RNA–Protein interactions for RNA: ENST00000449617.5

SEC22C-209, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 2

Gene SEC22C, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-209ENST00000449617 SHANK2Q9UPX8 1470 aa20.42■□□□□ 0.86
SEC22C-209ENST00000449617 RNF17Q9BXT8 1623 aaKnown RBP20.41■□□□□ 0.86
SEC22C-209ENST00000449617 ABCC5O15440 1437 aa20.41■□□□□ 0.86
SEC22C-209ENST00000449617 ZNF142P52746 1687 aaPredicted RBP20.41■□□□□ 0.86
SEC22C-209ENST00000449617 DNMT1P26358 1616 aaKnown RBP20.4■□□□□ 0.86
SEC22C-209ENST00000449617 EIF2AK4Q9P2K8 1649 aaKnown RBP20.4■□□□□ 0.86
SEC22C-209ENST00000449617 DAPK1P53355 1430 aa20.38■□□□□ 0.85
SEC22C-209ENST00000449617 NCOA1Q15788 1441 aa20.38■□□□□ 0.85
SEC22C-209ENST00000449617 CEP170BQ9Y4F5 1589 aaPredicted RBP20.38■□□□□ 0.85
SEC22C-209ENST00000449617 WASHC2CQ9Y4E1 1318 aa20.38■□□□□ 0.85
SEC22C-209ENST00000449617 DUOX2Q9NRD8 1548 aa20.38■□□□□ 0.85
SEC22C-209ENST00000449617 CAMSAP1Q5T5Y3 1602 aa20.37■□□□□ 0.85
SEC22C-209ENST00000449617 DMRT2Q9Y5R5 561 aa20.36■□□□□ 0.85
SEC22C-209ENST00000449617 PZPP20742 1482 aa20.36■□□□□ 0.85
SEC22C-209ENST00000449617 KIF15Q9NS87 1388 aa20.36■□□□□ 0.85
SEC22C-209ENST00000449617 MROH1Q8NDA8 1641 aa20.35■□□□□ 0.85
SEC22C-209ENST00000449617 ABCC3O15438 1527 aa20.34■□□□□ 0.85
SEC22C-209ENST00000449617 ZC3H13Q5T200 1668 aaKnown RBP20.34■□□□□ 0.85
SEC22C-209ENST00000449617 FBXO31Q5XUX0 539 aaPredicted RBP20.33■□□□□ 0.84
SEC22C-209ENST00000449617 FBXO41Q8TF61 875 aa20.33■□□□□ 0.84
SEC22C-209ENST00000449617 TNRQ92752 1358 aa20.33■□□□□ 0.84
SEC22C-209ENST00000449617 PTPRTO14522 1441 aa20.33■□□□□ 0.84
SEC22C-209ENST00000449617 RRP7BPQ9NSQ0 103 aa20.32■□□□□ 0.84
SEC22C-209ENST00000449617 ERBINQ96RT1 1412 aa20.31■□□□□ 0.84
SEC22C-209ENST00000449617 A2ML1A8K2U0 1454 aa20.31■□□□□ 0.84
SEC22C-209ENST00000449617 CEP152O94986 1710 aa20.3■□□□□ 0.84
SEC22C-209ENST00000449617 PLA2R1Q13018 1463 aa20.29■□□□□ 0.84
SEC22C-209ENST00000449617 CHIC2Q9UKJ5 165 aa20.28■□□□□ 0.84
SEC22C-209ENST00000449617 PRDM15P57071 1507 aaPredicted RBP20.28■□□□□ 0.84
SEC22C-209ENST00000449617 ANKRD30AQ9BXX3 1397 aa20.28■□□□□ 0.84
SEC22C-209ENST00000449617 FAM50AQ14320 339 aaKnown RBP20.27■□□□□ 0.84
SEC22C-209ENST00000449617 CERKQ8TCT0 537 aa20.27■□□□□ 0.84
SEC22C-209ENST00000449617 NCKAP5LQ9HCH0 1330 aa20.27■□□□□ 0.84
SEC22C-209ENST00000449617 DEPDC5O75140 1603 aa20.25■□□□□ 0.83
SEC22C-209ENST00000449617 ADGRL2O95490 1459 aa20.24■□□□□ 0.83
SEC22C-209ENST00000449617 SPATA31D1Q6ZQQ2 1576 aa20.24■□□□□ 0.83
SEC22C-209ENST00000449617 ERVK-7P63135 1459 aa20.23■□□□□ 0.83
SEC22C-209ENST00000449617 NLRP1Q9C000 1473 aa20.23■□□□□ 0.83
SEC22C-209ENST00000449617 CFAP65Q6ZU64 1925 aaKnown RBP20.23■□□□□ 0.83
SEC22C-209ENST00000449617 PKD2Q13563 968 aa20.22■□□□□ 0.83
SEC22C-209ENST00000449617 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.2■□□□□ 0.82
SEC22C-209ENST00000449617 POLR1AO95602 1720 aaPredicted RBP20.2■□□□□ 0.82
SEC22C-209ENST00000449617 LTBP4Q8N2S1 1624 aa20.19■□□□□ 0.82
SEC22C-209ENST00000449617 UGGT1Q9NYU2 1555 aa20.19■□□□□ 0.82
SEC22C-209ENST00000449617 PPARGC1BQ86YN6 1023 aaKnown RBP20.18■□□□□ 0.82
SEC22C-209ENST00000449617 KANK1Q14678 1352 aa20.17■□□□□ 0.82
SEC22C-209ENST00000449617 ARHGAP31Q2M1Z3 1444 aa20.17■□□□□ 0.82
SEC22C-209ENST00000449617 VWDEQ8N2E2 1590 aa20.16■□□□□ 0.82
SEC22C-209ENST00000449617 NEURL4Q96JN8 1562 aa20.16■□□□□ 0.82
SEC22C-209ENST00000449617 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.15■□□□□ 0.82
SEC22C-209ENST00000449617 THEMISQ8N1K5 641 aaPredicted RBP20.14■□□□□ 0.81
SEC22C-209ENST00000449617 LMTK2Q8IWU2 1503 aa20.14■□□□□ 0.81
SEC22C-209ENST00000449617 ANKRD50Q9ULJ7 1429 aa20.13■□□□□ 0.81
SEC22C-209ENST00000449617 ZNF335Q9H4Z2 1342 aaPredicted RBP20.13■□□□□ 0.81
SEC22C-209ENST00000449617 UBR1Q8IWV7 1749 aa20.11■□□□□ 0.81
SEC22C-209ENST00000449617 EFCAB6Q5THR3 1501 aa20.1■□□□□ 0.81
SEC22C-209ENST00000449617 ANKLE2Q86XL3 938 aa20.1■□□□□ 0.81
SEC22C-209ENST00000449617 ROCK1Q13464 1354 aa20.08■□□□□ 0.8
SEC22C-209ENST00000449617 IQSEC2Q5JU85 1478 aa20.08■□□□□ 0.8
SEC22C-209ENST00000449617 MED14O60244 1454 aa20.06■□□□□ 0.8
SEC22C-209ENST00000449617 NPHP4O75161 1426 aaPredicted RBP20.06■□□□□ 0.8
SEC22C-209ENST00000449617 PIK3C2BO00750 1634 aa20.06■□□□□ 0.8
SEC22C-209ENST00000449617 UNC13BO14795 1591 aa20.06■□□□□ 0.8
SEC22C-209ENST00000449617 ITGAEP38570 1179 aa20.05■□□□□ 0.8
SEC22C-209ENST00000449617 IQGAP1P46940 1657 aa20.05■□□□□ 0.8
SEC22C-209ENST00000449617 SYNMO15061 1565 aa20.05■□□□□ 0.8
SEC22C-209ENST00000449617 TET3O43151 1660 aa20.03■□□□□ 0.8
SEC22C-209ENST00000449617 NOS1P29475 1434 aa20.02■□□□□ 0.8
SEC22C-209ENST00000449617 SLIT1O75093 1534 aa20.01■□□□□ 0.79
SEC22C-209ENST00000449617 ARHGAP23Q9P227 1491 aa20.01■□□□□ 0.79
SEC22C-209ENST00000449617 GCC2Q8IWJ2 1684 aa20■□□□□ 0.79
SEC22C-209ENST00000449617 RPRD2Q5VT52 1461 aaKnown RBP20■□□□□ 0.79
SEC22C-209ENST00000449617 SCAF11Q99590 1463 aaKnown RBP20■□□□□ 0.79
SEC22C-209ENST00000449617 RRBP1Q9P2E9 1410 aaKnown RBP20■□□□□ 0.79
SEC22C-209ENST00000449617 KDM5AP29375 1690 aaKnown RBP20■□□□□ 0.79
SEC22C-209ENST00000449617 CPS1P31327 1500 aa19.98■□□□□ 0.79
SEC22C-209ENST00000449617 IDI1Q13907 227 aa19.98■□□□□ 0.79
SEC22C-209ENST00000449617 IQGAP3Q86VI3 1631 aa19.97■□□□□ 0.79
SEC22C-209ENST00000449617 STAG3Q9UJ98 1225 aa19.97■□□□□ 0.79
SEC22C-209ENST00000449617 LTKP29376 864 aa19.96■□□□□ 0.79
SEC22C-209ENST00000449617 ADGRB3O60242 1522 aa19.96■□□□□ 0.79
SEC22C-209ENST00000449617 TMEM2Q9UHN6 1383 aa19.95■□□□□ 0.78
SEC22C-209ENST00000449617 TXNDC2Q86VQ3 553 aa19.95■□□□□ 0.78
SEC22C-209ENST00000449617 E9PCH4 1651 aa19.94■□□□□ 0.78
SEC22C-209ENST00000449617 STRCP1A6NGW2 1772 aa19.93■□□□□ 0.78
SEC22C-209ENST00000449617 UBAP1LF5GYI3 381 aa19.93■□□□□ 0.78
SEC22C-209ENST00000449617 SLC52A1Q9NWF4 448 aa19.93■□□□□ 0.78
SEC22C-209ENST00000449617 EID1Q9Y6B2 187 aa19.93■□□□□ 0.78
SEC22C-209ENST00000449617 NUP155O75694 1391 aa19.91■□□□□ 0.78
SEC22C-209ENST00000449617 MYO5BQ9ULV0 1848 aa19.9■□□□□ 0.78
SEC22C-209ENST00000449617 TMEM131LA2VDJ0 1609 aa19.87■□□□□ 0.77
SEC22C-209ENST00000449617 NAIPQ13075 1403 aa19.85■□□□□ 0.77
SEC22C-209ENST00000449617 LRRC7Q96NW7 1537 aa19.85■□□□□ 0.77
SEC22C-209ENST00000449617 ZFYVE9O95405 1425 aa19.83■□□□□ 0.76
SEC22C-209ENST00000449617 SPHKAPQ2M3C7 1700 aa19.81■□□□□ 0.76
SEC22C-209ENST00000449617 RIMS2Q9UQ26 1411 aa19.81■□□□□ 0.76
SEC22C-209ENST00000449617 HFM1A2PYH4 1435 aa19.8■□□□□ 0.76
SEC22C-209ENST00000449617 TOM1O60784 492 aa19.79■□□□□ 0.76
SEC22C-209ENST00000449617 CHGAP10645 457 aaKnown RBP19.79■□□□□ 0.76
SEC22C-209ENST00000449617 SLC26A8Q96RN1 970 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms