 1597 aa16.2■□□□□ 0.18
LINC01004-202ENST00000450686 VPS8Q8N3P4 1428 aa16.19■□□□□ 0.18
LINC01004-202ENST00000450686 PZPP20742 1482 aa16.19■□□□□ 0.18
LINC01004-202ENST00000450686 UBAP1LF5GYI3 381 aa16.19■□□□□ 0.18
LINC01004-202ENST00000450686 PKD2Q13563 968 aa16.19■□□□□ 0.18
LINC01004-202ENST00000450686 IQSEC2Q5JU85 1478 aa16.18■□□□□ 0.18
LINC01004-202ENST00000450686 WASHC2CQ9Y4E1 1318 aa16.18■□□□□ 0.18
LINC01004-202ENST00000450686 SLC4A1APQ9BWU0 796 aaKnown RBP16.17■□□□□ 0.18
LINC01004-202ENST00000450686 CFAP65Q6ZU64 1925 aaKnown RBP16.16■□□□□ 0.18
LINC01004-202ENST00000450686 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.15■□□□□ 0.181e-6■■□□□ 13
LINC01004-202ENST00000450686 CEP152O94986 1710 aa16.14■□□□□ 0.17
LINC01004-202ENST00000450686 RNF17Q9BXT8 1623 aaKnown RBP16.14■□□□□ 0.17
LINC01004-202ENST00000450686 ABCC3O15438 1527 aa16.14■□□□□ 0.17
LINC01004-202ENST00000450686 MROH1Q8NDA8 1641 aa16.13■□□□□ 0.17
LINC01004-202ENST00000450686 TSPY4P0CV99 314 aa16.13■□□□□ 0.17
LINC01004-202ENST00000450686 TSPY10P0CW01 314 aa16.13■□□□□ 0.17
LINC01004-202ENST00000450686 MAST1Q9Y2H9 1570 aa16.13■□□□□ 0.17
LINC01004-202ENST00000450686 MIA2Q96PC5 1412 aa16.11■□□□□ 0.17
LINC01004-202ENST00000450686 CACNB1Q02641 598 aaPredicted RBP16.11■□□□□ 0.17
LINC01004-202ENST00000450686 UGGT1Q9NYU2 1555 aa16.11■□□□□ 0.17
LINC01004-202ENST00000450686 MYOM3Q5VTT5 1437 aa16.11■□□□□ 0.17
LINC01004-202ENST00000450686 FAM135AQ9P2D6 1515 aa16.1■□□□□ 0.17
LINC01004-202ENST00000450686 VWDEQ8N2E2 1590 aa16.1■□□□□ 0.17
LINC01004-202ENST00000450686 PIP4K2BP78356 416 aa16.1■□□□□ 0.17
LINC01004-202ENST00000450686 RSPH4AQ5TD94 716 aa16.1■□□□□ 0.17
LINC01004-202ENST00000450686 SHANK2Q9UPX8 1470 aa16.09■□□□□ 0.17
LINC01004-202ENST00000450686 NLRP1Q9C000 1473 aa16.08■□□□□ 0.16
LINC01004-202ENST00000450686 ZC3H13Q5T200 1668 aaKnown RBP16.08■□□□□ 0.16
LINC01004-202ENST00000450686 STRCP1A6NGW2 1772 aa16.08■□□□□ 0.16
LINC01004-202ENST00000450686 NPHP4O75161 1426 aaPredicted RBP16.07■□□□□ 0.16
LINC01004-202ENST00000450686 ERVK-7P63135 1459 aa16.07■□□□□ 0.16
LINC01004-202ENST00000450686 EIF2AK4Q9P2K8 1649 aaKnown RBP16.07■□□□□ 0.16
LINC01004-202ENST00000450686 CROCC2H7BZ55 1655 aa16.06■□□□□ 0.16
LINC01004-202ENST00000450686 IQGAP1P46940 1657 aa16.06■□□□□ 0.16
LINC01004-202ENST00000450686 ANKLE2Q86XL3 938 aa16.06■□□□□ 0.16
LINC01004-202ENST00000450686 SOCS7O14512 581 aa16.05■□□□□ 0.16
LINC01004-202ENST00000450686 HSPA1LP34931 641 aa16.05■□□□□ 0.16
LINC01004-202ENST00000450686 CPS1P31327 1500 aa16.04■□□□□ 0.16
LINC01004-202ENST00000450686 MAP3K1Q13233 1512 aa16.04■□□□□ 0.16
LINC01004-202ENST00000450686 THEMISQ8N1K5 641 aaPredicted RBP16.04■□□□□ 0.16
LINC01004-202ENST00000450686 UBR1Q8IWV7 1749 aa16.04■□□□□ 0.16
LINC01004-202ENST00000450686 DEPDC5O75140 1603 aa16.04■□□□□ 0.16
LINC01004-202ENST00000450686 PTPN23Q9H3S7 1636 aa16.04■□□□□ 0.16
LINC01004-202ENST00000450686 ALKQ9UM73 1620 aa16.04■□□□□ 0.16
LINC01004-202ENST00000450686 RRP7BPQ9NSQ0 103 aa16.03■□□□□ 0.16
LINC01004-202ENST00000450686 DUOX2Q9NRD8 1548 aa16.03■□□□□ 0.16
LINC01004-202ENST00000450686 ABCC5O15440 1437 aa16.02■□□□□ 0.16
LINC01004-202ENST00000450686 KIF15Q9NS87 1388 aa16.02■□□□□ 0.16
LINC01004-202ENST00000450686 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.02■□□□□ 0.16
LINC01004-202ENST00000450686 MED14O60244 1454 aa16.02■□□□□ 0.15
LINC01004-202ENST00000450686 PRDM15P57071 1507 aaPredicted RBP15.99■□□□□ 0.15
LINC01004-202ENST00000450686 CHIC2Q9UKJ5 165 aa15.99■□□□□ 0.15
LINC01004-202ENST00000450686 DAPK1P53355 1430 aa15.98■□□□□ 0.15
LINC01004-202ENST00000450686 MED1Q15648 1581 aaPredicted RBP15.98■□□□□ 0.15
LINC01004-202ENST00000450686 PIK3C2BO00750 1634 aa15.97■□□□□ 0.15
LINC01004-202ENST00000450686 LTKP29376 864 aa15.97■□□□□ 0.15
LINC01004-202ENST00000450686 LRRC7Q96NW7 1537 aa15.97■□□□□ 0.15
LINC01004-202ENST00000450686 FGD6Q6ZV73 1430 aa15.96■□□□□ 0.15
LINC01004-202ENST00000450686 TOM1O60784 492 aa15.96■□□□□ 0.15
LINC01004-202ENST00000450686 SCAF11Q99590 1463 aaKnown RBP15.95■□□□□ 0.14
LINC01004-202ENST00000450686 ERBINQ96RT1 1412 aa15.94■□□□□ 0.14
LINC01004-202ENST00000450686 SLC4A2P04920 1241 aa15.94■□□□□ 0.14
LINC01004-202ENST00000450686 APLP2Q06481 763 aa15.93■□□□□ 0.14
LINC01004-202ENST00000450686 XIRP1Q702N8 1843 aaKnown RBP15.93■□□□□ 0.14
LINC01004-202ENST00000450686 SYNMO15061 1565 aa15.92■□□□□ 0.14
LINC01004-202ENST00000450686 ARHGAP23Q9P227 1491 aa15.92■□□□□ 0.14
LINC01004-202ENST00000450686 TXNDC2Q86VQ3 553 aa15.92■□□□□ 0.14
LINC01004-202ENST00000450686 SLIT1O75093 1534 aa15.91■□□□□ 0.14
LINC01004-202ENST00000450686 ARHGAP31Q2M1Z3 1444 aa15.91■□□□□ 0.14
LINC01004-202ENST00000450686 KANK1Q14678 1352 aa15.87■□□□□ 0.13
LINC01004-202ENST00000450686 FAM50AQ14320 339 aaKnown RBP15.87■□□□□ 0.13
LINC01004-202ENST00000450686 RBM33Q96EV2 1170 aaKnown RBP15.87■□□□□ 0.13
LINC01004-202ENST00000450686 STAG3Q9UJ98 1225 aa15.87■□□□□ 0.13
LINC01004-202ENST00000450686 ANKRD30AQ9BXX3 1397 aa15.87■□□□□ 0.13
LINC01004-202ENST00000450686 EFCAB6Q5THR3 1501 aa15.86■□□□□ 0.13
LINC01004-202ENST00000450686 IDI1Q13907 227 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms