RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 NUP155O75694 1391 aa15.11■□□□□ 0.01
VIPAS39-203ENST00000448935 ERBINQ96RT1 1412 aa15.11■□□□□ 0.01
VIPAS39-203ENST00000448935 UNC13BO14795 1591 aa15.1■□□□□ 0.01
VIPAS39-203ENST00000448935 TRHP20396 242 aaPredicted RBP15.1■□□□□ 0.01
VIPAS39-203ENST00000448935 U3KPZ7 1027 aaPredicted RBP15.08■□□□□ 0
VIPAS39-203ENST00000448935 TRAPPC8Q9Y2L5 1435 aa15.08■□□□□ 0
VIPAS39-203ENST00000448935 SPAG9O60271 1321 aaKnown RBP15.08■□□□□ 0
VIPAS39-203ENST00000448935 ADGRL1O94910 1474 aa15.08■□□□□ 0
VIPAS39-203ENST00000448935 RIMBP3CA6NJZ7 1639 aa15.07■□□□□ 0
VIPAS39-203ENST00000448935 RIMBP3BA6NNM3 1639 aa15.07■□□□□ 0
VIPAS39-203ENST00000448935 RIMBP3Q9UFD9 1639 aa15.07■□□□□ 0
VIPAS39-203ENST00000448935 PKD2Q13563 968 aa15.06■□□□□ 0
VIPAS39-203ENST00000448935 ZFYVE16Q7Z3T8 1539 aa15.06■□□□□ 0
VIPAS39-203ENST00000448935 FAM135AQ9P2D6 1515 aa15.06■□□□□ 0
VIPAS39-203ENST00000448935 INO80Q9ULG1 1556 aaPredicted RBP15.05■□□□□ 0
VIPAS39-203ENST00000448935 CD109Q6YHK3 1445 aa15.05■□□□□ 0
VIPAS39-203ENST00000448935 IQGAP3Q86VI3 1631 aa15.05■□□□□ -0
VIPAS39-203ENST00000448935 SCAPERQ9BY12 1400 aa15.04■□□□□ -0
VIPAS39-203ENST00000448935 MAGI2Q86UL8 1455 aa15.04■□□□□ -0
VIPAS39-203ENST00000448935 ATP7AQ04656 1500 aa15.04■□□□□ -0
VIPAS39-203ENST00000448935 ZNF518AQ6AHZ1 1483 aa15.02□□□□□ -0.01
VIPAS39-203ENST00000448935 TEX14Q8IWB6 1497 aa15.02□□□□□ -0.01
VIPAS39-203ENST00000448935 EIF2AK4Q9P2K8 1649 aaKnown RBP15□□□□□ -0.01
VIPAS39-203ENST00000448935 NEO1Q92859 1461 aa15□□□□□ -0.01
VIPAS39-203ENST00000448935 AFAP1Q8N556 730 aa15□□□□□ -0.01
VIPAS39-203ENST00000448935 L3MBTL2Q969R5 705 aa15□□□□□ -0.01
VIPAS39-203ENST00000448935 FBXO3Q9UK99 471 aa15□□□□□ -0.01
VIPAS39-203ENST00000448935 GLI2P10070 1586 aa14.99□□□□□ -0.01
VIPAS39-203ENST00000448935 DEPDC5O75140 1603 aa14.97□□□□□ -0.01
VIPAS39-203ENST00000448935 MAP3K4Q9Y6R4 1608 aa14.97□□□□□ -0.01
VIPAS39-203ENST00000448935 KDM5CP41229 1560 aa14.96□□□□□ -0.01
VIPAS39-203ENST00000448935 ZNF219Q9P2Y4 722 aaPredicted RBP14.95□□□□□ -0.02
VIPAS39-203ENST00000448935 MYT1LQ9UL68 1186 aa14.95□□□□□ -0.02
VIPAS39-203ENST00000448935 POGZQ7Z3K3 1410 aa14.95□□□□□ -0.02
VIPAS39-203ENST00000448935 KIDINS220Q9ULH0 1771 aa14.95□□□□□ -0.02
VIPAS39-203ENST00000448935 DHX29Q7Z478 1369 aaKnown RBP14.94□□□□□ -0.02
VIPAS39-203ENST00000448935 KANK1Q14678 1352 aa14.94□□□□□ -0.02
VIPAS39-203ENST00000448935 ATP10AO60312 1499 aa14.93□□□□□ -0.02
VIPAS39-203ENST00000448935 MLH3Q9UHC1 1453 aa14.93□□□□□ -0.02
VIPAS39-203ENST00000448935 HECW2Q9P2P5 1572 aa14.93□□□□□ -0.02
VIPAS39-203ENST00000448935 CCDC144AA2RUR9 1427 aa14.93□□□□□ -0.02
VIPAS39-203ENST00000448935 EIF4G2P78344 907 aaKnown RBP eCLIP14.91□□□□□ -0.02
VIPAS39-203ENST00000448935 TET3O43151 1660 aa14.91□□□□□ -0.02
VIPAS39-203ENST00000448935 MIER1Q8N108 512 aa14.9□□□□□ -0.02
VIPAS39-203ENST00000448935 PRDM15P57071 1507 aaPredicted RBP14.9□□□□□ -0.02
VIPAS39-203ENST00000448935 UHRF1BP1Q6BDS2 1440 aa14.9□□□□□ -0.02
VIPAS39-203ENST00000448935 VWDEQ8N2E2 1590 aa14.89□□□□□ -0.03
VIPAS39-203ENST00000448935 DIP2BQ9P265 1576 aa14.89□□□□□ -0.03
VIPAS39-203ENST00000448935 PLCB2Q00722 1185 aa14.89□□□□□ -0.03
VIPAS39-203ENST00000448935 A2MP01023 1474 aa14.89□□□□□ -0.03
VIPAS39-203ENST00000448935 BCORL1Q5H9F3 1711 aa14.88□□□□□ -0.03
VIPAS39-203ENST00000448935 E9PCH4 1651 aa14.87□□□□□ -0.03
VIPAS39-203ENST00000448935 SPDYE4A6NLX3 237 aa14.87□□□□□ -0.03
VIPAS39-203ENST00000448935 KIF3BO15066 747 aa14.87□□□□□ -0.03
VIPAS39-203ENST00000448935 NBPF8Q3BBV2 869 aa14.87□□□□□ -0.03
VIPAS39-203ENST00000448935 RNF17Q9BXT8 1623 aaKnown RBP14.87□□□□□ -0.03
VIPAS39-203ENST00000448935 RICTORQ6R327 1708 aa14.86□□□□□ -0.03
VIPAS39-203ENST00000448935 SPHKAPQ2M3C7 1700 aa14.86□□□□□ -0.03
VIPAS39-203ENST00000448935 PLA2R1Q13018 1463 aa14.85□□□□□ -0.03
VIPAS39-203ENST00000448935 HSPA5P11021 654 aaKnown RBP14.85□□□□□ -0.03
VIPAS39-203ENST00000448935 MROH1Q8NDA8 1641 aa14.84□□□□□ -0.03
VIPAS39-203ENST00000448935 RALGAPBQ86X10 1494 aa14.84□□□□□ -0.03
VIPAS39-203ENST00000448935 TRPM2O94759 1503 aa14.84□□□□□ -0.03
VIPAS39-203ENST00000448935 ABCA6Q8N139 1617 aa14.84□□□□□ -0.03
VIPAS39-203ENST00000448935 LMTK2Q8IWU2 1503 aa14.83□□□□□ -0.04
VIPAS39-203ENST00000448935 FAM69CQ0P6D2 419 aa14.83□□□□□ -0.04
VIPAS39-203ENST00000448935 POLR1AO95602 1720 aaPredicted RBP14.82□□□□□ -0.04
VIPAS39-203ENST00000448935 DDX10Q13206 875 aaKnown RBP14.82□□□□□ -0.04
VIPAS39-203ENST00000448935 HIRIP3Q9BW71 556 aaPredicted RBP14.82□□□□□ -0.04
VIPAS39-203ENST00000448935 PTPRTO14522 1441 aa14.82□□□□□ -0.04
VIPAS39-203ENST00000448935 CENPBP07199 599 aaPredicted RBP14.81□□□□□ -0.04
VIPAS39-203ENST00000448935 CEP152O94986 1710 aa14.81□□□□□ -0.04
VIPAS39-203ENST00000448935 FRMPD1Q5SYB0 1578 aa14.81□□□□□ -0.04
VIPAS39-203ENST00000448935 EFCAB6Q5THR3 1501 aa14.81□□□□□ -0.04
VIPAS39-203ENST00000448935 DCAF11Q8TEB1 546 aa14.81□□□□□ -0.04
VIPAS39-203ENST00000448935 NEURL4Q96JN8 1562 aa14.8□□□□□ -0.04
VIPAS39-203ENST00000448935 DIP2CQ9Y2E4 1556 aa14.8□□□□□ -0.04
VIPAS39-203ENST00000448935 ZMYM4Q5VZL5 1548 aa14.8□□□□□ -0.04
VIPAS39-203ENST00000448935 SPATA31E1Q6ZUB1 1445 aa14.8□□□□□ -0.04
VIPAS39-203ENST00000448935 STAC3Q96MF2 364 aa14.8□□□□□ -0.04
VIPAS39-203ENST00000448935 ZNF326Q5BKZ1 582 aaKnown RBP14.79□□□□□ -0.04
VIPAS39-203ENST00000448935 PPRC1Q5VV67 1664 aaKnown RBP14.78□□□□□ -0.04
VIPAS39-203ENST00000448935 RAPGEF3O95398 923 aa14.77□□□□□ -0.04
VIPAS39-203ENST00000448935 VASPP50552 380 aaPredicted RBP14.77□□□□□ -0.04
VIPAS39-203ENST00000448935 TSPOAP1O95153 1857 aa14.77□□□□□ -0.04
VIPAS39-203ENST00000448935 KDM2AQ9Y2K7 1162 aa14.77□□□□□ -0.05
VIPAS39-203ENST00000448935 PRAG1Q86YV5 1406 aa14.76□□□□□ -0.05
VIPAS39-203ENST00000448935 TRPM1Q7Z4N2 1603 aa14.76□□□□□ -0.05
VIPAS39-203ENST00000448935 PROM2Q8N271 834 aa14.76□□□□□ -0.05
VIPAS39-203ENST00000448935 LAMC1P11047 1609 aa14.76□□□□□ -0.05
VIPAS39-203ENST00000448935 USP47Q96K76 1375 aa14.75□□□□□ -0.05
VIPAS39-203ENST00000448935 ZC3H13Q5T200 1668 aaKnown RBP14.75□□□□□ -0.05
VIPAS39-203ENST00000448935 KIF13AQ9H1H9 1805 aa14.75□□□□□ -0.05
VIPAS39-203ENST00000448935 CLTCL1P53675 1640 aa14.75□□□□□ -0.05
VIPAS39-203ENST00000448935 ANP32CO43423 234 aa14.74□□□□□ -0.05
VIPAS39-203ENST00000448935 RGL3Q3MIN7 710 aa14.74□□□□□ -0.05
VIPAS39-203ENST00000448935 KIF1BO60333 1816 aa14.74□□□□□ -0.05
VIPAS39-203ENST00000448935 ARID4BQ4LE39 1312 aaPredicted RBP14.74□□□□□ -0.05
VIPAS39-203ENST00000448935 WASHC2AQ641Q2 1341 aa14.74□□□□□ -0.05
VIPAS39-203ENST00000448935 CARD11Q9BXL7 1154 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms