RNA–Protein interactions for RNA: ENST00000448141.6

CCHCR1-206, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-206ENST00000448141 NCOA1Q15788 1441 aa31.45■■■□□ 2.63
CCHCR1-206ENST00000448141 PTPRKQ15262 1439 aa31.44■■■□□ 2.62
CCHCR1-206ENST00000448141 RRBP1Q9P2E9 1410 aaKnown RBP31.44■■■□□ 2.62
CCHCR1-206ENST00000448141 RNF17Q9BXT8 1623 aaKnown RBP31.44■■■□□ 2.62
CCHCR1-206ENST00000448141 PPP6R1Q9UPN7 881 aa31.41■■■□□ 2.62
CCHCR1-206ENST00000448141 ERBINQ96RT1 1412 aa31.41■■■□□ 2.62
CCHCR1-206ENST00000448141 ITGAEP38570 1179 aa31.4■■■□□ 2.62
CCHCR1-206ENST00000448141 KDM5DQ9BY66 1539 aa31.37■■■□□ 2.61
CCHCR1-206ENST00000448141 MROH1Q8NDA8 1641 aa31.36■■■□□ 2.61
CCHCR1-206ENST00000448141 ZMYM3Q14202 1370 aa31.36■■■□□ 2.61
CCHCR1-206ENST00000448141 FAM135AQ9P2D6 1515 aa31.35■■■□□ 2.61
CCHCR1-206ENST00000448141 PREX1Q8TCU6 1659 aa31.32■■■□□ 2.6
CCHCR1-206ENST00000448141 WASHC2CQ9Y4E1 1318 aa31.32■■■□□ 2.6
CCHCR1-206ENST00000448141 ROCK1Q13464 1354 aa31.3■■■□□ 2.6
CCHCR1-206ENST00000448141 ZC3H13Q5T200 1668 aaKnown RBP31.3■■■□□ 2.6
CCHCR1-206ENST00000448141 LMTK3Q96Q04 1460 aa31.3■■■□□ 2.6
CCHCR1-206ENST00000448141 DEPDC5O75140 1603 aa31.3■■■□□ 2.6
CCHCR1-206ENST00000448141 CEP152O94986 1710 aa31.28■■■□□ 2.6
CCHCR1-206ENST00000448141 ABCC3O15438 1527 aa31.28■■■□□ 2.6
CCHCR1-206ENST00000448141 PRDM15P57071 1507 aaPredicted RBP31.28■■■□□ 2.6
CCHCR1-206ENST00000448141 ANKRD50Q9ULJ7 1429 aa31.27■■■□□ 2.6
CCHCR1-206ENST00000448141 SETD1BQ9UPS6 1966 aaKnown RBP31.26■■■□□ 2.6
CCHCR1-206ENST00000448141 NPATQ14207 1427 aa31.24■■■□□ 2.59
CCHCR1-206ENST00000448141 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.23■■■□□ 2.59
CCHCR1-206ENST00000448141 CAMSAP1Q5T5Y3 1602 aa31.2■■■□□ 2.59
CCHCR1-206ENST00000448141 PZPP20742 1482 aa31.2■■■□□ 2.58
CCHCR1-206ENST00000448141 UHRF1BP1Q6BDS2 1440 aa31.19■■■□□ 2.58
CCHCR1-206ENST00000448141 KANK1Q14678 1352 aa31.17■■■□□ 2.58
CCHCR1-206ENST00000448141 VWDEQ8N2E2 1590 aa31.15■■■□□ 2.58
CCHCR1-206ENST00000448141 MYO3AQ8NEV4 1616 aa31.14■■■□□ 2.58
CCHCR1-206ENST00000448141 HSPA2P54652 639 aa31.14■■■□□ 2.58
CCHCR1-206ENST00000448141 FBXO31Q5XUX0 539 aaPredicted RBP31.14■■■□□ 2.58
CCHCR1-206ENST00000448141 UNC13BO14795 1591 aa31.13■■■□□ 2.57
CCHCR1-206ENST00000448141 GCC2Q8IWJ2 1684 aa31.11■■■□□ 2.57
CCHCR1-206ENST00000448141 CFAP65Q6ZU64 1925 aaKnown RBP31.1■■■□□ 2.57
CCHCR1-206ENST00000448141 LMTK2Q8IWU2 1503 aa31.08■■■□□ 2.57
CCHCR1-206ENST00000448141 TNRQ92752 1358 aa31.08■■■□□ 2.57
CCHCR1-206ENST00000448141 ZNF142P52746 1687 aaPredicted RBP31.07■■■□□ 2.56
CCHCR1-206ENST00000448141 NAIPQ13075 1403 aa31.06■■■□□ 2.56
CCHCR1-206ENST00000448141 ARHGAP31Q2M1Z3 1444 aa31.05■■■□□ 2.56
CCHCR1-206ENST00000448141 CEP170BQ9Y4F5 1589 aaPredicted RBP31.05■■■□□ 2.56
CCHCR1-206ENST00000448141 ERVK-7P63135 1459 aa31.04■■■□□ 2.56
CCHCR1-206ENST00000448141 SPATA31D1Q6ZQQ2 1576 aa31.04■■■□□ 2.56
CCHCR1-206ENST00000448141 EFCAB6Q5THR3 1501 aa31.03■■■□□ 2.56
CCHCR1-206ENST00000448141 HFM1A2PYH4 1435 aa31.01■■■□□ 2.55
CCHCR1-206ENST00000448141 TET3O43151 1660 aa31■■■□□ 2.55
CCHCR1-206ENST00000448141 IQGAP3Q86VI3 1631 aa31■■■□□ 2.55
CCHCR1-206ENST00000448141 A2ML1A8K2U0 1454 aa30.98■■■□□ 2.55
CCHCR1-206ENST00000448141 NUP155O75694 1391 aa30.96■■■□□ 2.55
CCHCR1-206ENST00000448141 NLRP1Q9C000 1473 aa30.95■■■□□ 2.55
CCHCR1-206ENST00000448141 STRCQ7RTU9 1775 aa30.95■■■□□ 2.55
CCHCR1-206ENST00000448141 E9PCH4 1651 aa30.9■■■□□ 2.54
CCHCR1-206ENST00000448141 RPRD2Q5VT52 1461 aaKnown RBP30.89■■■□□ 2.53
CCHCR1-206ENST00000448141 SYNMO15061 1565 aa30.87■■■□□ 2.53
CCHCR1-206ENST00000448141 UGGT1Q9NYU2 1555 aa30.86■■■□□ 2.53
CCHCR1-206ENST00000448141 NOS1P29475 1434 aa30.84■■■□□ 2.53
CCHCR1-206ENST00000448141 PLA2R1Q13018 1463 aa30.83■■■□□ 2.53
CCHCR1-206ENST00000448141 UBR1Q8IWV7 1749 aa30.82■■■□□ 2.52
CCHCR1-206ENST00000448141 PIK3C2BO00750 1634 aa30.81■■■□□ 2.52
CCHCR1-206ENST00000448141 TRIM52Q96A61 297 aa30.8■■■□□ 2.52
CCHCR1-206ENST00000448141 THEMISQ8N1K5 641 aaPredicted RBP30.79■■■□□ 2.52
CCHCR1-206ENST00000448141 NCKAP5LQ9HCH0 1330 aa30.78■■■□□ 2.52
CCHCR1-206ENST00000448141 POLR1AO95602 1720 aaPredicted RBP30.76■■■□□ 2.52
CCHCR1-206ENST00000448141 DMRT2Q9Y5R5 561 aa30.76■■■□□ 2.51
CCHCR1-206ENST00000448141 SETD5Q9C0A6 1442 aa30.75■■■□□ 2.51
CCHCR1-206ENST00000448141 IDI1Q13907 227 aa30.74■■■□□ 2.51
CCHCR1-206ENST00000448141 KDM5AP29375 1690 aaKnown RBP30.72■■■□□ 2.51
CCHCR1-206ENST00000448141 PKD2Q13563 968 aa30.72■■■□□ 2.51
CCHCR1-206ENST00000448141 SPHKAPQ2M3C7 1700 aa30.71■■■□□ 2.51
CCHCR1-206ENST00000448141 SLC52A1Q9NWF4 448 aa30.71■■■□□ 2.51
CCHCR1-206ENST00000448141 PTPRTO14522 1441 aa30.71■■■□□ 2.51
CCHCR1-206ENST00000448141 STAG3Q9UJ98 1225 aa30.69■■■□□ 2.5
CCHCR1-206ENST00000448141 ADGRB3O60242 1522 aa30.68■■■□□ 2.5
CCHCR1-206ENST00000448141 NEURL4Q96JN8 1562 aa30.67■■■□□ 2.5
CCHCR1-206ENST00000448141 ANKLE2Q86XL3 938 aa30.66■■■□□ 2.5
CCHCR1-206ENST00000448141 SLC4A1APQ9BWU0 796 aaKnown RBP30.66■■■□□ 2.5
CCHCR1-206ENST00000448141 MYO5BQ9ULV0 1848 aa30.66■■■□□ 2.5
CCHCR1-206ENST00000448141 RAB3GAP2Q9H2M9 1393 aa30.65■■■□□ 2.5
CCHCR1-206ENST00000448141 SLIT1O75093 1534 aa30.63■■■□□ 2.49
CCHCR1-206ENST00000448141 ARHGAP23Q9P227 1491 aa30.63■■■□□ 2.49
CCHCR1-206ENST00000448141 TMEM131LA2VDJ0 1609 aa30.62■■■□□ 2.49
CCHCR1-206ENST00000448141 TMEM2Q9UHN6 1383 aa30.59■■■□□ 2.49
CCHCR1-206ENST00000448141 ACIN1Q9UKV3 1341 aaKnown RBP30.58■■■□□ 2.49
CCHCR1-206ENST00000448141 TRPM2O94759 1503 aa30.57■■■□□ 2.49
CCHCR1-206ENST00000448141 IQGAP1P46940 1657 aa30.57■■■□□ 2.48
CCHCR1-206ENST00000448141 MED14O60244 1454 aa30.57■■■□□ 2.48
CCHCR1-206ENST00000448141 SCAF11Q99590 1463 aaKnown RBP30.57■■■□□ 2.48
CCHCR1-206ENST00000448141 NPHP4O75161 1426 aaPredicted RBP30.56■■■□□ 2.48
CCHCR1-206ENST00000448141 CHGAP10645 457 aaKnown RBP30.55■■■□□ 2.48
CCHCR1-206ENST00000448141 LTKP29376 864 aa30.55■■■□□ 2.48
CCHCR1-206ENST00000448141 MPHOSPH9Q99550 1183 aa30.55■■■□□ 2.48
CCHCR1-206ENST00000448141 CLTCL1P53675 1640 aa30.55■■■□□ 2.48
CCHCR1-206ENST00000448141 TXNDC2Q86VQ3 553 aa30.54■■■□□ 2.48
CCHCR1-206ENST00000448141 EID1Q9Y6B2 187 aa30.54■■■□□ 2.48
CCHCR1-206ENST00000448141 FOXD1Q16676 465 aa30.52■■■□□ 2.48
CCHCR1-206ENST00000448141 KIF1BO60333 1816 aa30.48■■■□□ 2.47
CCHCR1-206ENST00000448141 RIMS2Q9UQ26 1411 aa30.47■■■□□ 2.47
CCHCR1-206ENST00000448141 ZFYVE9O95405 1425 aa30.46■■■□□ 2.47
CCHCR1-206ENST00000448141 ZNF335Q9H4Z2 1342 aaPredicted RBP30.45■■■□□ 2.46
CCHCR1-206ENST00000448141 LTBP4Q8N2S1 1624 aa30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 176.3 ms