RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 MROH2AA6NES4 1674 aa17.49■□□□□ 0.39
LINC00408-201ENST00000447784 DAPK1P53355 1430 aa17.49■□□□□ 0.39
LINC00408-201ENST00000447784 FAM135AQ9P2D6 1515 aa17.49■□□□□ 0.39
LINC00408-201ENST00000447784 C3P01024 1663 aa17.48■□□□□ 0.39
LINC00408-201ENST00000447784 KIF15Q9NS87 1388 aa17.46■□□□□ 0.39
LINC00408-201ENST00000447784 DUOX2Q9NRD8 1548 aa17.46■□□□□ 0.39
LINC00408-201ENST00000447784 WASHC2CQ9Y4E1 1318 aa17.46■□□□□ 0.38
LINC00408-201ENST00000447784 PREX1Q8TCU6 1659 aa17.45■□□□□ 0.38
LINC00408-201ENST00000447784 ANKRD30AQ9BXX3 1397 aa17.45■□□□□ 0.38
LINC00408-201ENST00000447784 DNMT1P26358 1616 aaKnown RBP17.45■□□□□ 0.38
LINC00408-201ENST00000447784 PTPRKQ15262 1439 aa17.45■□□□□ 0.38
LINC00408-201ENST00000447784 RRP7BPQ9NSQ0 103 aa17.44■□□□□ 0.38
LINC00408-201ENST00000447784 KDM5DQ9BY66 1539 aa17.43■□□□□ 0.38
LINC00408-201ENST00000447784 TRIM26Q12899 539 aaPredicted RBP17.43■□□□□ 0.38
LINC00408-201ENST00000447784 SETD1BQ9UPS6 1966 aaKnown RBP17.42■□□□□ 0.38
LINC00408-201ENST00000447784 CLTCQ00610 1675 aaKnown RBP17.42■□□□□ 0.38
LINC00408-201ENST00000447784 ERBINQ96RT1 1412 aa17.42■□□□□ 0.38
LINC00408-201ENST00000447784 EIF2AK4Q9P2K8 1649 aaKnown RBP17.42■□□□□ 0.38
LINC00408-201ENST00000447784 NCOA1Q15788 1441 aa17.41■□□□□ 0.38
LINC00408-201ENST00000447784 CROCC2H7BZ55 1655 aa17.4■□□□□ 0.38
LINC00408-201ENST00000447784 RNF17Q9BXT8 1623 aaKnown RBP17.39■□□□□ 0.38
LINC00408-201ENST00000447784 ADGRL2O95490 1459 aa17.39■□□□□ 0.37
LINC00408-201ENST00000447784 PZPP20742 1482 aa17.39■□□□□ 0.37
LINC00408-201ENST00000447784 ROCK1Q13464 1354 aa17.39■□□□□ 0.37
LINC00408-201ENST00000447784 DMRT2Q9Y5R5 561 aa17.38■□□□□ 0.37
LINC00408-201ENST00000447784 FBXO31Q5XUX0 539 aaPredicted RBP17.36■□□□□ 0.37
LINC00408-201ENST00000447784 TNRQ92752 1358 aa17.35■□□□□ 0.37
LINC00408-201ENST00000447784 ABCC3O15438 1527 aa17.35■□□□□ 0.37
LINC00408-201ENST00000447784 MROH1Q8NDA8 1641 aa17.35■□□□□ 0.37
LINC00408-201ENST00000447784 PRDM15P57071 1507 aaPredicted RBP17.32■□□□□ 0.36
LINC00408-201ENST00000447784 ZC3H13Q5T200 1668 aaKnown RBP17.32■□□□□ 0.36
LINC00408-201ENST00000447784 KANK1Q14678 1352 aa17.31■□□□□ 0.36
LINC00408-201ENST00000447784 A2ML1A8K2U0 1454 aa17.31■□□□□ 0.36
LINC00408-201ENST00000447784 PTPRTO14522 1441 aa17.3■□□□□ 0.36
LINC00408-201ENST00000447784 ARHGAP31Q2M1Z3 1444 aa17.3■□□□□ 0.36
LINC00408-201ENST00000447784 ANKRD50Q9ULJ7 1429 aa17.3■□□□□ 0.36
LINC00408-201ENST00000447784 MYO3AQ8NEV4 1616 aa17.3■□□□□ 0.36
LINC00408-201ENST00000447784 CEP170BQ9Y4F5 1589 aaPredicted RBP17.3■□□□□ 0.36
LINC00408-201ENST00000447784 PLA2R1Q13018 1463 aa17.3■□□□□ 0.36
LINC00408-201ENST00000447784 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.29■□□□□ 0.36
LINC00408-201ENST00000447784 NLRP1Q9C000 1473 aa17.29■□□□□ 0.36
LINC00408-201ENST00000447784 ZNF142P52746 1687 aaPredicted RBP17.29■□□□□ 0.36
LINC00408-201ENST00000447784 ADRA2BP18089 450 aa17.28■□□□□ 0.36
LINC00408-201ENST00000447784 PKD2Q13563 968 aa17.28■□□□□ 0.36
LINC00408-201ENST00000447784 DEPDC5O75140 1603 aa17.28■□□□□ 0.36
LINC00408-201ENST00000447784 CAMSAP1Q5T5Y3 1602 aa17.28■□□□□ 0.36
LINC00408-201ENST00000447784 HFM1A2PYH4 1435 aa17.27■□□□□ 0.35
LINC00408-201ENST00000447784 STRCQ7RTU9 1775 aa17.27■□□□□ 0.35
LINC00408-201ENST00000447784 SPATA31D1Q6ZQQ2 1576 aa17.27■□□□□ 0.35
LINC00408-201ENST00000447784 LMTK2Q8IWU2 1503 aa17.26■□□□□ 0.35
LINC00408-201ENST00000447784 ERVK-7P63135 1459 aa17.26■□□□□ 0.35
LINC00408-201ENST00000447784 VWDEQ8N2E2 1590 aa17.25■□□□□ 0.35
LINC00408-201ENST00000447784 THEMISQ8N1K5 641 aaPredicted RBP17.25■□□□□ 0.35
LINC00408-201ENST00000447784 PCGF6Q9BYE7 350 aa17.25■□□□□ 0.35
LINC00408-201ENST00000447784 NAIPQ13075 1403 aa17.24■□□□□ 0.35
LINC00408-201ENST00000447784 NCKAP5LQ9HCH0 1330 aa17.23■□□□□ 0.35
LINC00408-201ENST00000447784 ACIN1Q9UKV3 1341 aaKnown RBP17.23■□□□□ 0.35
LINC00408-201ENST00000447784 SETD5Q9C0A6 1442 aa17.22■□□□□ 0.35
LINC00408-201ENST00000447784 TRIM52Q96A61 297 aa17.22■□□□□ 0.35
LINC00408-201ENST00000447784 UGGT1Q9NYU2 1555 aa17.2■□□□□ 0.34
LINC00408-201ENST00000447784 CERKQ8TCT0 537 aa17.2■□□□□ 0.34
LINC00408-201ENST00000447784 FBXO41Q8TF61 875 aa17.2■□□□□ 0.34
LINC00408-201ENST00000447784 CEP152O94986 1710 aa17.2■□□□□ 0.34
LINC00408-201ENST00000447784 ANKLE2Q86XL3 938 aa17.19■□□□□ 0.34
LINC00408-201ENST00000447784 NUP155O75694 1391 aa17.17■□□□□ 0.34
LINC00408-201ENST00000447784 PIAS4Q8N2W9 510 aaPredicted RBP17.17■□□□□ 0.34
LINC00408-201ENST00000447784 RPRD2Q5VT52 1461 aaKnown RBP17.17■□□□□ 0.34
LINC00408-201ENST00000447784 EFCAB6Q5THR3 1501 aa17.16■□□□□ 0.34
LINC00408-201ENST00000447784 RAB3GAP2Q9H2M9 1393 aa17.16■□□□□ 0.34
LINC00408-201ENST00000447784 NOS1P29475 1434 aa17.16■□□□□ 0.34
LINC00408-201ENST00000447784 HRCP23327 699 aa17.16■□□□□ 0.34
LINC00408-201ENST00000447784 UNC13BO14795 1591 aa17.14■□□□□ 0.33
LINC00408-201ENST00000447784 IDI1Q13907 227 aa17.13■□□□□ 0.33
LINC00408-201ENST00000447784 SLC52A1Q9NWF4 448 aa17.13■□□□□ 0.33
LINC00408-201ENST00000447784 MED14O60244 1454 aa17.12■□□□□ 0.33
LINC00408-201ENST00000447784 LTBP4Q8N2S1 1624 aa17.1■□□□□ 0.33
LINC00408-201ENST00000447784 SLC4A1APQ9BWU0 796 aaKnown RBP17.1■□□□□ 0.33
LINC00408-201ENST00000447784 NEURL4Q96JN8 1562 aa17.1■□□□□ 0.33
LINC00408-201ENST00000447784 STAG3Q9UJ98 1225 aa17.09■□□□□ 0.33
LINC00408-201ENST00000447784 ZNF335Q9H4Z2 1342 aaPredicted RBP17.09■□□□□ 0.33
LINC00408-201ENST00000447784 NPHP4O75161 1426 aaPredicted RBP17.09■□□□□ 0.33
LINC00408-201ENST00000447784 ARHGAP23Q9P227 1491 aa17.09■□□□□ 0.33
LINC00408-201ENST00000447784 TET3O43151 1660 aa17.09■□□□□ 0.33
LINC00408-201ENST00000447784 SLIT1O75093 1534 aa17.08■□□□□ 0.32
LINC00408-201ENST00000447784 SYNMO15061 1565 aa17.07■□□□□ 0.32
LINC00408-201ENST00000447784 TMEM2Q9UHN6 1383 aa17.07■□□□□ 0.32
LINC00408-201ENST00000447784 EID1Q9Y6B2 187 aa17.07■□□□□ 0.32
LINC00408-201ENST00000447784 UBR1Q8IWV7 1749 aa17.07■□□□□ 0.32
LINC00408-201ENST00000447784 GCC2Q8IWJ2 1684 aa17.07■□□□□ 0.32
LINC00408-201ENST00000447784 IQGAP3Q86VI3 1631 aa17.07■□□□□ 0.32
LINC00408-201ENST00000447784 IQSEC2Q5JU85 1478 aa17.06■□□□□ 0.32
LINC00408-201ENST00000447784 TXNDC2Q86VQ3 553 aa17.06■□□□□ 0.32
LINC00408-201ENST00000447784 MPHOSPH9Q99550 1183 aa17.06■□□□□ 0.32
LINC00408-201ENST00000447784 SCAF11Q99590 1463 aaKnown RBP17.05■□□□□ 0.32
LINC00408-201ENST00000447784 LTKP29376 864 aa17.05■□□□□ 0.32
LINC00408-201ENST00000447784 POLR1AO95602 1720 aaPredicted RBP17.04■□□□□ 0.32
LINC00408-201ENST00000447784 PIK3C2BO00750 1634 aa17.04■□□□□ 0.32
LINC00408-201ENST00000447784 KDM5AP29375 1690 aaKnown RBP17.04■□□□□ 0.32
LINC00408-201ENST00000447784 MSH5O43196 834 aa17.02■□□□□ 0.32
LINC00408-201ENST00000447784 ADGRB3O60242 1522 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms