RNA–Protein interactions for RNA: ENST00000447394.1

HLA-DOB-207, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-207ENST00000447394 DEPDC5O75140 1603 aa20.14■□□□□ 0.81
HLA-DOB-207ENST00000447394 KIF3BO15066 747 aa20.12■□□□□ 0.81
HLA-DOB-207ENST00000447394 ANKRD50Q9ULJ7 1429 aa20.1■□□□□ 0.81
HLA-DOB-207ENST00000447394 NAIPQ13075 1403 aa20.1■□□□□ 0.81
HLA-DOB-207ENST00000447394 PRDM15P57071 1507 aaPredicted RBP20.09■□□□□ 0.81
HLA-DOB-207ENST00000447394 GGT6Q6P531 493 aa20.09■□□□□ 0.81
HLA-DOB-207ENST00000447394 UNC13BO14795 1591 aa20.08■□□□□ 0.81
HLA-DOB-207ENST00000447394 C3P01024 1663 aa20.07■□□□□ 0.8
HLA-DOB-207ENST00000447394 HFM1A2PYH4 1435 aa20.07■□□□□ 0.8
HLA-DOB-207ENST00000447394 MROH2AA6NES4 1674 aa20.06■□□□□ 0.8
HLA-DOB-207ENST00000447394 ZC3H13Q5T200 1668 aaKnown RBP20.05■□□□□ 0.8
HLA-DOB-207ENST00000447394 KDM5DQ9BY66 1539 aa20.05■□□□□ 0.8
HLA-DOB-207ENST00000447394 ABCC3O15438 1527 aa20.04■□□□□ 0.8
HLA-DOB-207ENST00000447394 CAMSAP1Q5T5Y3 1602 aa20.04■□□□□ 0.8
HLA-DOB-207ENST00000447394 PTPRMP28827 1452 aa20.03■□□□□ 0.8
HLA-DOB-207ENST00000447394 PLPPR3Q6T4P5 718 aa20.02■□□□□ 0.8
HLA-DOB-207ENST00000447394 VWDEQ8N2E2 1590 aa20.02■□□□□ 0.8
HLA-DOB-207ENST00000447394 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.01■□□□□ 0.79
HLA-DOB-207ENST00000447394 IQGAP3Q86VI3 1631 aa19.99■□□□□ 0.79
HLA-DOB-207ENST00000447394 CFAP65Q6ZU64 1925 aaKnown RBP19.99■□□□□ 0.79
HLA-DOB-207ENST00000447394 FAM135AQ9P2D6 1515 aa19.97■□□□□ 0.79
HLA-DOB-207ENST00000447394 CEBPAP49715 358 aaPredicted RBP19.97■□□□□ 0.79
HLA-DOB-207ENST00000447394 CNTLNQ9NXG0 1405 aa19.96■□□□□ 0.79
HLA-DOB-207ENST00000447394 TET3O43151 1660 aa19.95■□□□□ 0.78
HLA-DOB-207ENST00000447394 ESF1Q9H501 851 aaKnown RBP19.95■□□□□ 0.78
HLA-DOB-207ENST00000447394 WASHC2CQ9Y4E1 1318 aa19.95■□□□□ 0.78
HLA-DOB-207ENST00000447394 SETD5Q9C0A6 1442 aa19.93■□□□□ 0.78
HLA-DOB-207ENST00000447394 EFCAB6Q5THR3 1501 aa19.93■□□□□ 0.78
HLA-DOB-207ENST00000447394 E9PCH4 1651 aa19.93■□□□□ 0.78
HLA-DOB-207ENST00000447394 LMTK2Q8IWU2 1503 aa19.92■□□□□ 0.78
HLA-DOB-207ENST00000447394 PREX1Q8TCU6 1659 aa19.92■□□□□ 0.78
HLA-DOB-207ENST00000447394 TRIM26Q12899 539 aaPredicted RBP19.92■□□□□ 0.78
HLA-DOB-207ENST00000447394 ZMYM3Q14202 1370 aa19.92■□□□□ 0.78
HLA-DOB-207ENST00000447394 KANK1Q14678 1352 aa19.92■□□□□ 0.78
HLA-DOB-207ENST00000447394 RAB3GAP2Q9H2M9 1393 aa19.92■□□□□ 0.78
HLA-DOB-207ENST00000447394 NUP155O75694 1391 aa19.9■□□□□ 0.78
HLA-DOB-207ENST00000447394 PZPP20742 1482 aa19.89■□□□□ 0.77
HLA-DOB-207ENST00000447394 PPP6R1Q9UPN7 881 aa19.89■□□□□ 0.77
HLA-DOB-207ENST00000447394 MYO3AQ8NEV4 1616 aa19.87■□□□□ 0.77
HLA-DOB-207ENST00000447394 NPATQ14207 1427 aa19.86■□□□□ 0.77
HLA-DOB-207ENST00000447394 FBXO31Q5XUX0 539 aaPredicted RBP19.86■□□□□ 0.77
HLA-DOB-207ENST00000447394 TRIM52Q96A61 297 aa19.86■□□□□ 0.77
HLA-DOB-207ENST00000447394 ERVK-7P63135 1459 aa19.85■□□□□ 0.77
HLA-DOB-207ENST00000447394 SPATA31D1Q6ZQQ2 1576 aa19.84■□□□□ 0.77
HLA-DOB-207ENST00000447394 SYNMO15061 1565 aa19.83■□□□□ 0.77
HLA-DOB-207ENST00000447394 AEBP2Q6ZN18 517 aaPredicted RBP19.83■□□□□ 0.77
HLA-DOB-207ENST00000447394 SPHKAPQ2M3C7 1700 aa19.82■□□□□ 0.76
HLA-DOB-207ENST00000447394 ARHGAP31Q2M1Z3 1444 aa19.82■□□□□ 0.76
HLA-DOB-207ENST00000447394 ZNF142P52746 1687 aaPredicted RBP19.8■□□□□ 0.76
HLA-DOB-207ENST00000447394 SETD1BQ9UPS6 1966 aaKnown RBP19.79■□□□□ 0.76
HLA-DOB-207ENST00000447394 UGGT1Q9NYU2 1555 aa19.78■□□□□ 0.76
HLA-DOB-207ENST00000447394 TNRQ92752 1358 aa19.77■□□□□ 0.76
HLA-DOB-207ENST00000447394 RPRD2Q5VT52 1461 aaKnown RBP19.77■□□□□ 0.76
HLA-DOB-207ENST00000447394 LMTK3Q96Q04 1460 aa19.77■□□□□ 0.76
HLA-DOB-207ENST00000447394 CEP170BQ9Y4F5 1589 aaPredicted RBP19.76■□□□□ 0.75
HLA-DOB-207ENST00000447394 PCGF6Q9BYE7 350 aa19.76■□□□□ 0.75
HLA-DOB-207ENST00000447394 MYO5BQ9ULV0 1848 aa19.76■□□□□ 0.75
HLA-DOB-207ENST00000447394 PIK3C2BO00750 1634 aa19.76■□□□□ 0.75
HLA-DOB-207ENST00000447394 NOS1P29475 1434 aa19.75■□□□□ 0.75
HLA-DOB-207ENST00000447394 FOXD1Q16676 465 aa19.74■□□□□ 0.75
HLA-DOB-207ENST00000447394 SLC4A1APQ9BWU0 796 aaKnown RBP19.74■□□□□ 0.75
HLA-DOB-207ENST00000447394 PKD2Q13563 968 aa19.73■□□□□ 0.75
HLA-DOB-207ENST00000447394 UHRF1BP1Q6BDS2 1440 aa19.73■□□□□ 0.75
HLA-DOB-207ENST00000447394 CLTCL1P53675 1640 aa19.73■□□□□ 0.75
HLA-DOB-207ENST00000447394 UBR1Q8IWV7 1749 aa19.72■□□□□ 0.75
HLA-DOB-207ENST00000447394 MPHOSPH9Q99550 1183 aa19.71■□□□□ 0.75
HLA-DOB-207ENST00000447394 TRPM2O94759 1503 aa19.7■□□□□ 0.74
HLA-DOB-207ENST00000447394 A2ML1A8K2U0 1454 aa19.69■□□□□ 0.74
HLA-DOB-207ENST00000447394 PLA2R1Q13018 1463 aa19.69■□□□□ 0.74
HLA-DOB-207ENST00000447394 PTPRTO14522 1441 aa19.68■□□□□ 0.74
HLA-DOB-207ENST00000447394 NLRP1Q9C000 1473 aa19.67■□□□□ 0.74
HLA-DOB-207ENST00000447394 HSPA2P54652 639 aa19.67■□□□□ 0.74
HLA-DOB-207ENST00000447394 HRCP23327 699 aa19.66■□□□□ 0.74
HLA-DOB-207ENST00000447394 ADGRB3O60242 1522 aa19.66■□□□□ 0.74
HLA-DOB-207ENST00000447394 TMEM131LA2VDJ0 1609 aa19.64■□□□□ 0.73
HLA-DOB-207ENST00000447394 KIF1BO60333 1816 aa19.64■□□□□ 0.73
HLA-DOB-207ENST00000447394 STRCQ7RTU9 1775 aa19.62■□□□□ 0.73
HLA-DOB-207ENST00000447394 KDM5AP29375 1690 aaKnown RBP19.62■□□□□ 0.73
HLA-DOB-207ENST00000447394 IDI1Q13907 227 aa19.62■□□□□ 0.73
HLA-DOB-207ENST00000447394 POLR1AO95602 1720 aaPredicted RBP19.62■□□□□ 0.73
HLA-DOB-207ENST00000447394 ACIN1Q9UKV3 1341 aaKnown RBP19.6■□□□□ 0.73
HLA-DOB-207ENST00000447394 DHX57Q6P158 1386 aaKnown RBP19.58■□□□□ 0.73
HLA-DOB-207ENST00000447394 CHGAP10645 457 aaKnown RBP19.55■□□□□ 0.72
HLA-DOB-207ENST00000447394 NEURL4Q96JN8 1562 aa19.55■□□□□ 0.72
HLA-DOB-207ENST00000447394 SLC52A1Q9NWF4 448 aa19.55■□□□□ 0.72
HLA-DOB-207ENST00000447394 ANKRD30BQ9BXX2 1392 aa19.55■□□□□ 0.72
HLA-DOB-207ENST00000447394 CCDC144AA2RUR9 1427 aa19.54■□□□□ 0.72
HLA-DOB-207ENST00000447394 SLIT1O75093 1534 aa19.52■□□□□ 0.72
HLA-DOB-207ENST00000447394 STAG3Q9UJ98 1225 aa19.52■□□□□ 0.72
HLA-DOB-207ENST00000447394 ARHGAP23Q9P227 1491 aa19.52■□□□□ 0.72
HLA-DOB-207ENST00000447394 IFT172Q9UG01 1749 aa19.51■□□□□ 0.71
HLA-DOB-207ENST00000447394 NCKAP5LQ9HCH0 1330 aa19.51■□□□□ 0.71
HLA-DOB-207ENST00000447394 PPLO60437 1756 aa19.5■□□□□ 0.71
HLA-DOB-207ENST00000447394 NEXMIFQ5QGS0 1516 aa19.49■□□□□ 0.71
HLA-DOB-207ENST00000447394 TMEM2Q9UHN6 1383 aa19.48■□□□□ 0.71
HLA-DOB-207ENST00000447394 THEMISQ8N1K5 641 aaPredicted RBP19.48■□□□□ 0.71
HLA-DOB-207ENST00000447394 ZFYVE9O95405 1425 aa19.48■□□□□ 0.71
HLA-DOB-207ENST00000447394 IQGAP1P46940 1657 aa19.47■□□□□ 0.71
HLA-DOB-207ENST00000447394 SENP3Q9H4L4 574 aaPredicted RBP19.47■□□□□ 0.71
HLA-DOB-207ENST00000447394 SPATA31E1Q6ZUB1 1445 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms