RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 ANKRD30AQ9BXX3 1397 aa38.39■■■■□ 3.74
UFD1-204ENST00000447868 PREX1Q8TCU6 1659 aa38.38■■■■□ 3.73
UFD1-204ENST00000447868 RNF17Q9BXT8 1623 aaKnown RBP38.34■■■■□ 3.73
UFD1-204ENST00000447868 SETD1BQ9UPS6 1966 aaKnown RBP38.34■■■■□ 3.73
UFD1-204ENST00000447868 HSPA2P54652 639 aa38.34■■■■□ 3.73
UFD1-204ENST00000447868 KDM5DQ9BY66 1539 aa38.33■■■■□ 3.73
UFD1-204ENST00000447868 WASHC2CQ9Y4E1 1318 aa38.33■■■■□ 3.73
UFD1-204ENST00000447868 NCOA1Q15788 1441 aa38.31■■■■□ 3.72
UFD1-204ENST00000447868 ERBINQ96RT1 1412 aa38.3■■■■□ 3.72
UFD1-204ENST00000447868 UHRF1BP1Q6BDS2 1440 aa38.29■■■■□ 3.72
UFD1-204ENST00000447868 ADGRL2O95490 1459 aa38.29■■■■□ 3.72
UFD1-204ENST00000447868 FAM135AQ9P2D6 1515 aa38.28■■■■□ 3.72
UFD1-204ENST00000447868 NPATQ14207 1427 aa38.27■■■■□ 3.72
UFD1-204ENST00000447868 PTPRKQ15262 1439 aa38.27■■■■□ 3.72
UFD1-204ENST00000447868 ITGAEP38570 1179 aa38.25■■■■□ 3.71
UFD1-204ENST00000447868 MROH1Q8NDA8 1641 aa38.25■■■■□ 3.71
UFD1-204ENST00000447868 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.21■■■■□ 3.71
UFD1-204ENST00000447868 ABCC3O15438 1527 aa38.2■■■■□ 3.71
UFD1-204ENST00000447868 ZC3H13Q5T200 1668 aaKnown RBP38.18■■■■□ 3.7
UFD1-204ENST00000447868 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.17■■■■□ 3.71e-6■□□□□ 11
UFD1-204ENST00000447868 RRBP1Q9P2E9 1410 aaKnown RBP38.17■■■■□ 3.7
UFD1-204ENST00000447868 CEP152O94986 1710 aa38.16■■■■□ 3.7
UFD1-204ENST00000447868 PZPP20742 1482 aa38.15■■■■□ 3.7
UFD1-204ENST00000447868 FBXO31Q5XUX0 539 aaPredicted RBP38.15■■■■□ 3.7
UFD1-204ENST00000447868 PRDM15P57071 1507 aaPredicted RBP38.14■■■■□ 3.7
UFD1-204ENST00000447868 DEPDC5O75140 1603 aa38.13■■■■□ 3.69
UFD1-204ENST00000447868 MYO3AQ8NEV4 1616 aa38.11■■■■□ 3.69
UFD1-204ENST00000447868 ANKRD50Q9ULJ7 1429 aa38.11■■■■□ 3.69
UFD1-204ENST00000447868 ROCK1Q13464 1354 aa38.1■■■■□ 3.69
UFD1-204ENST00000447868 CAMSAP1Q5T5Y3 1602 aa38.08■■■■□ 3.69
UFD1-204ENST00000447868 KANK1Q14678 1352 aa38.07■■■■□ 3.69
UFD1-204ENST00000447868 TNRQ92752 1358 aa38.06■■■■□ 3.68
UFD1-204ENST00000447868 CEP170BQ9Y4F5 1589 aaPredicted RBP38.02■■■■□ 3.68
UFD1-204ENST00000447868 ZNF142P52746 1687 aaPredicted RBP38.01■■■■□ 3.68
UFD1-204ENST00000447868 CFAP65Q6ZU64 1925 aaKnown RBP37.99■■■■□ 3.67
UFD1-204ENST00000447868 VWDEQ8N2E2 1590 aa37.97■■■■□ 3.67
UFD1-204ENST00000447868 STRCQ7RTU9 1775 aa37.96■■■■□ 3.67
UFD1-204ENST00000447868 A2ML1A8K2U0 1454 aa37.94■■■■□ 3.66
UFD1-204ENST00000447868 ERVK-7P63135 1459 aa37.94■■■■□ 3.66
UFD1-204ENST00000447868 SPATA31D1Q6ZQQ2 1576 aa37.93■■■■□ 3.66
UFD1-204ENST00000447868 LMTK2Q8IWU2 1503 aa37.92■■■■□ 3.66
UFD1-204ENST00000447868 ARHGAP31Q2M1Z3 1444 aa37.91■■■■□ 3.66
UFD1-204ENST00000447868 UNC13BO14795 1591 aa37.88■■■■□ 3.65
UFD1-204ENST00000447868 NLRP1Q9C000 1473 aa37.86■■■■□ 3.65
UFD1-204ENST00000447868 EFCAB6Q5THR3 1501 aa37.82■■■■□ 3.65
UFD1-204ENST00000447868 DMRT2Q9Y5R5 561 aa37.82■■■■□ 3.64
UFD1-204ENST00000447868 NCKAP5LQ9HCH0 1330 aa37.8■■■■□ 3.64
UFD1-204ENST00000447868 PLA2R1Q13018 1463 aa37.78■■■■□ 3.64
UFD1-204ENST00000447868 UGGT1Q9NYU2 1555 aa37.78■■■■□ 3.64
UFD1-204ENST00000447868 TET3O43151 1660 aa37.76■■■■□ 3.64
UFD1-204ENST00000447868 NAIPQ13075 1403 aa37.76■■■■□ 3.63
UFD1-204ENST00000447868 GCC2Q8IWJ2 1684 aa37.75■■■■□ 3.63
UFD1-204ENST00000447868 NUP155O75694 1391 aa37.74■■■■□ 3.63
UFD1-204ENST00000447868 PTPRTO14522 1441 aa37.73■■■■□ 3.63
UFD1-204ENST00000447868 THEMISQ8N1K5 641 aaPredicted RBP37.73■■■■□ 3.63
UFD1-204ENST00000447868 IQGAP3Q86VI3 1631 aa37.72■■■■□ 3.63
UFD1-204ENST00000447868 PKD2Q13563 968 aa37.71■■■■□ 3.63
UFD1-204ENST00000447868 RPRD2Q5VT52 1461 aaKnown RBP37.68■■■■□ 3.62
UFD1-204ENST00000447868 HFM1A2PYH4 1435 aa37.68■■■■□ 3.62
UFD1-204ENST00000447868 SYNMO15061 1565 aa37.68■■■■□ 3.62
UFD1-204ENST00000447868 NOS1P29475 1434 aa37.67■■■■□ 3.62
UFD1-204ENST00000447868 UBR1Q8IWV7 1749 aa37.66■■■■□ 3.62
UFD1-204ENST00000447868 POLR1AO95602 1720 aaPredicted RBP37.64■■■■□ 3.62
UFD1-204ENST00000447868 E9PCH4 1651 aa37.63■■■■□ 3.62
UFD1-204ENST00000447868 PIK3C2BO00750 1634 aa37.63■■■■□ 3.61
UFD1-204ENST00000447868 ANKLE2Q86XL3 938 aa37.61■■■■□ 3.61
UFD1-204ENST00000447868 IDI1Q13907 227 aa37.6■■■■□ 3.61
UFD1-204ENST00000447868 STAG3Q9UJ98 1225 aa37.59■■■■□ 3.61
UFD1-204ENST00000447868 NEURL4Q96JN8 1562 aa37.56■■■■□ 3.6
UFD1-204ENST00000447868 TRIM52Q96A61 297 aa37.54■■■■□ 3.6
UFD1-204ENST00000447868 SLC52A1Q9NWF4 448 aa37.53■■■■□ 3.6
UFD1-204ENST00000447868 KDM5AP29375 1690 aaKnown RBP37.47■■■■□ 3.59
UFD1-204ENST00000447868 ADGRB3O60242 1522 aa37.46■■■■□ 3.59
UFD1-204ENST00000447868 SLIT1O75093 1534 aa37.46■■■■□ 3.59
UFD1-204ENST00000447868 NPHP4O75161 1426 aaPredicted RBP37.46■■■■□ 3.59
UFD1-204ENST00000447868 CERKQ8TCT0 537 aa37.46■■■■□ 3.59
UFD1-204ENST00000447868 ARHGAP23Q9P227 1491 aa37.45■■■■□ 3.59
UFD1-204ENST00000447868 MED14O60244 1454 aa37.44■■■■□ 3.58
UFD1-204ENST00000447868 ZNF335Q9H4Z2 1342 aaPredicted RBP37.43■■■■□ 3.58
UFD1-204ENST00000447868 TXNDC2Q86VQ3 553 aa37.43■■■■□ 3.58
UFD1-204ENST00000447868 TMEM2Q9UHN6 1383 aa37.42■■■■□ 3.58
UFD1-204ENST00000447868 SCAF11Q99590 1463 aaKnown RBP37.42■■■■□ 3.58
UFD1-204ENST00000447868 IQGAP1P46940 1657 aa37.41■■■■□ 3.58
UFD1-204ENST00000447868 LTKP29376 864 aa37.41■■■■□ 3.58
UFD1-204ENST00000447868 LTBP4Q8N2S1 1624 aa37.4■■■■□ 3.58
UFD1-204ENST00000447868 ILDR1Q86SU0 546 aaPredicted RBP37.4■■■■□ 3.58
UFD1-204ENST00000447868 EID1Q9Y6B2 187 aa37.4■■■■□ 3.58
UFD1-204ENST00000447868 SPHKAPQ2M3C7 1700 aa37.39■■■■□ 3.58
UFD1-204ENST00000447868 MYO5BQ9ULV0 1848 aa37.38■■■■□ 3.58
UFD1-204ENST00000447868 CHGAP10645 457 aaKnown RBP37.38■■■■□ 3.57
UFD1-204ENST00000447868 SLC4A1APQ9BWU0 796 aaKnown RBP37.35■■■■□ 3.57
UFD1-204ENST00000447868 TMEM131LA2VDJ0 1609 aa37.35■■■■□ 3.57
UFD1-204ENST00000447868 SETD5Q9C0A6 1442 aa37.33■■■■□ 3.57
UFD1-204ENST00000447868 FBXO41Q8TF61 875 aa37.3■■■■□ 3.56
UFD1-204ENST00000447868 RIMS2Q9UQ26 1411 aa37.24■■■■□ 3.55
UFD1-204ENST00000447868 TRPM2O94759 1503 aa37.24■■■■□ 3.55
UFD1-204ENST00000447868 ZFYVE9O95405 1425 aa37.22■■■■□ 3.55
UFD1-204ENST00000447868 CLTCL1P53675 1640 aa37.21■■■■□ 3.55
UFD1-204ENST00000447868 RAB3GAP2Q9H2M9 1393 aa37.21■■■■□ 3.55
UFD1-204ENST00000447868 FOXD1Q16676 465 aa37.2■■■■□ 3.55
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms