RNA–Protein interactions for RNA: ENST00000449415.5

RFTN1-205, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 3

Gene RFTN1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-205ENST00000449415 PPP6R1Q9UPN7 881 aa27.68■■■□□ 2.02
RFTN1-205ENST00000449415 KIF15Q9NS87 1388 aa27.68■■■□□ 2.02
RFTN1-205ENST00000449415 EIF2AK4Q9P2K8 1649 aaKnown RBP27.67■■■□□ 2.02
RFTN1-205ENST00000449415 UHRF1BP1Q6BDS2 1440 aa27.65■■■□□ 2.02
RFTN1-205ENST00000449415 RNF17Q9BXT8 1623 aaKnown RBP27.64■■■□□ 2.02
RFTN1-205ENST00000449415 WASHC2CQ9Y4E1 1318 aa27.64■■■□□ 2.01
RFTN1-205ENST00000449415 KDM5DQ9BY66 1539 aa27.63■■■□□ 2.01
RFTN1-205ENST00000449415 ANKRD30AQ9BXX3 1397 aa27.62■■■□□ 2.01
RFTN1-205ENST00000449415 NPATQ14207 1427 aa27.59■■■□□ 2.01
RFTN1-205ENST00000449415 PTPRKQ15262 1439 aa27.58■■■□□ 2.01
RFTN1-205ENST00000449415 MROH1Q8NDA8 1641 aa27.58■■■□□ 2.01
RFTN1-205ENST00000449415 NCOA1Q15788 1441 aa27.58■■■□□ 2
RFTN1-205ENST00000449415 ERBINQ96RT1 1412 aa27.58■■■□□ 2
RFTN1-205ENST00000449415 FAM135AQ9P2D6 1515 aa27.57■■■□□ 2
RFTN1-205ENST00000449415 CEP152O94986 1710 aa27.56■■■□□ 2
RFTN1-205ENST00000449415 ITGAEP38570 1179 aa27.55■■■□□ 2
RFTN1-205ENST00000449415 ADGRL2O95490 1459 aa27.55■■■□□ 2
RFTN1-205ENST00000449415 ZC3H13Q5T200 1668 aaKnown RBP27.53■■■□□ 2
RFTN1-205ENST00000449415 ABCC3O15438 1527 aa27.53■■■□□ 2
RFTN1-205ENST00000449415 FBXO31Q5XUX0 539 aaPredicted RBP27.53■■■□□ 2
RFTN1-205ENST00000449415 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.53■■■□□ 2
RFTN1-205ENST00000449415 MYO3AQ8NEV4 1616 aa27.52■■■□□ 2
RFTN1-205ENST00000449415 PZPP20742 1482 aa27.51■■□□□ 1.99
RFTN1-205ENST00000449415 CFAP65Q6ZU64 1925 aaKnown RBP27.49■■□□□ 1.99
RFTN1-205ENST00000449415 PRDM15P57071 1507 aaPredicted RBP27.48■■□□□ 1.99
RFTN1-205ENST00000449415 DEPDC5O75140 1603 aa27.48■■□□□ 1.99
RFTN1-205ENST00000449415 CAMSAP1Q5T5Y3 1602 aa27.48■■□□□ 1.99
RFTN1-205ENST00000449415 STRCQ7RTU9 1775 aa27.47■■□□□ 1.99
RFTN1-205ENST00000449415 ZNF142P52746 1687 aaPredicted RBP27.45■■□□□ 1.98
RFTN1-205ENST00000449415 TNRQ92752 1358 aa27.45■■□□□ 1.98
RFTN1-205ENST00000449415 CEP170BQ9Y4F5 1589 aaPredicted RBP27.44■■□□□ 1.98
RFTN1-205ENST00000449415 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.44■■□□□ 1.98
RFTN1-205ENST00000449415 RRBP1Q9P2E9 1410 aaKnown RBP27.42■■□□□ 1.98
RFTN1-205ENST00000449415 ANKRD50Q9ULJ7 1429 aa27.42■■□□□ 1.98
RFTN1-205ENST00000449415 KANK1Q14678 1352 aa27.42■■□□□ 1.98
RFTN1-205ENST00000449415 ROCK1Q13464 1354 aa27.39■■□□□ 1.98
RFTN1-205ENST00000449415 A2ML1A8K2U0 1454 aa27.38■■□□□ 1.97
RFTN1-205ENST00000449415 SPATA31D1Q6ZQQ2 1576 aa27.35■■□□□ 1.97
RFTN1-205ENST00000449415 ERVK-7P63135 1459 aa27.35■■□□□ 1.97
RFTN1-205ENST00000449415 VWDEQ8N2E2 1590 aa27.35■■□□□ 1.97
RFTN1-205ENST00000449415 DMRT2Q9Y5R5 561 aa27.31■■□□□ 1.96
RFTN1-205ENST00000449415 NCKAP5LQ9HCH0 1330 aa27.31■■□□□ 1.96
RFTN1-205ENST00000449415 ARHGAP31Q2M1Z3 1444 aa27.3■■□□□ 1.96
RFTN1-205ENST00000449415 NLRP1Q9C000 1473 aa27.3■■□□□ 1.96
RFTN1-205ENST00000449415 LMTK2Q8IWU2 1503 aa27.3■■□□□ 1.96
RFTN1-205ENST00000449415 UNC13BO14795 1591 aa27.28■■□□□ 1.96
RFTN1-205ENST00000449415 UGGT1Q9NYU2 1555 aa27.26■■□□□ 1.96
RFTN1-205ENST00000449415 PLA2R1Q13018 1463 aa27.26■■□□□ 1.95
RFTN1-205ENST00000449415 EFCAB6Q5THR3 1501 aa27.26■■□□□ 1.95
RFTN1-205ENST00000449415 PTPRTO14522 1441 aa27.24■■□□□ 1.95
RFTN1-205ENST00000449415 TET3O43151 1660 aa27.22■■□□□ 1.95
RFTN1-205ENST00000449415 PKD2Q13563 968 aa27.21■■□□□ 1.95
RFTN1-205ENST00000449415 THEMISQ8N1K5 641 aaPredicted RBP27.21■■□□□ 1.95
RFTN1-205ENST00000449415 POLR1AO95602 1720 aaPredicted RBP27.21■■□□□ 1.95
RFTN1-205ENST00000449415 GCC2Q8IWJ2 1684 aa27.2■■□□□ 1.94
RFTN1-205ENST00000449415 UBR1Q8IWV7 1749 aa27.19■■□□□ 1.94
RFTN1-205ENST00000449415 IQGAP3Q86VI3 1631 aa27.18■■□□□ 1.94
RFTN1-205ENST00000449415 NUP155O75694 1391 aa27.17■■□□□ 1.94
RFTN1-205ENST00000449415 SYNMO15061 1565 aa27.17■■□□□ 1.94
RFTN1-205ENST00000449415 PIK3C2BO00750 1634 aa27.16■■□□□ 1.94
RFTN1-205ENST00000449415 NAIPQ13075 1403 aa27.16■■□□□ 1.94
RFTN1-205ENST00000449415 E9PCH4 1651 aa27.14■■□□□ 1.93
RFTN1-205ENST00000449415 ILDR1Q86SU0 546 aaPredicted RBP27.13■■□□□ 1.93
RFTN1-205ENST00000449415 ANKLE2Q86XL3 938 aa27.13■■□□□ 1.93
RFTN1-205ENST00000449415 NOS1P29475 1434 aa27.13■■□□□ 1.93
RFTN1-205ENST00000449415 NEURL4Q96JN8 1562 aa27.13■■□□□ 1.93
RFTN1-205ENST00000449415 RPRD2Q5VT52 1461 aaKnown RBP27.13■■□□□ 1.93
RFTN1-205ENST00000449415 IDI1Q13907 227 aa27.11■■□□□ 1.93
RFTN1-205ENST00000449415 STAG3Q9UJ98 1225 aa27.11■■□□□ 1.93
RFTN1-205ENST00000449415 CERKQ8TCT0 537 aa27.09■■□□□ 1.93
RFTN1-205ENST00000449415 HFM1A2PYH4 1435 aa27.08■■□□□ 1.93
RFTN1-205ENST00000449415 ZNF335Q9H4Z2 1342 aaPredicted RBP27.05■■□□□ 1.92
RFTN1-205ENST00000449415 NPHP4O75161 1426 aaPredicted RBP27.04■■□□□ 1.92
RFTN1-205ENST00000449415 LTBP4Q8N2S1 1624 aa27.04■■□□□ 1.92
RFTN1-205ENST00000449415 MYO5BQ9ULV0 1848 aa27.03■■□□□ 1.92
RFTN1-205ENST00000449415 KDM5AP29375 1690 aaKnown RBP27.02■■□□□ 1.92
RFTN1-205ENST00000449415 IQGAP1P46940 1657 aa27.02■■□□□ 1.92
RFTN1-205ENST00000449415 TRIM52Q96A61 297 aa27.02■■□□□ 1.92
RFTN1-205ENST00000449415 SLC52A1Q9NWF4 448 aa27.02■■□□□ 1.92
RFTN1-205ENST00000449415 ADGRB3O60242 1522 aa27.01■■□□□ 1.91
RFTN1-205ENST00000449415 FBXO41Q8TF61 875 aa27.01■■□□□ 1.91
RFTN1-205ENST00000449415 SLIT1O75093 1534 aa27■■□□□ 1.91
RFTN1-205ENST00000449415 MED14O60244 1454 aa27■■□□□ 1.91
RFTN1-205ENST00000449415 ARHGAP23Q9P227 1491 aa27■■□□□ 1.91
RFTN1-205ENST00000449415 TXNDC2Q86VQ3 553 aa27■■□□□ 1.91
RFTN1-205ENST00000449415 SCAF11Q99590 1463 aaKnown RBP27■■□□□ 1.91
RFTN1-205ENST00000449415 LTKP29376 864 aa26.99■■□□□ 1.91
RFTN1-205ENST00000449415 TMEM2Q9UHN6 1383 aa26.97■■□□□ 1.91
RFTN1-205ENST00000449415 CHGAP10645 457 aaKnown RBP26.97■■□□□ 1.91
RFTN1-205ENST00000449415 EID1Q9Y6B2 187 aa26.97■■□□□ 1.91
RFTN1-205ENST00000449415 SPHKAPQ2M3C7 1700 aa26.96■■□□□ 1.91
RFTN1-205ENST00000449415 TMEM131LA2VDJ0 1609 aa26.94■■□□□ 1.9
RFTN1-205ENST00000449415 SLC4A1APQ9BWU0 796 aaKnown RBP26.88■■□□□ 1.89
RFTN1-205ENST00000449415 SENP3Q9H4L4 574 aaPredicted RBP26.88■■□□□ 1.89
RFTN1-205ENST00000449415 STRCP1A6NGW2 1772 aa26.85■■□□□ 1.89
RFTN1-205ENST00000449415 RIMS2Q9UQ26 1411 aa26.84■■□□□ 1.89
RFTN1-205ENST00000449415 SETD5Q9C0A6 1442 aa26.83■■□□□ 1.89
RFTN1-205ENST00000449415 BCANQ96GW7 911 aa26.83■■□□□ 1.89
RFTN1-205ENST00000449415 CLTCL1P53675 1640 aa26.83■■□□□ 1.88
RFTN1-205ENST00000449415 ZFYVE9O95405 1425 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms