RNA–Protein interactions for RNA: ENST00000449294.6

CHL1-207, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 4

Gene CHL1, Length 594 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-207ENST00000449294 TTC37Q6PGP7 1564 aa14.64□□□□□ -0.07
CHL1-207ENST00000449294 ATN1P54259 1190 aaPredicted RBP14.63□□□□□ -0.07
CHL1-207ENST00000449294 FBXO41Q8TF61 875 aa14.63□□□□□ -0.07
CHL1-207ENST00000449294 KIF12Q96FN5 646 aa14.62□□□□□ -0.07
CHL1-207ENST00000449294 NEO1Q92859 1461 aa14.62□□□□□ -0.07
CHL1-207ENST00000449294 RIMS1Q86UR5 1692 aaKnown RBP14.61□□□□□ -0.07
CHL1-207ENST00000449294 SIGLEC1Q9BZZ2 1709 aa14.61□□□□□ -0.07
CHL1-207ENST00000449294 MAMSTRQ6ZN01 415 aa14.61□□□□□ -0.07
CHL1-207ENST00000449294 LRRC9Q6ZRR7 1453 aa14.61□□□□□ -0.07
CHL1-207ENST00000449294 PLCH2O75038 1416 aa14.58□□□□□ -0.07
CHL1-207ENST00000449294 RICTORQ6R327 1708 aa14.58□□□□□ -0.08
CHL1-207ENST00000449294 ARID4BQ4LE39 1312 aaPredicted RBP14.57□□□□□ -0.08
CHL1-207ENST00000449294 PHLDB1Q86UU1 1377 aa14.57□□□□□ -0.08
CHL1-207ENST00000449294 CCNB3Q8WWL7 1395 aa14.57□□□□□ -0.08
CHL1-207ENST00000449294 FANCAO15360 1455 aa14.57□□□□□ -0.08
CHL1-207ENST00000449294 SUPT6HQ7KZ85 1726 aaKnown RBP14.56□□□□□ -0.08
CHL1-207ENST00000449294 MYO5CQ9NQX4 1742 aa14.56□□□□□ -0.08
CHL1-207ENST00000449294 KANK4Q5T7N3 995 aaPredicted RBP14.56□□□□□ -0.08
CHL1-207ENST00000449294 BMP2KQ9NSY1 1161 aaPredicted RBP14.56□□□□□ -0.08
CHL1-207ENST00000449294 NCOA2Q15596 1464 aa14.56□□□□□ -0.08
CHL1-207ENST00000449294 ARHGAP5Q13017 1502 aa14.56□□□□□ -0.08
CHL1-207ENST00000449294 CFAP74Q9C0B2 1584 aa14.56□□□□□ -0.08
CHL1-207ENST00000449294 HSPA2P54652 639 aa14.55□□□□□ -0.08
CHL1-207ENST00000449294 EFCAB2Q5VUJ9 269 aa14.55□□□□□ -0.08
CHL1-207ENST00000449294 YEATS2Q9ULM3 1422 aa14.55□□□□□ -0.08
CHL1-207ENST00000449294 TRPC6Q9Y210 931 aa14.54□□□□□ -0.08
CHL1-207ENST00000449294 PREX2Q70Z35 1606 aa14.53□□□□□ -0.08
CHL1-207ENST00000449294 DENND4BO75064 1496 aaPredicted RBP14.53□□□□□ -0.08
CHL1-207ENST00000449294 GPATCH8Q9UKJ3 1502 aaKnown RBP14.52□□□□□ -0.08
CHL1-207ENST00000449294 AKNAQ7Z591 1439 aa14.52□□□□□ -0.08
CHL1-207ENST00000449294 POTEFA5A3E0 1075 aa14.52□□□□□ -0.09
CHL1-207ENST00000449294 LCE2DQ5TA82 110 aaPredicted RBP14.52□□□□□ -0.09
CHL1-207ENST00000449294 SCUBE2Q9NQ36 999 aa14.52□□□□□ -0.09
CHL1-207ENST00000449294 ZMYM4Q5VZL5 1548 aa14.51□□□□□ -0.09
CHL1-207ENST00000449294 MAP3K13O43283 966 aa14.51□□□□□ -0.09
CHL1-207ENST00000449294 VASPP50552 380 aaPredicted RBP14.51□□□□□ -0.09
CHL1-207ENST00000449294 CFDP1Q9UEE9 299 aaPredicted RBP14.51□□□□□ -0.09
CHL1-207ENST00000449294 ZFYVE16Q7Z3T8 1539 aa14.51□□□□□ -0.09
CHL1-207ENST00000449294 RASEFQ8IZ41 740 aa14.5□□□□□ -0.09
CHL1-207ENST00000449294 PCDH10Q9P2E7 1040 aa14.5□□□□□ -0.09
CHL1-207ENST00000449294 CDC42BPAQ5VT25 1732 aa14.49□□□□□ -0.09
CHL1-207ENST00000449294 ITSN2Q9NZM3 1697 aa14.49□□□□□ -0.09
CHL1-207ENST00000449294 PLEKHG5O94827 1062 aa14.48□□□□□ -0.09
CHL1-207ENST00000449294 TIE1P35590 1138 aa14.48□□□□□ -0.09
CHL1-207ENST00000449294 ZNF777Q9ULD5 760 aaPredicted RBP14.48□□□□□ -0.09
CHL1-207ENST00000449294 CDC42BPBQ9Y5S2 1711 aa14.47□□□□□ -0.09
CHL1-207ENST00000449294 MIER1Q8N108 512 aa14.47□□□□□ -0.09
CHL1-207ENST00000449294 SCAPERQ9BY12 1400 aa14.47□□□□□ -0.09
CHL1-207ENST00000449294 MLECQ14165 292 aa14.46□□□□□ -0.09
CHL1-207ENST00000449294 PLEKHH2Q8IVE3 1493 aa14.45□□□□□ -0.1
CHL1-207ENST00000449294 FER1L4A9Z1Z3 1794 aa14.45□□□□□ -0.1
CHL1-207ENST00000449294 MYOM3Q5VTT5 1437 aa14.45□□□□□ -0.1
CHL1-207ENST00000449294 ABCC1P33527 1531 aa14.45□□□□□ -0.1
CHL1-207ENST00000449294 POGZQ7Z3K3 1410 aa14.44□□□□□ -0.1
CHL1-207ENST00000449294 SAMD9LQ8IVG5 1584 aa14.43□□□□□ -0.1
CHL1-207ENST00000449294 MIA2Q96PC5 1412 aa14.42□□□□□ -0.1
CHL1-207ENST00000449294 FAM163AQ96GL9 167 aaPredicted RBP14.42□□□□□ -0.1
CHL1-207ENST00000449294 KIAA1107Q9UPP5 1409 aa14.41□□□□□ -0.1
CHL1-207ENST00000449294 ARHGEF12Q9NZN5 1544 aa14.41□□□□□ -0.1
CHL1-207ENST00000449294 PPARGC1BQ86YN6 1023 aaKnown RBP14.41□□□□□ -0.1
CHL1-207ENST00000449294 ZNF518AQ6AHZ1 1483 aa14.41□□□□□ -0.1
CHL1-207ENST00000449294 SYCP2Q9BX26 1530 aa14.41□□□□□ -0.1
CHL1-207ENST00000449294 CAMSAP2Q08AD1 1489 aa14.4□□□□□ -0.1
CHL1-207ENST00000449294 TTLL13PA6NNM8 815 aa14.4□□□□□ -0.1
CHL1-207ENST00000449294 ZNF644Q9H582 1327 aaPredicted RBP14.4□□□□□ -0.1
CHL1-207ENST00000449294 FGD6Q6ZV73 1430 aa14.39□□□□□ -0.11
CHL1-207ENST00000449294 HNRNPMP52272 730 aaKnown RBP eCLIP14.38□□□□□ -0.11
CHL1-207ENST00000449294 CERKQ8TCT0 537 aa14.38□□□□□ -0.11
CHL1-207ENST00000449294 COLQQ9Y215 455 aaPredicted RBP14.38□□□□□ -0.11
CHL1-207ENST00000449294 TRAPPC8Q9Y2L5 1435 aa14.38□□□□□ -0.11
CHL1-207ENST00000449294 MAGI2Q86UL8 1455 aa14.38□□□□□ -0.11
CHL1-207ENST00000449294 AFAP1Q8N556 730 aa14.37□□□□□ -0.11
CHL1-207ENST00000449294 MYT1LQ9UL68 1186 aa14.37□□□□□ -0.11
CHL1-207ENST00000449294 C9orf84Q5VXU9 1444 aa14.37□□□□□ -0.11
CHL1-207ENST00000449294 KDM5CP41229 1560 aa14.36□□□□□ -0.11
CHL1-207ENST00000449294 CEBPAP49715 358 aaPredicted RBP14.36□□□□□ -0.11
CHL1-207ENST00000449294 PREX1Q8TCU6 1659 aa14.36□□□□□ -0.11
CHL1-207ENST00000449294 RSPH4AQ5TD94 716 aa14.35□□□□□ -0.11
CHL1-207ENST00000449294 PTPN23Q9H3S7 1636 aa14.34□□□□□ -0.11
CHL1-207ENST00000449294 ATP10AO60312 1499 aa14.34□□□□□ -0.11
CHL1-207ENST00000449294 CCDC141Q6ZP82 1450 aa14.34□□□□□ -0.11
CHL1-207ENST00000449294 MBD5Q9P267 1494 aa14.34□□□□□ -0.11
CHL1-207ENST00000449294 TCOF1Q13428 1488 aaKnown RBP14.33□□□□□ -0.12
CHL1-207ENST00000449294 SEC24BO95487 1268 aa14.33□□□□□ -0.12
CHL1-207ENST00000449294 DIP2CQ9Y2E4 1556 aa14.33□□□□□ -0.12
CHL1-207ENST00000449294 SPAG9O60271 1321 aaKnown RBP14.33□□□□□ -0.12
CHL1-207ENST00000449294 MLH3Q9UHC1 1453 aa14.32□□□□□ -0.12
CHL1-207ENST00000449294 STRCQ7RTU9 1775 aa14.32□□□□□ -0.12
CHL1-207ENST00000449294 ARHGEF5Q12774 1597 aa14.32□□□□□ -0.12
CHL1-207ENST00000449294 FAM50AQ14320 339 aaKnown RBP14.32□□□□□ -0.12
CHL1-207ENST00000449294 SGIP1Q9BQI5 828 aa14.32□□□□□ -0.12
CHL1-207ENST00000449294 ABCA6Q8N139 1617 aa14.31□□□□□ -0.12
CHL1-207ENST00000449294 ILDR2Q71H61 639 aa14.31□□□□□ -0.12
CHL1-207ENST00000449294 PLCD3Q8N3E9 789 aa14.31□□□□□ -0.12
CHL1-207ENST00000449294 TRIM35Q9UPQ4 493 aa14.31□□□□□ -0.12
CHL1-207ENST00000449294 TSPY4P0CV99 314 aa14.3□□□□□ -0.12
CHL1-207ENST00000449294 TSPY10P0CW01 314 aa14.3□□□□□ -0.12
CHL1-207ENST00000449294 IER5LQ5T953 404 aa14.3□□□□□ -0.12
CHL1-207ENST00000449294 PCDHB13Q9Y5F0 798 aa14.3□□□□□ -0.12
CHL1-207ENST00000449294 IFNLR1Q8IU57 520 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms