RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 PIP4K2BP78356 416 aa28.89■■■□□ 2.22
CHCHD3-203ENST00000448878 DNMT1P26358 1616 aaKnown RBP28.89■■■□□ 2.22
CHCHD3-203ENST00000448878 WASHC2CQ9Y4E1 1318 aa28.88■■■□□ 2.21
CHCHD3-203ENST00000448878 TNRQ92752 1358 aa28.88■■■□□ 2.21
CHCHD3-203ENST00000448878 CEP162Q5TB80 1403 aa28.86■■■□□ 2.21
CHCHD3-203ENST00000448878 TOM1O60784 492 aa28.82■■■□□ 2.2
CHCHD3-203ENST00000448878 ANKLE2Q86XL3 938 aa28.82■■■□□ 2.2
CHCHD3-203ENST00000448878 CCDC141Q6ZP82 1450 aa28.82■■■□□ 2.2
CHCHD3-203ENST00000448878 RSPH4AQ5TD94 716 aa28.81■■■□□ 2.2
CHCHD3-203ENST00000448878 TSPY4P0CV99 314 aa28.8■■■□□ 2.2
CHCHD3-203ENST00000448878 TSPY10P0CW01 314 aa28.8■■■□□ 2.2
CHCHD3-203ENST00000448878 KDM5DQ9BY66 1539 aa28.79■■■□□ 2.2
CHCHD3-203ENST00000448878 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.79■■■□□ 2.2
CHCHD3-203ENST00000448878 THEMISQ8N1K5 641 aaPredicted RBP28.79■■■□□ 2.2
CHCHD3-203ENST00000448878 CAMSAP2Q08AD1 1489 aa28.78■■■□□ 2.2
CHCHD3-203ENST00000448878 POLR1AO95602 1720 aaPredicted RBP28.78■■■□□ 2.2
CHCHD3-203ENST00000448878 HSPA1LP34931 641 aa28.78■■■□□ 2.2
CHCHD3-203ENST00000448878 PZPP20742 1482 aa28.78■■■□□ 2.2
CHCHD3-203ENST00000448878 NCOA2Q15596 1464 aa28.77■■■□□ 2.2
CHCHD3-203ENST00000448878 SHANK2Q9UPX8 1470 aa28.76■■■□□ 2.19
CHCHD3-203ENST00000448878 CPS1P31327 1500 aa28.74■■■□□ 2.19
CHCHD3-203ENST00000448878 NEURL4Q96JN8 1562 aa28.73■■■□□ 2.19
CHCHD3-203ENST00000448878 MIA2Q96PC5 1412 aa28.73■■■□□ 2.19
CHCHD3-203ENST00000448878 UGGT1Q9NYU2 1555 aa28.71■■■□□ 2.19
CHCHD3-203ENST00000448878 FAM135AQ9P2D6 1515 aa28.69■■■□□ 2.18
CHCHD3-203ENST00000448878 NLRP1Q9C000 1473 aa28.68■■■□□ 2.18
CHCHD3-203ENST00000448878 SENP3Q9H4L4 574 aaPredicted RBP28.68■■■□□ 2.18
CHCHD3-203ENST00000448878 NPHP4O75161 1426 aaPredicted RBP28.67■■■□□ 2.18
CHCHD3-203ENST00000448878 ARHGEF5Q12774 1597 aa28.62■■■□□ 2.17
CHCHD3-203ENST00000448878 MED1Q15648 1581 aaPredicted RBP28.62■■■□□ 2.17
CHCHD3-203ENST00000448878 PHF23Q9BUL5 403 aaPredicted RBP28.61■■■□□ 2.17
CHCHD3-203ENST00000448878 VWDEQ8N2E2 1590 aa28.61■■■□□ 2.17
CHCHD3-203ENST00000448878 MED14O60244 1454 aa28.59■■■□□ 2.17
CHCHD3-203ENST00000448878 DEPDC5O75140 1603 aa28.58■■■□□ 2.17
CHCHD3-203ENST00000448878 IQGAP1P46940 1657 aa28.56■■■□□ 2.16
CHCHD3-203ENST00000448878 ABCC3O15438 1527 aa28.53■■■□□ 2.16
CHCHD3-203ENST00000448878 LRRC9Q6ZRR7 1453 aa28.53■■■□□ 2.16
CHCHD3-203ENST00000448878 RNF17Q9BXT8 1623 aaKnown RBP28.51■■■□□ 2.15
CHCHD3-203ENST00000448878 ZC3H13Q5T200 1668 aaKnown RBP28.51■■■□□ 2.15
CHCHD3-203ENST00000448878 CFAP65Q6ZU64 1925 aaKnown RBP28.5■■■□□ 2.15
CHCHD3-203ENST00000448878 ERVK-7P63135 1459 aa28.5■■■□□ 2.15
CHCHD3-203ENST00000448878 KANK4Q5T7N3 995 aaPredicted RBP28.48■■■□□ 2.15
CHCHD3-203ENST00000448878 MAST1Q9Y2H9 1570 aa28.48■■■□□ 2.15
CHCHD3-203ENST00000448878 LRRC7Q96NW7 1537 aa28.47■■■□□ 2.15
CHCHD3-203ENST00000448878 VPS8Q8N3P4 1428 aa28.46■■■□□ 2.15
CHCHD3-203ENST00000448878 EIF2AK4Q9P2K8 1649 aaKnown RBP28.46■■■□□ 2.15
CHCHD3-203ENST00000448878 CEP152O94986 1710 aa28.46■■■□□ 2.15
CHCHD3-203ENST00000448878 STRCP1A6NGW2 1772 aa28.45■■■□□ 2.15
CHCHD3-203ENST00000448878 ALKQ9UM73 1620 aa28.45■■■□□ 2.14
CHCHD3-203ENST00000448878 LOC105371045A0A1W2PR82 267 aa28.45■■■□□ 2.14
CHCHD3-203ENST00000448878 TXNDC2Q86VQ3 553 aa28.45■■■□□ 2.14
CHCHD3-203ENST00000448878 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.44■■■□□ 2.141e-7■■□□□ 12
CHCHD3-203ENST00000448878 LTKP29376 864 aa28.41■■■□□ 2.14
CHCHD3-203ENST00000448878 RRP7BPQ9NSQ0 103 aa28.41■■■□□ 2.14
CHCHD3-203ENST00000448878 STAG3Q9UJ98 1225 aa28.41■■■□□ 2.14
CHCHD3-203ENST00000448878 EID1Q9Y6B2 187 aa28.41■■■□□ 2.14
CHCHD3-203ENST00000448878 MYOM3Q5VTT5 1437 aa28.41■■■□□ 2.14
CHCHD3-203ENST00000448878 SCAF11Q99590 1463 aaKnown RBP28.4■■■□□ 2.14
CHCHD3-203ENST00000448878 DUOX2Q9NRD8 1548 aa28.4■■■□□ 2.14
CHCHD3-203ENST00000448878 UBR1Q8IWV7 1749 aa28.4■■■□□ 2.14
CHCHD3-203ENST00000448878 MROH1Q8NDA8 1641 aa28.4■■■□□ 2.14
CHCHD3-203ENST00000448878 SYNMO15061 1565 aa28.39■■■□□ 2.14
CHCHD3-203ENST00000448878 KIF15Q9NS87 1388 aa28.36■■■□□ 2.13
CHCHD3-203ENST00000448878 APLP2Q06481 763 aa28.32■■■□□ 2.12
CHCHD3-203ENST00000448878 KANK1Q14678 1352 aa28.3■■■□□ 2.12
CHCHD3-203ENST00000448878 SLIT1O75093 1534 aa28.29■■■□□ 2.12
CHCHD3-203ENST00000448878 MAP3K1Q13233 1512 aa28.29■■■□□ 2.12
CHCHD3-203ENST00000448878 ARHGAP23Q9P227 1491 aa28.28■■■□□ 2.12
CHCHD3-203ENST00000448878 ARHGAP31Q2M1Z3 1444 aa28.28■■■□□ 2.12
CHCHD3-203ENST00000448878 ERBINQ96RT1 1412 aa28.27■■■□□ 2.12
CHCHD3-203ENST00000448878 ABCC5O15440 1437 aa28.26■■■□□ 2.12
CHCHD3-203ENST00000448878 CHIC2Q9UKJ5 165 aa28.26■■■□□ 2.11
CHCHD3-203ENST00000448878 PRDM15P57071 1507 aaPredicted RBP28.26■■■□□ 2.11
CHCHD3-203ENST00000448878 PIK3C2BO00750 1634 aa28.25■■■□□ 2.11
CHCHD3-203ENST00000448878 TMEM2Q9UHN6 1383 aa28.24■■■□□ 2.11
CHCHD3-203ENST00000448878 BCANQ96GW7 911 aa28.23■■■□□ 2.11
CHCHD3-203ENST00000448878 PTPN23Q9H3S7 1636 aa28.22■■■□□ 2.11
CHCHD3-203ENST00000448878 IDI1Q13907 227 aa28.22■■■□□ 2.11
CHCHD3-203ENST00000448878 SLC26A8Q96RN1 970 aa28.22■■■□□ 2.11
CHCHD3-203ENST00000448878 PROSER2Q86WR7 435 aaPredicted RBP28.21■■■□□ 2.11
CHCHD3-203ENST00000448878 RBM33Q96EV2 1170 aaKnown RBP28.21■■■□□ 2.11
CHCHD3-203ENST00000448878 CROCC2H7BZ55 1655 aa28.21■■■□□ 2.11
CHCHD3-203ENST00000448878 XIRP1Q702N8 1843 aaKnown RBP28.2■■■□□ 2.11
CHCHD3-203ENST00000448878 DAPK1P53355 1430 aa28.19■■■□□ 2.1
CHCHD3-203ENST00000448878 RGS17Q9UGC6 210 aaPredicted RBP28.19■■■□□ 2.1
CHCHD3-203ENST00000448878 TMEM94Q12767 1356 aa28.18■■■□□ 2.1
CHCHD3-203ENST00000448878 KCNA6P17658 529 aa28.17■■■□□ 2.1
CHCHD3-203ENST00000448878 EFCAB6Q5THR3 1501 aa28.17■■■□□ 2.1
CHCHD3-203ENST00000448878 ANKRD30AQ9BXX3 1397 aa28.16■■■□□ 2.1
CHCHD3-203ENST00000448878 FAM135BQ49AJ0 1406 aa28.15■■■□□ 2.1
CHCHD3-203ENST00000448878 FGD6Q6ZV73 1430 aa28.1■■■□□ 2.09
CHCHD3-203ENST00000448878 LMTK2Q8IWU2 1503 aa28.07■■■□□ 2.08
CHCHD3-203ENST00000448878 KDM5AP29375 1690 aaKnown RBP28.07■■■□□ 2.08
CHCHD3-203ENST00000448878 SLC52A1Q9NWF4 448 aa28.06■■■□□ 2.08
CHCHD3-203ENST00000448878 ROBO1Q9Y6N7 1651 aa28.06■■■□□ 2.08
CHCHD3-203ENST00000448878 POTEAQ6S8J7 498 aa28.05■■■□□ 2.08
CHCHD3-203ENST00000448878 TET3O43151 1660 aa28.04■■■□□ 2.08
CHCHD3-203ENST00000448878 MSH6P52701 1360 aa28.04■■■□□ 2.08
CHCHD3-203ENST00000448878 PPP1R15AO75807 674 aaPredicted RBP28.04■■■□□ 2.08
CHCHD3-203ENST00000448878 FAM50AQ14320 339 aaKnown RBP28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms